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The map label for this gene is yycH [H]

Identifier: 226222925

GI number: 226222925

Start: 321403

End: 322731

Strand: Direct

Name: yycH [H]

Synonym: Lm4b_00317

Alternate gene names: 226222925

Gene position: 321403-322731 (Clockwise)

Preceding gene: 226222924

Following gene: 226222926

Centisome position: 11.03

GC content: 35.52

Gene sequence:

>1329_bases
TTGGGAATGATGAAAAAAACAGGATTTCGCTCATTTATACTAACCATTTTAGTCGTACTCAGTATTGTCCTAAGCTACTT
TATTTGGAAGGGACAACCTGATTACGAAGCAATTAACGTAAAAGAAGTGGAAAAAACAACCATTGACAAGACAATGACAA
CATCGCAAGTATTCAAACCATACAAGCTGGCTGTAAATGCAAATGAAAATAATTACCAAAGTTTAGATGCTGATTTATTA
AACGAACTAATGGCACAAGGTAAAGCCTTTAGTTTCTCGGAAGTAGTATTAGCTAGTAAAAAAAGTAGTGAAGACTATGA
GAAATTAATCCATAAAAACGGAACTATCGAGATTATTTTCCCCAATAATATTCCGTTCTCTATCTTTGCTCAAATTTTTC
AAGTAGAAGGGGAAGGGCTTGAGTCAGCGTTCTTTAATCGAATTGTTTTTGATATTAACAAAACGGATACTGGGCTACAT
TCGGTTTATTTCACAAATGACGATCAAGAAAATATTTACCAAAGTTCTTTGCAAAATAAAGACATTGATAAAATCGAAAA
AATTGTTAAAAAGAACGAAAGCAAGCTGACTCAAAATGATAAGCTAATTTCAAACAAACGCAATCTTTTTCTAAGCTCTG
AAAAAACGAAACTAAATCGCAAAAAATATATCATCGATTCGCTTGAAATTAATTTATTCACGTCCGCACTATTCCAAGAT
TCTGGTACTGTTAAAAGTGAAGGAAACACATACACAGATGGTTCAAGTGTCATTGAAATGGATACAGATAATAAAGTATT
AGAGTATGTAAATCCATCACAAGAACGTACTAATCCAGAAGATCTCAGTAGTGTCAAACGAGCTGGACTTATTCAAGATA
GTTTTAACTTTGTGAACGACCATGCTGGCTGGACTGGCGACGGCGCTTACTATTTCACAGGTTATGCCGCGGAAAGTGCG
ACGACTAATTTCAGTTTATTCATTGATAATTTACAAGTATACAATGAGAATGGCATGGCGGATATTTCTGTAACAGAAGG
ACTTGAAGCTGTTTATAAATACATGAGACCATTTTTCCGCTTAGATACAGATGTTCCCGGAGAGAAAAAAGAAGTTACGT
TACCATCCTCTTATTCTGTCTATAGTGCTCTTGCCCAAAATCCTAACGTCAAAGCAGAAGAAATTGAAGATATTGTTCCT
GGCTATCATATGACTAGAAGCGAATCTTCGGGCATGAATCGTCTTGTAACATTAGAGCCGACGTGGTTGTATAAGTATCA
TGACAAATGGTTCATCTTCCAACCAGACGCAGAAAAGGCGGGTGAATAA

Upstream 100 bases:

>100_bases
TTATCGAAGCACATGGTGGTCGAATTTGGGCCGAACGTAATAAAACCAAAGGAACCATAATTAAATTTACCCTGCCATAC
AGTGACTTACCGGAGGATGA

Downstream 100 bases:

>100_bases
AAATGGATTGGCGTAAAACACAAATGATTTTTATTGTGACTCTCCTCATTCTTAATGTTTTTTTAGCGGTAATATTTTTC
AACAAGCAGTTATCAGATGA

Product: YycH protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MGMMKKTGFRSFILTILVVLSIVLSYFIWKGQPDYEAINVKEVEKTTIDKTMTTSQVFKPYKLAVNANENNYQSLDADLL
NELMAQGKAFSFSEVVLASKKSSEDYEKLIHKNGTIEIIFPNNIPFSIFAQIFQVEGEGLESAFFNRIVFDINKTDTGLH
SVYFTNDDQENIYQSSLQNKDIDKIEKIVKKNESKLTQNDKLISNKRNLFLSSEKTKLNRKKYIIDSLEINLFTSALFQD
SGTVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTNPEDLSSVKRAGLIQDSFNFVNDHAGWTGDGAYYFTGYAAESA
TTNFSLFIDNLQVYNENGMADISVTEGLEAVYKYMRPFFRLDTDVPGEKKEVTLPSSYSVYSALAQNPNVKAEEIEDIVP
GYHMTRSESSGMNRLVTLEPTWLYKYHDKWFIFQPDAEKAGE

Sequences:

