| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is mngB [H]
Identifier: 226223055
GI number: 226223055
Start: 453431
End: 456013
Strand: Direct
Name: mngB [H]
Synonym: Lm4b_00449
Alternate gene names: 226223055
Gene position: 453431-456013 (Clockwise)
Preceding gene: 226223054
Following gene: 226223057
Centisome position: 15.57
GC content: 41.81
Gene sequence:
>2583_bases ATGGTTAAAGCACATATTGTGAACCATACGCATTGGGACCGAGAGTGGTATTTTACCTCGGCCGATGCACTGGTTCTAAG TGAACAACTTTTTACAGAAGTAATTGACGAATTAAAAAAGCACCCAGAAGCAAACTTTGTACTTGATGGGCAACTGTCGA TTTTAGATGATTATGTCGCACTGTACCCGGAAAAATTAGCGGATATTAAGCAATTAATTGCGGATAAACAACTTTTCATT GGACCGTGGTTTACGCAAACAGATGCCTTTTTCGCGCATGGTGAGTCGATTTTGCGCAATGCGATGATTGGGATTTTTGA TAGTAAAAAATACGGCGACTATATGGAAATTGGTTATTTGCCAGATACATTTGGTTTTAATGCCCAAATGCCGACTTTAC TTGAACATGCTGGCTTTGATAATGTGATTTTCTGGCGTGGGATTCATCTTGGTGAACATGTTGCGTCTCCATATTTTAAA TGGCAAGGACTTGGAGAAGAAGCGTCGATTTATGCGATTAATATGCCACAAGGTTACGGCACAGGGATGCTCCTTGAACC AACCTCGGCATATGTGGATGGACGCCTCGACCCGGCAATTGATTTCATTGAAAAGTACAGTAAAACAACTGAAGTTTTAA TTCCATCTGGGAATGATCAGCTGAATATTATTAGTAACTTTGCCGAAAAATTAGTGGAAATCAACAAGATGGGACGCCAT GATTATCAACTTAGTACCTATCAAGATTTTATTCAATATGTTAGAGAGCTGCCTGACTTAGAAGAATATCGCGGGGAATT TAGAAGTCCGGTTCTTGCGCGAGTGCATAAAACCATTGGATCTAGCCGAATGAATATTAAGCTAAAAAGCGCGTCACTCG AGCAAAAATTGCTAACACGTATTGAGCCACTTCTTGTTATTGCTAAAGCATCTGGAATTTCTATTAGCGAGCGTTTACTA ATGCATACGTGGAAGAAACTTTTAGAAGGTCAAGCGCATGATAGCTTGGCGGGCTGCGTTTCTGATCCAGTTGCCGAAGA TATTTTGCACCGGATGAAAGAAGCCGACGAACTATGCGATAGTATCGAAAACACGATTGTGAAGAAAATTGCCGATGATT TGTCACTTGCGGCGAACGAAATTATCGTTTTTAACACGGATTCACATGATTTTGACGGATGTAAGGAAATACAAGTAGTA ACCGAGCATAAAAACATCCATTTCCCAGCGTTTCCGGACGCAACGATTGTCCAAGAAGAGTTCATTCCATCGCGCGAAAA TGTGCTAGAAGAAACGCCAGCTGGGAATCGATTTATTGAAGAACCTGGCTACTATGTGCTTCAAGTGCGCGTCAAAGTGG AGCTTCCAGGCCTTGGCTACCGGGTGATTGCTTTTGAAGAGAATGACCGCGAACTGGATTCGATGATTGCTTCCAATGAT GTGGCAATCACGAATGATTTCTACAAAATCACTTTTGAAAATGGTGAAATTGCTCTTGAAAAACCAAACGGCGAGCGCAT CACTTCTTTTATTACGCTAGAAGATGATGTGAATGCAGGCGATACGTATGATTATTCACCACTAGCCGGAGATATCGCGG AATTATTCACTTTTTCCGAAGCAAAAACGGAGAAATCAAGTGAAGTCGAACGTTTAATTTTAACAGGAAAAAGCGATTTC CCGCTTGATCGTTTGGCGAAAGAAGGGCATGGCGACCTGCAAATCAAACTCATTTTAGAGGTGAAAAAAGGTAGCGAACT GCTGGTTGTTAATGTTGAAGTAGATAACCAAATTAAAAGTCACCGTCTACGCTTAAAAGTAAATACAGGTGTGAAAACAG ACTACAACATCGCGTCACTACCATTCGGATATATCGAGAGAAAACCAGTTGTACCAGTGAATTGGCGAGAAACATATAGC GAAATGCCAATCGACATCGAACCACTGGAACAAAGCGTGACGCTAACAAATGAAGCAGAAAGTTGTACCATTTTCACACA GGGCATCAAAGAATACCAACAATTGGATCAATATTTAGCACTGACGCTACTGGCAACAACCGGACAACTCGGAAAACCTG ATTTAGCATACCGGCCAGGCCGAGCATCAGGCGACACAACGAAAAAAGGTCACGTGCTCATCGAAACAGAAGGTGCGCAG TTACTAGGCAAACATGAATTTTCATTAGCCATCTATCTTGGCGACCAAGCTTTCGACGAACATAAAACCGCTGAACGAAC AAAAGCGTTCAACCAAGCAAACGTGTCTTACCAGCGTCAACCATTCAACCACTTTTTACATCGCTTGGATAACAAAATCC AGAAAACAGAACGGAAATTAGGCGCGAAGCAAACGTTAGGTATGTTGAATTTGCCGAAAGAATACTTAGTTTCAGCGTGC CACCCGTCCTACTACTCAGCAGATAAATACATTATCCGCCTGGAAAACCCAACTAACACACCACAAAAGTTGGCACTCTC GGATATGTCGTTTGAGTATGTGAATGCTATCGAAGAAGTTGTTGCAAATGACAACAACACGATTCCAGCATATGGCGCTG TTACGTTACGATTAGAAATATAG
