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The map label for this gene is ydjC [C]

Identifier: 226222941

GI number: 226222941

Start: 337524

End: 338309

Strand: Direct

Name: ydjC [C]

Synonym: Lm4b_00333

Alternate gene names: 226222941

Gene position: 337524-338309 (Clockwise)

Preceding gene: 226222940

Following gene: 226222942

Centisome position: 11.59

GC content: 45.42

Gene sequence:

>786_bases
ATGCCAAAACTAATCATCGACGCAGACGATTTCGGTCTATCCAAAGCCATCAACCACGGCATCATCGAAAGCTACAAAAC
CGGCATCACAACATCCACTTTACTCATGCCGAACCTAGAAACTGCCGAGCACGCAATCACTCTAGCAAAAGACCACACAG
ACCTATTCATCGGGCAACACACAAATTTCTTACTCGGAAAACCATGCGCGGACCCGGCGGAAATCCCGTCACTTGTCGAC
GAAAACGGGGAATTCCATCGTTCCAAATATTACCGTGCTAACCCAGAACTGAAATTCCAATACGAAGATGTGCGCACGGA
AACTATCGCTCAAATGGAACGGTTCAAAGCGCTAACGGGTCACTACCCAGAACACATTGACTGCCACTCAATCGGTGATG
AAACGGTTGACCAAGCTTTCTTTGATATTGCGCGTGAGTTCGGGATTCACACCACTTTAAAATACAGCGGTGATAAGAAA
TGGCCAGATCAGGAAGGTTATTTACCAATTACTAAACTGTTGGAGTCTGGCGCACTCCCATACACAAATGGTGGTGTCTC
AGTTGAAAATTTCCTTAACGATGATTTCGGATTATTAAAATTGGCGCCAAACGAAATCGCTGAGATGCATTTTGATGTCG
GTTTTTTGGATCAATTTGTGCTGGATAATTCTTCTTATACGTTGATGCGGTGCCGCGAGCTTGCGACGATTTGTGATGTG
CGGGTGCGGGATTGGCTTCTTGAAAATGGGTTTGAGCTTATTACATTTGGGGATTTACAGCGGTAA

Upstream 100 bases:

>100_bases
CGGATGTTTGTGCGTTTGAGGTTTCGGTTGGGGATGCGTTTGCGGAAATACCGGTGGAGATTTTGGATGTTGTGTTTAAA
CAATTAGAGGTGGATTTACC

Downstream 100 bases:

>100_bases
AACTCTATGTTATGATGAACGCAACTTAATAAGAAAAACTAGGGGGGCCGATTCTGGCTGAGATAGGAAGGTAATGCTTT
CTGACCCTTTGAACCTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MPKLIIDADDFGLSKAINHGIIESYKTGITTSTLLMPNLETAEHAITLAKDHTDLFIGQHTNFLLGKPCADPAEIPSLVD
ENGEFHRSKYYRANPELKFQYEDVRTETIAQMERFKALTGHYPEHIDCHSIGDETVDQAFFDIAREFGIHTTLKYSGDKK
WPDQEGYLPITKLLESGALPYTNGGVSVENFLNDDFGLLKLAPNEIAEMHFDVGFLDQFVLDNSSYTLMRCRELATICDV
RVRDWLLENGFELITFGDLQR

Sequences:

>Translated_261_residues
MPKLIIDADDFGLSKAINHGIIESYKTGITTSTLLMPNLETAEHAITLAKDHTDLFIGQHTNFLLGKPCADPAEIPSLVD
ENGEFHRSKYYRANPELKFQYEDVRTETIAQMERFKALTGHYPEHIDCHSIGDETVDQAFFDIAREFGIHTTLKYSGDKK
WPDQEGYLPITKLLESGALPYTNGGVSVENFLNDDFGLLKLAPNEIAEMHFDVGFLDQFVLDNSSYTLMRCRELATICDV
RVRDWLLENGFELITFGDLQR
>Mature_260_residues
PKLIIDADDFGLSKAINHGIIESYKTGITTSTLLMPNLETAEHAITLAKDHTDLFIGQHTNFLLGKPCADPAEIPSLVDE
NGEFHRSKYYRANPELKFQYEDVRTETIAQMERFKALTGHYPEHIDCHSIGDETVDQAFFDIAREFGIHTTLKYSGDKKW
PDQEGYLPITKLLESGALPYTNGGVSVENFLNDDFGLLKLAPNEIAEMHFDVGFLDQFVLDNSSYTLMRCRELATICDVR
VRDWLLENGFELITFGDLQR

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Escherichia coli, GI1788028, Length=259, Percent_Identity=27.7992277992278, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 29600; Mature: 29468

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLIIDADDFGLSKAINHGIIESYKTGITTSTLLMPNLETAEHAITLAKDHTDLFIGQH
CCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHEEEEECCCCEEEEECC
TNFLLGKPCADPAEIPSLVDENGEFHRSKYYRANPELKFQYEDVRTETIAQMERFKALTG
CCEEEECCCCCHHHHHHHHCCCCCCHHCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHC
HYPEHIDCHSIGDETVDQAFFDIAREFGIHTTLKYSGDKKWPDQEGYLPITKLLESGALP
CCCCCCCHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCC
YTNGGVSVENFLNDDFGLLKLAPNEIAEMHFDVGFLDQFVLDNSSYTLMRCRELATICDV
CCCCCEEHHHHCCCCCCEEEECHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RVRDWLLENGFELITFGDLQR
HHHHHHHHCCCEEEEECCCCC
>Mature Secondary Structure 
PKLIIDADDFGLSKAINHGIIESYKTGITTSTLLMPNLETAEHAITLAKDHTDLFIGQH
CCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHEEEEECCCCEEEEECC
TNFLLGKPCADPAEIPSLVDENGEFHRSKYYRANPELKFQYEDVRTETIAQMERFKALTG
CCEEEECCCCCHHHHHHHHCCCCCCHHCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHC
HYPEHIDCHSIGDETVDQAFFDIAREFGIHTTLKYSGDKKWPDQEGYLPITKLLESGALP
CCCCCCCHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCC
YTNGGVSVENFLNDDFGLLKLAPNEIAEMHFDVGFLDQFVLDNSSYTLMRCRELATICDV
CCCCCEEHHHHCCCCCCEEEECHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RVRDWLLENGFELITFGDLQR
HHHHHHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]