>Translated_442_residues
MGMMKKTGFRSFILTILVVLSIVLSYFIWKGQPDYEAINVKEVEKTTIDKTMTTSQVFKPYKLAVNANENNYQSLDADLL
NELMAQGKAFSFSEVVLASKKSSEDYEKLIHKNGTIEIIFPNNIPFSIFAQIFQVEGEGLESAFFNRIVFDINKTDTGLH
SVYFTNDDQENIYQSSLQNKDIDKIEKIVKKNESKLTQNDKLISNKRNLFLSSEKTKLNRKKYIIDSLEINLFTSALFQD
SGTVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTNPEDLSSVKRAGLIQDSFNFVNDHAGWTGDGAYYFTGYAAESA
TTNFSLFIDNLQVYNENGMADISVTEGLEAVYKYMRPFFRLDTDVPGEKKEVTLPSSYSVYSALAQNPNVKAEEIEDIVP
GYHMTRSESSGMNRLVTLEPTWLYKYHDKWFIFQPDAEKAGE
>Mature_441_residues
GMMKKTGFRSFILTILVVLSIVLSYFIWKGQPDYEAINVKEVEKTTIDKTMTTSQVFKPYKLAVNANENNYQSLDADLLN
ELMAQGKAFSFSEVVLASKKSSEDYEKLIHKNGTIEIIFPNNIPFSIFAQIFQVEGEGLESAFFNRIVFDINKTDTGLHS
VYFTNDDQENIYQSSLQNKDIDKIEKIVKKNESKLTQNDKLISNKRNLFLSSEKTKLNRKKYIIDSLEINLFTSALFQDS
GTVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTNPEDLSSVKRAGLIQDSFNFVNDHAGWTGDGAYYFTGYAAESAT
TNFSLFIDNLQVYNENGMADISVTEGLEAVYKYMRPFFRLDTDVPGEKKEVTLPSSYSVYSALAQNPNVKAEEIEDIVPG
YHMTRSESSGMNRLVTLEPTWLYKYHDKWFIFQPDAEKAGE

Specific function: Together with yycI, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4863

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009996 [H]

Pfam domain/function: PF07435 YycH [H]

EC number: NA

Molecular weight: Translated: 50246; Mature: 50115

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMMKKTGFRSFILTILVVLSIVLSYFIWKGQPDYEAINVKEVEKTTIDKTMTTSQVFKP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCC
YKLAVNANENNYQSLDADLLNELMAQGKAFSFSEVVLASKKSSEDYEKLIHKNGTIEIIF
EEEEEECCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCEEEEE
PNNIPFSIFAQIFQVEGEGLESAFFNRIVFDINKTDTGLHSVYFTNDDQENIYQSSLQNK
CCCCCHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCEEEEEEECCCHHHHHHHHHCCC
DIDKIEKIVKKNESKLTQNDKLISNKRNLFLSSEKTKLNRKKYIIDSLEINLFTSALFQD
CHHHHHHHHHCCHHHHCCCCHHHCCCCCEEEECCHHHHCCHHEEEEHEEHHHHHHHHHCC
SGTVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTNPEDLSSVKRAGLIQDSFNFVND
CCCEECCCCEECCCCEEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC
HAGWTGDGAYYFTGYAAESATTNFSLFIDNLQVYNENGMADISVTEGLEAVYKYMRPFFR
CCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHC
LDTDVPGEKKEVTLPSSYSVYSALAQNPNVKAEEIEDIVPGYHMTRSESSGMNRLVTLEP
CCCCCCCCCCEEECCCCHHHHHHHHCCCCCCHHHHHHHCCCCEECCCCCCCCCEEEEECC
TWLYKYHDKWFIFQPDAEKAGE
EEEEEECCEEEEECCCHHHCCC
>Mature Secondary Structure 
GMMKKTGFRSFILTILVVLSIVLSYFIWKGQPDYEAINVKEVEKTTIDKTMTTSQVFKP
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCC
YKLAVNANENNYQSLDADLLNELMAQGKAFSFSEVVLASKKSSEDYEKLIHKNGTIEIIF
EEEEEECCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCEEEEE
PNNIPFSIFAQIFQVEGEGLESAFFNRIVFDINKTDTGLHSVYFTNDDQENIYQSSLQNK
CCCCCHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCEEEEEEECCCHHHHHHHHHCCC
DIDKIEKIVKKNESKLTQNDKLISNKRNLFLSSEKTKLNRKKYIIDSLEINLFTSALFQD
CHHHHHHHHHCCHHHHCCCCHHHCCCCCEEEECCHHHHCCHHEEEEHEEHHHHHHHHHCC
SGTVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTNPEDLSSVKRAGLIQDSFNFVND
CCCEECCCCEECCCCEEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC
HAGWTGDGAYYFTGYAAESATTNFSLFIDNLQVYNENGMADISVTEGLEAVYKYMRPFFR
CCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHC
LDTDVPGEKKEVTLPSSYSVYSALAQNPNVKAEEIEDIVPGYHMTRSESSGMNRLVTLEP
CCCCCCCCCCEEECCCCHHHHHHHHCCCCCCHHHHHHHCCCCEECCCCCCCCCEEEEECC
TWLYKYHDKWFIFQPDAEKAGE
EEEEEECCEEEEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]