Upstream 100 bases:
>100_bases CGCTTTACGTAAAGCAAGTGCTGGCGAGGAAATGGCTGGTTCAAGCTACGATGACGAAATTGACGAAGCAGAATGGGAAG CTTAAAAAACGGAGGTAACT
Downstream 100 bases:
>100_bases AAAGAAAACTTGCTCAAAGTATTTATTTTGAGCAAGTTTTTTGTATTAATCGTAAAAATTCCTTCGAAGCACTGGAGAAA GTTTGATTCTTCTTCCACAC
Product: sugar hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 860; Mature: 860
Protein sequence:
>860_residues MVKAHIVNHTHWDREWYFTSADALVLSEQLFTEVIDELKKHPEANFVLDGQLSILDDYVALYPEKLADIKQLIADKQLFI GPWFTQTDAFFAHGESILRNAMIGIFDSKKYGDYMEIGYLPDTFGFNAQMPTLLEHAGFDNVIFWRGIHLGEHVASPYFK WQGLGEEASIYAINMPQGYGTGMLLEPTSAYVDGRLDPAIDFIEKYSKTTEVLIPSGNDQLNIISNFAEKLVEINKMGRH DYQLSTYQDFIQYVRELPDLEEYRGEFRSPVLARVHKTIGSSRMNIKLKSASLEQKLLTRIEPLLVIAKASGISISERLL MHTWKKLLEGQAHDSLAGCVSDPVAEDILHRMKEADELCDSIENTIVKKIADDLSLAANEIIVFNTDSHDFDGCKEIQVV TEHKNIHFPAFPDATIVQEEFIPSRENVLEETPAGNRFIEEPGYYVLQVRVKVELPGLGYRVIAFEENDRELDSMIASND VAITNDFYKITFENGEIALEKPNGERITSFITLEDDVNAGDTYDYSPLAGDIAELFTFSEAKTEKSSEVERLILTGKSDF PLDRLAKEGHGDLQIKLILEVKKGSELLVVNVEVDNQIKSHRLRLKVNTGVKTDYNIASLPFGYIERKPVVPVNWRETYS EMPIDIEPLEQSVTLTNEAESCTIFTQGIKEYQQLDQYLALTLLATTGQLGKPDLAYRPGRASGDTTKKGHVLIETEGAQ LLGKHEFSLAIYLGDQAFDEHKTAERTKAFNQANVSYQRQPFNHFLHRLDNKIQKTERKLGAKQTLGMLNLPKEYLVSAC HPSYYSADKYIIRLENPTNTPQKLALSDMSFEYVNAIEEVVANDNNTIPAYGAVTLRLEI
Sequences:
>Translated_860_residues MVKAHIVNHTHWDREWYFTSADALVLSEQLFTEVIDELKKHPEANFVLDGQLSILDDYVALYPEKLADIKQLIADKQLFI GPWFTQTDAFFAHGESILRNAMIGIFDSKKYGDYMEIGYLPDTFGFNAQMPTLLEHAGFDNVIFWRGIHLGEHVASPYFK WQGLGEEASIYAINMPQGYGTGMLLEPTSAYVDGRLDPAIDFIEKYSKTTEVLIPSGNDQLNIISNFAEKLVEINKMGRH DYQLSTYQDFIQYVRELPDLEEYRGEFRSPVLARVHKTIGSSRMNIKLKSASLEQKLLTRIEPLLVIAKASGISISERLL MHTWKKLLEGQAHDSLAGCVSDPVAEDILHRMKEADELCDSIENTIVKKIADDLSLAANEIIVFNTDSHDFDGCKEIQVV TEHKNIHFPAFPDATIVQEEFIPSRENVLEETPAGNRFIEEPGYYVLQVRVKVELPGLGYRVIAFEENDRELDSMIASND VAITNDFYKITFENGEIALEKPNGERITSFITLEDDVNAGDTYDYSPLAGDIAELFTFSEAKTEKSSEVERLILTGKSDF PLDRLAKEGHGDLQIKLILEVKKGSELLVVNVEVDNQIKSHRLRLKVNTGVKTDYNIASLPFGYIERKPVVPVNWRETYS EMPIDIEPLEQSVTLTNEAESCTIFTQGIKEYQQLDQYLALTLLATTGQLGKPDLAYRPGRASGDTTKKGHVLIETEGAQ LLGKHEFSLAIYLGDQAFDEHKTAERTKAFNQANVSYQRQPFNHFLHRLDNKIQKTERKLGAKQTLGMLNLPKEYLVSAC HPSYYSADKYIIRLENPTNTPQKLALSDMSFEYVNAIEEVVANDNNTIPAYGAVTLRLEI >Mature_860_residues MVKAHIVNHTHWDREWYFTSADALVLSEQLFTEVIDELKKHPEANFVLDGQLSILDDYVALYPEKLADIKQLIADKQLFI GPWFTQTDAFFAHGESILRNAMIGIFDSKKYGDYMEIGYLPDTFGFNAQMPTLLEHAGFDNVIFWRGIHLGEHVASPYFK WQGLGEEASIYAINMPQGYGTGMLLEPTSAYVDGRLDPAIDFIEKYSKTTEVLIPSGNDQLNIISNFAEKLVEINKMGRH DYQLSTYQDFIQYVRELPDLEEYRGEFRSPVLARVHKTIGSSRMNIKLKSASLEQKLLTRIEPLLVIAKASGISISERLL MHTWKKLLEGQAHDSLAGCVSDPVAEDILHRMKEADELCDSIENTIVKKIADDLSLAANEIIVFNTDSHDFDGCKEIQVV TEHKNIHFPAFPDATIVQEEFIPSRENVLEETPAGNRFIEEPGYYVLQVRVKVELPGLGYRVIAFEENDRELDSMIASND VAITNDFYKITFENGEIALEKPNGERITSFITLEDDVNAGDTYDYSPLAGDIAELFTFSEAKTEKSSEVERLILTGKSDF PLDRLAKEGHGDLQIKLILEVKKGSELLVVNVEVDNQIKSHRLRLKVNTGVKTDYNIASLPFGYIERKPVVPVNWRETYS EMPIDIEPLEQSVTLTNEAESCTIFTQGIKEYQQLDQYLALTLLATTGQLGKPDLAYRPGRASGDTTKKGHVLIETEGAQ LLGKHEFSLAIYLGDQAFDEHKTAERTKAFNQANVSYQRQPFNHFLHRLDNKIQKTERKLGAKQTLGMLNLPKEYLVSAC HPSYYSADKYIIRLENPTNTPQKLALSDMSFEYVNAIEEVVANDNNTIPAYGAVTLRLEI
Specific function: May hydrolyze mannosyl-D-glycerate to mannose-6- phosphate and glycerate [H]
COG id: COG0383
COG function: function code G; Alpha-mannosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 38 family [H]
Homologues:
Organism=Escherichia coli, GI1786952, Length=732, Percent_Identity=31.1475409836066, Blast_Score=340, Evalue=2e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011013 - InterPro: IPR011330 - InterPro: IPR011682 - InterPro: IPR015341 - InterPro: IPR000602 [H]
Pfam domain/function: PF09261 Alpha-mann_mid; PF01074 Glyco_hydro_38; PF07748 Glyco_hydro_38C [H]
EC number: NA
Molecular weight: Translated: 97271; Mature: 97271
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKAHIVNHTHWDREWYFTSADALVLSEQLFTEVIDELKKHPEANFVLDGQLSILDDYVA CEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHH LYPEKLADIKQLIADKQLFIGPWFTQTDAFFAHGESILRNAMIGIFDSKKYGDYMEIGYL HCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHCCHHHHHHHHHEEECCCCCCCEEEECCC PDTFGFNAQMPTLLEHAGFDNVIFWRGIHLGEHVASPYFKWQGLGEEASIYAINMPQGYG CCCCCCCCCCCHHHHHCCCCCEEEEECCCCHHHHCCCCCEECCCCCCCEEEEEECCCCCC TGMLLEPTSAYVDGRLDPAIDFIEKYSKTTEVLIPSGNDQLNIISNFAEKLVEINKMGRH CCEEECCCHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCC DYQLSTYQDFIQYVRELPDLEEYRGEFRSPVLARVHKTIGSSRMNIKLKSASLEQKLLTR CCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHH IEPLLVIAKASGISISERLLMHTWKKLLEGQAHDSLAGCVSDPVAEDILHRMKEADELCD HCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHH SIENTIVKKIADDLSLAANEIIVFNTDSHDFDGCKEIQVVTEHKNIHFPAFPDATIVQEE HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCEECCCCCCCHHHHHH FIPSRENVLEETPAGNRFIEEPGYYVLQVRVKVELPGLGYRVIAFEENDRELDSMIASND CCCCHHHHHHCCCCCCCEECCCCEEEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHCCC VAITNDFYKITFENGEIALEKPNGERITSFITLEDDVNAGDTYDYSPLAGDIAELFTFSE EEEECCEEEEEEECCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH AKTEKSSEVERLILTGKSDFPLDRLAKEGHGDLQIKLILEVKKGSELLVVNVEVDNQIKS HHCCCHHHHHEEEEECCCCCCHHHHHHCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCC HRLRLKVNTGVKTDYNIASLPFGYIERKPVVPVNWRETYSEMPIDIEPLEQSVTLTNEAE CEEEEEEECCCCCCCCEECCCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCC SCTIFTQGIKEYQQLDQYLALTLLATTGQLGKPDLAYRPGRASGDTTKKGHVLIETEGAQ CEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCH LLGKHEFSLAIYLGDQAFDEHKTAERTKAFNQANVSYQRQPFNHFLHRLDNKIQKTERKL HCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC GAKQTLGMLNLPKEYLVSACHPSYYSADKYIIRLENPTNTPQKLALSDMSFEYVNAIEEV CHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHH VANDNNTIPAYGAVTLRLEI HCCCCCCCCCCEEEEEEEEC >Mature Secondary Structure MVKAHIVNHTHWDREWYFTSADALVLSEQLFTEVIDELKKHPEANFVLDGQLSILDDYVA CEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHH LYPEKLADIKQLIADKQLFIGPWFTQTDAFFAHGESILRNAMIGIFDSKKYGDYMEIGYL HCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHCCHHHHHHHHHEEECCCCCCCEEEECCC PDTFGFNAQMPTLLEHAGFDNVIFWRGIHLGEHVASPYFKWQGLGEEASIYAINMPQGYG CCCCCCCCCCCHHHHHCCCCCEEEEECCCCHHHHCCCCCEECCCCCCCEEEEEECCCCCC TGMLLEPTSAYVDGRLDPAIDFIEKYSKTTEVLIPSGNDQLNIISNFAEKLVEINKMGRH CCEEECCCHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCC DYQLSTYQDFIQYVRELPDLEEYRGEFRSPVLARVHKTIGSSRMNIKLKSASLEQKLLTR CCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHH IEPLLVIAKASGISISERLLMHTWKKLLEGQAHDSLAGCVSDPVAEDILHRMKEADELCD HCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHH SIENTIVKKIADDLSLAANEIIVFNTDSHDFDGCKEIQVVTEHKNIHFPAFPDATIVQEE HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCEECCCCCCCHHHHHH FIPSRENVLEETPAGNRFIEEPGYYVLQVRVKVELPGLGYRVIAFEENDRELDSMIASND CCCCHHHHHHCCCCCCCEECCCCEEEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHCCC VAITNDFYKITFENGEIALEKPNGERITSFITLEDDVNAGDTYDYSPLAGDIAELFTFSE EEEECCEEEEEEECCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH AKTEKSSEVERLILTGKSDFPLDRLAKEGHGDLQIKLILEVKKGSELLVVNVEVDNQIKS HHCCCHHHHHEEEEECCCCCCHHHHHHCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCC HRLRLKVNTGVKTDYNIASLPFGYIERKPVVPVNWRETYSEMPIDIEPLEQSVTLTNEAE CEEEEEEECCCCCCCCEECCCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCC SCTIFTQGIKEYQQLDQYLALTLLATTGQLGKPDLAYRPGRASGDTTKKGHVLIETEGAQ CEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCH LLGKHEFSLAIYLGDQAFDEHKTAERTKAFNQANVSYQRQPFNHFLHRLDNKIQKTERKL HCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC GAKQTLGMLNLPKEYLVSACHPSYYSADKYIIRLENPTNTPQKLALSDMSFEYVNAIEEV CHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHH VANDNNTIPAYGAVTLRLEI HCCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 9063979 [H]