| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is tenA [H]
Identifier: 226222942
GI number: 226222942
Start: 338532
End: 339206
Strand: Direct
Name: tenA [H]
Synonym: Lm4b_00334
Alternate gene names: 226222942
Gene position: 338532-339206 (Clockwise)
Preceding gene: 226222941
Following gene: 226222943
Centisome position: 11.62
GC content: 46.52
Gene sequence:
>675_bases GTGTTTGTTCACGGTTTTCAAGAAGAAGTAGGGGATTTATGGCAAGAAACGTTGCAGCATCCATTTGTGCAGAGTTTGGC GGATGGGACCCTTGAGAAGGAGGCGTTTTACTATTATTTGCTCCAGGATGATTATTACTTGTCGCATTTTGAGAAGGTGA TTGAGAAAAGTGTTGCGCAAGCTGGAACTGCGGAAATTGCTGCGGAAATGAGGGAAGTACAGGTGCGGCTTCAGCAGTCG GAATTGTTGATGCGCGAACAGTTTTATCCGCGGGTTGGGCTAACGGAGCGCGATTTTTCCGTGCGAAAACCGGCACCAAC TGCTTATCATTATACTTCTCACCTTTACCGGATGGCAGATTTTGGCAGTTTTGGGGTAACGATTGCGGCGCTTTTGCCGT GTTATGCGCTTTATGCTGATATGGGGAAAATGTACGAAGGGGCGCGGAGTTCGGAGCCATTTTATCAAGAGTTGTTGGAT AGTTATGTGGATGAAAATTATCAAAAAGTGGTGTTGCAGCAGAAGCGGTTGGTGGAACAGGCGGCGAGTATGGCGGATGC GCGGGAGCTGGCCCTCATGAAGCAGGCTTTTCAAATTAGTGTGGAAATGGAATGGGCATTTTTTGATATGGCTTATAAAA AACAAAATTGGCGTGGGAGTGTGAATTATGTTTGA
Upstream 100 bases:
>100_bases GAATGTGAAAGTGACCGGAAAATTTATCGCGGCTACTGTTTCTTTGCTTATGCTAAGGGACAGTGGGCGCTTTTTTTATT GTTCAAAAGGAGGAGTTTGA
Downstream 100 bases:
>100_bases TTTTATGACGTTGGAAAAGGTGTGGGAAAAAGGGCCGTTGGTACATAATATTACGAATATCGTGGTCGCGAATGACTCGG CGAACGGGTTGCTTGCGATT
Product: thiamin biosynthesis protein
Products: NA
Alternate protein names: Thiaminase II; Transcriptional activator tenA [H]
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MFVHGFQEEVGDLWQETLQHPFVQSLADGTLEKEAFYYYLLQDDYYLSHFEKVIEKSVAQAGTAEIAAEMREVQVRLQQS ELLMREQFYPRVGLTERDFSVRKPAPTAYHYTSHLYRMADFGSFGVTIAALLPCYALYADMGKMYEGARSSEPFYQELLD SYVDENYQKVVLQQKRLVEQAASMADARELALMKQAFQISVEMEWAFFDMAYKKQNWRGSVNYV
Sequences:
>Translated_224_residues MFVHGFQEEVGDLWQETLQHPFVQSLADGTLEKEAFYYYLLQDDYYLSHFEKVIEKSVAQAGTAEIAAEMREVQVRLQQS ELLMREQFYPRVGLTERDFSVRKPAPTAYHYTSHLYRMADFGSFGVTIAALLPCYALYADMGKMYEGARSSEPFYQELLD SYVDENYQKVVLQQKRLVEQAASMADARELALMKQAFQISVEMEWAFFDMAYKKQNWRGSVNYV >Mature_224_residues MFVHGFQEEVGDLWQETLQHPFVQSLADGTLEKEAFYYYLLQDDYYLSHFEKVIEKSVAQAGTAEIAAEMREVQVRLQQS ELLMREQFYPRVGLTERDFSVRKPAPTAYHYTSHLYRMADFGSFGVTIAALLPCYALYADMGKMYEGARSSEPFYQELLD SYVDENYQKVVLQQKRLVEQAASMADARELALMKQAFQISVEMEWAFFDMAYKKQNWRGSVNYV
Specific function: Stimulates the production of several extracellular degradative enzymes at the transcriptional level, probably by interfering with degS and degU, which are required for this effect. Is not an essential protein, but affects the sporulation frequency [H]
COG id: COG0819
COG function: function code K; Putative transcription activator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiaminase-2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016084 - InterPro: IPR004305 [H]
Pfam domain/function: PF03070 TENA_THI-4 [H]
EC number: =3.5.99.2 [H]
Molecular weight: Translated: 26133; Mature: 26133
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVHGFQEEVGDLWQETLQHPFVQSLADGTLEKEAFYYYLLQDDYYLSHFEKVIEKSVAQ CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCHHHHHHHHHHHHHHHH AGTAEIAAEMREVQVRLQQSELLMREQFYPRVGLTERDFSVRKPAPTAYHYTSHLYRMAD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FGSFGVTIAALLPCYALYADMGKMYEGARSSEPFYQELLDSYVDENYQKVVLQQKRLVEQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH AASMADARELALMKQAFQISVEMEWAFFDMAYKKQNWRGSVNYV HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFVHGFQEEVGDLWQETLQHPFVQSLADGTLEKEAFYYYLLQDDYYLSHFEKVIEKSVAQ CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCHHHHHHHHHHHHHHHH AGTAEIAAEMREVQVRLQQSELLMREQFYPRVGLTERDFSVRKPAPTAYHYTSHLYRMAD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FGSFGVTIAALLPCYALYADMGKMYEGARSSEPFYQELLDSYVDENYQKVVLQQKRLVEQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH AASMADARELALMKQAFQISVEMEWAFFDMAYKKQNWRGSVNYV HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1898926; 9384377 [H]