| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is 226223063
Identifier: 226223063
GI number: 226223063
Start: 468422
End: 469009
Strand: Direct
Name: 226223063
Synonym: Lm4b_00459
Alternate gene names: NA
Gene position: 468422-469009 (Clockwise)
Preceding gene: 226223062
Following gene: 226223064
Centisome position: 16.08
GC content: 35.2
Gene sequence:
>588_bases ATGATAAACCTAGAATGGAAAGAACTAGACCAACTGGAGATAGAAGAAAAGGTTCAAGAGGTATTAGATTATAGCTATAA TACCTGGATGTCTGATAAGAAGAATATTCGTTATTTTGTACGGGCGTTTTATATTAGATGGGATATGTTGGTTGATATGT ATGAAGTGGAAGATGATGAGACGGAAGGCGATAAGTTAAAATATATGTATGATTTCGGCATTAGCGAGCTGGGAAATATT ACAGAGGTTGACTGGATAATGGGTTATTGCATGCTAATTAATCCAATCTATTTTGAAGAAAATGATAATTATTTGGAACT TGAGGAGAAAGGGCAGGAAATGCTTCGTAATGTAGCAATAAATAACCCGGATGACGTCTTTTTGACTTCTTTTGGTATAC CTGAAAAAGATTATTTGAAATGGAAAATAGCGAACAGAGAGCAACTTATTCAGTACGGGGAAGATAATTTTAGCTATGAC TCAGAGTTTTCGAGATATTTTAAACATATTATAAATTGCAGGGCGAATGAAGAGGTGGAAAAAGAAAGCTTTCTGAAGAA GATTGTGCGCAGGTGGAAGCAACGATGA
Upstream 100 bases:
>100_bases TGCTTATCTCGGGGTTTATGTCGGATTGTTGGGCTAAGGGATTTGTGAAAAAGAGGCGGAATAAACGAAGTCCAAAGCAT ACACAGAAAAGAGGGCTGTT
Downstream 100 bases:
>100_bases GAATCCATTTGGAGGTGTGAGTATATGCTAAAAAAAACGAAAAAAAATCTCAATGAAATTAAAACTATTATCCAGCAAAA ACCTTTTGATTATGAGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MINLEWKELDQLEIEEKVQEVLDYSYNTWMSDKKNIRYFVRAFYIRWDMLVDMYEVEDDETEGDKLKYMYDFGISELGNI TEVDWIMGYCMLINPIYFEENDNYLELEEKGQEMLRNVAINNPDDVFLTSFGIPEKDYLKWKIANREQLIQYGEDNFSYD SEFSRYFKHIINCRANEEVEKESFLKKIVRRWKQR
Sequences:
>Translated_195_residues MINLEWKELDQLEIEEKVQEVLDYSYNTWMSDKKNIRYFVRAFYIRWDMLVDMYEVEDDETEGDKLKYMYDFGISELGNI TEVDWIMGYCMLINPIYFEENDNYLELEEKGQEMLRNVAINNPDDVFLTSFGIPEKDYLKWKIANREQLIQYGEDNFSYD SEFSRYFKHIINCRANEEVEKESFLKKIVRRWKQR >Mature_195_residues MINLEWKELDQLEIEEKVQEVLDYSYNTWMSDKKNIRYFVRAFYIRWDMLVDMYEVEDDETEGDKLKYMYDFGISELGNI TEVDWIMGYCMLINPIYFEENDNYLELEEKGQEMLRNVAINNPDDVFLTSFGIPEKDYLKWKIANREQLIQYGEDNFSYD SEFSRYFKHIINCRANEEVEKESFLKKIVRRWKQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23909; Mature: 23909
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLEWKELDQLEIEEKVQEVLDYSYNTWMSDKKNIRYFVRAFYIRWDMLVDMYEVEDDE CCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC TEGDKLKYMYDFGISELGNITEVDWIMGYCMLINPIYFEENDNYLELEEKGQEMLRNVAI CCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHHHHCC NNPDDVFLTSFGIPEKDYLKWKIANREQLIQYGEDNFSYDSEFSRYFKHIINCRANEEVE CCCCCEEEEECCCCCCHHEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHH KESFLKKIVRRWKQR HHHHHHHHHHHHHCC >Mature Secondary Structure MINLEWKELDQLEIEEKVQEVLDYSYNTWMSDKKNIRYFVRAFYIRWDMLVDMYEVEDDE CCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC TEGDKLKYMYDFGISELGNITEVDWIMGYCMLINPIYFEENDNYLELEEKGQEMLRNVAI CCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHHHHCC NNPDDVFLTSFGIPEKDYLKWKIANREQLIQYGEDNFSYDSEFSRYFKHIINCRANEEVE CCCCCEEEEECCCCCCHHEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHH KESFLKKIVRRWKQR HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA