Click here to switch to the map view.

The map label for this gene is 226223232

Identifier: 226223232

GI number: 226223232

Start: 646602

End: 646988

Strand: Reverse

Name: 226223232

Synonym: Lm4b_00629

Alternate gene names: NA

Gene position: 646988-646602 (Counterclockwise)

Preceding gene: 226223233

Following gene: 226223227

Centisome position: 22.21

GC content: 39.02

Gene sequence:

>387_bases
ATGCGTTTTATTATTGCTTATTTATCGATTTTTGTTTTAGGAATTTTTTCTGCGCTTTTAGTCGAAACAATCCTCTATGA
CAACGTTACGCCACAGCTTGTGTTTTCAGCGATACTTTTTGCAGCTCCTGTAATTTTAGTTGCTTCTACGTTAGGCGAAA
TTTTTTACGGGTTTAGCAAAAAAGCTAGTTACTTCACATTTGCTATATGGGGCTTCGCTTACGGGGTTGTTGCAGCAGTC
ATCATTTTAAGTATTATCCAAGTTTCTGGTATGCTCATTTCTGTTGGCGTATCCATTCTCGCAGGAGTTATCATGGCGCT
ACTTGCCATCATCTTCTTCTTTTTACGCGGTGGAAAATCTACCAGTGGAAAAGCCGCTACGAAATAA

Upstream 100 bases:

>100_bases
ATTACACGTATCGTAAAGCATAGTGACGATAATTGGGCTAGATGTTAAGCTAACTTCCTAATTTATGCTATAATATAGTG
TACTTTAGGAGGTTTTTTTG

Downstream 100 bases:

>100_bases
AAAAATGTCTATCCTAATTGATTCATTCAACTAGAATAGACATTTTTTTATTCTTCTTCAAACGCATGATGATTCAAATT
AAAACGAATTGTCTCCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MRFIIAYLSIFVLGIFSALLVETILYDNVTPQLVFSAILFAAPVILVASTLGEIFYGFSKKASYFTFAIWGFAYGVVAAV
IILSIIQVSGMLISVGVSILAGVIMALLAIIFFFLRGGKSTSGKAATK

Sequences:

>Translated_128_residues
MRFIIAYLSIFVLGIFSALLVETILYDNVTPQLVFSAILFAAPVILVASTLGEIFYGFSKKASYFTFAIWGFAYGVVAAV
IILSIIQVSGMLISVGVSILAGVIMALLAIIFFFLRGGKSTSGKAATK
>Mature_128_residues
MRFIIAYLSIFVLGIFSALLVETILYDNVTPQLVFSAILFAAPVILVASTLGEIFYGFSKKASYFTFAIWGFAYGVVAAV
IILSIIQVSGMLISVGVSILAGVIMALLAIIFFFLRGGKSTSGKAATK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13658; Mature: 13658

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFIIAYLSIFVLGIFSALLVETILYDNVTPQLVFSAILFAAPVILVASTLGEIFYGFSK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KASYFTFAIWGFAYGVVAAVIILSIIQVSGMLISVGVSILAGVIMALLAIIFFFLRGGKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TSGKAATK
CCCCCCCC
>Mature Secondary Structure
MRFIIAYLSIFVLGIFSALLVETILYDNVTPQLVFSAILFAAPVILVASTLGEIFYGFSK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KASYFTFAIWGFAYGVVAAVIILSIIQVSGMLISVGVSILAGVIMALLAIIFFFLRGGKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TSGKAATK
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA