| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223064
Identifier: 226223064
GI number: 226223064
Start: 469034
End: 469732
Strand: Direct
Name: 226223064
Synonym: Lm4b_00460
Alternate gene names: NA
Gene position: 469034-469732 (Clockwise)
Preceding gene: 226223063
Following gene: 226223065
Centisome position: 16.1
GC content: 34.76
Gene sequence:
>699_bases ATGCTAAAAAAAACGAAAAAAAATCTCAATGAAATTAAAACTATTATCCAGCAAAAACCTTTTGATTATGAGAAGGCAGA AAATTTGATAAGTGAGTTAAATCTTGAAGAGGCCCTACTAGAATTGGAGAACATCTTACTAGCTAGCATAAATAATAGCG ATGAGAACGCTCGAATATTTGCCTATGAGTATTTATATTATTTTGATAGCGAAGCAGTTTTTCAAGCAGCCCTCATAGGG ACAACGGACGACGATGATTTAGTTCAAATGTGCTCCATAGAGATTTTAGGAAATTTGGTTAAAGTAGAAAGTCTCCCGTA TTTAAAGAAGGCGTTGGGCGATAACAACCCTGATGTACGTTGCTTTGCTGCTGAATCAATCGGTTTTGTAGGGACTGACG AAGCGAAAGCGATACTGCAAGAACAGTTAAATAGAGAAACGGATTCTTTTGCAAAAGTAGGTATTTATTATGCGCTCTAT CTTCTTGGTCGAGAAGAAATGTTGCCAAAGCTCCTTTCTCTACTAGACGATAATTATCATTTGACGGTGATTAGAAGCTT GGATGTTCTGAGAGACGTTGTTAATCAAACAAATAAAGAAAATATATTATTAAATATCGAAAAACTTTTAAAGAGAGATA TCCCAATTTCAGTAAAGGAAAAAGCGGAAGTGGTTTTACAAGAAATTAAAGGAAGCTAA
Upstream 100 bases:
>100_bases AAATTGCAGGGCGAATGAAGAGGTGGAAAAAGAAAGCTTTCTGAAGAAGATTGTGCGCAGGTGGAAGCAACGATGAGAAT CCATTTGGAGGTGTGAGTAT
Downstream 100 bases:
>100_bases AACAGAATAAATATTGTTATGTTCCACTGGAAAAAAAGGTGATTTTTATAGCAAAACTAGTAAAAGCTAAAATTTTTATT CATGATATAAAGATTAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MLKKTKKNLNEIKTIIQQKPFDYEKAENLISELNLEEALLELENILLASINNSDENARIFAYEYLYYFDSEAVFQAALIG TTDDDDLVQMCSIEILGNLVKVESLPYLKKALGDNNPDVRCFAAESIGFVGTDEAKAILQEQLNRETDSFAKVGIYYALY LLGREEMLPKLLSLLDDNYHLTVIRSLDVLRDVVNQTNKENILLNIEKLLKRDIPISVKEKAEVVLQEIKGS
Sequences:
>Translated_232_residues MLKKTKKNLNEIKTIIQQKPFDYEKAENLISELNLEEALLELENILLASINNSDENARIFAYEYLYYFDSEAVFQAALIG TTDDDDLVQMCSIEILGNLVKVESLPYLKKALGDNNPDVRCFAAESIGFVGTDEAKAILQEQLNRETDSFAKVGIYYALY LLGREEMLPKLLSLLDDNYHLTVIRSLDVLRDVVNQTNKENILLNIEKLLKRDIPISVKEKAEVVLQEIKGS >Mature_232_residues MLKKTKKNLNEIKTIIQQKPFDYEKAENLISELNLEEALLELENILLASINNSDENARIFAYEYLYYFDSEAVFQAALIG TTDDDDLVQMCSIEILGNLVKVESLPYLKKALGDNNPDVRCFAAESIGFVGTDEAKAILQEQLNRETDSFAKVGIYYALY LLGREEMLPKLLSLLDDNYHLTVIRSLDVLRDVVNQTNKENILLNIEKLLKRDIPISVKEKAEVVLQEIKGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26396; Mature: 26396
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKTKKNLNEIKTIIQQKPFDYEKAENLISELNLEEALLELENILLASINNSDENARIF CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEE AYEYLYYFDSEAVFQAALIGTTDDDDLVQMCSIEILGNLVKVESLPYLKKALGDNNPDVR EEEEHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEE CFAAESIGFVGTDEAKAILQEQLNRETDSFAKVGIYYALYLLGREEMLPKLLSLLDDNYH EEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LTVIRSLDVLRDVVNQTNKENILLNIEKLLKRDIPISVKEKAEVVLQEIKGS EEHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MLKKTKKNLNEIKTIIQQKPFDYEKAENLISELNLEEALLELENILLASINNSDENARIF CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEE AYEYLYYFDSEAVFQAALIGTTDDDDLVQMCSIEILGNLVKVESLPYLKKALGDNNPDVR EEEEHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEE CFAAESIGFVGTDEAKAILQEQLNRETDSFAKVGIYYALYLLGREEMLPKLLSLLDDNYH EEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LTVIRSLDVLRDVVNQTNKENILLNIEKLLKRDIPISVKEKAEVVLQEIKGS EEHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA