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The map label for this gene is yycI [H]

Identifier: 226222926

GI number: 226222926

Start: 322734

End: 323573

Strand: Direct

Name: yycI [H]

Synonym: Lm4b_00318

Alternate gene names: 226222926

Gene position: 322734-323573 (Clockwise)

Preceding gene: 226222925

Following gene: 226222927

Centisome position: 11.08

GC content: 36.9

Gene sequence:

>840_bases
ATGGATTGGCGTAAAACACAAATGATTTTTATTGTGACTCTCCTCATTCTTAATGTTTTTTTAGCGGTAATATTTTTCAA
CAAGCAGTTATCAGATGACCCAGATACACTCGGAAATGAAACGCTAGAAGAACGATTAAAAGCAGATAATATCTCTCATC
CTGATTTATCGACCAAACCTACTAGCGGCTCTATTTTCACTACAGAGCGAGCAGCTTTTACAACAAAAGATGTGAGCGAT
CTTACAGGGCAAGCCATTACGCTTAAAGATAACAATAAACAAATCTATTCTGTCTTACAAACTCCCGTAAAAGCTGGCAA
AAAAGGTAGTAACCCAGAATTTCAAAAATTTATGGAATCAGATGTTTATCGCGGGGAATCCTATCAATTTTGGAATTATG
ACAAAGATGCTCGGACCCTCACTTTTAATCAATTAATTAATAATAATATGGTTTTATTTGATGAAGCGGGCCAAATTACT
TTTTATTTAGATCAAGATGACCGAGTGATCTCATACGAGCAAACTTGGATGTCTAAGCAAGATGATTTAAAAGATAAAAC
CAATTTAATGTCCGCAACAGATGCATTAGAAGCGGTTTATCAGCACGGAGAATTGAAGCAAGACAGCGACGTGGTTTCTG
CAACATTTGGCTATTACACGACAGTACAGCTACCCTCTGGAAATGTATACTTCCCCGTTTGGTGTTTTGAAGTAAAACAT
TCTGGTGAAACTAATTATGTCCTCGTAAATGCCAAAGACGAACAAGTAATTAATCAATCAGACAACAAATCAGCCACCGA
GCCAGGTACAGAATTATCGAGCCGTCAGAAAACCAAATAA

Upstream 100 bases:

>100_bases
GCATGAATCGTCTTGTAACATTAGAGCCGACGTGGTTGTATAAGTATCATGACAAATGGTTCATCTTCCAACCAGACGCA
GAAAAGGCGGGTGAATAAAA

Downstream 100 bases:

>100_bases
AAAATGAGTCAACCTAATTATCATGAAAAATTAGGTTGGCTTTTTCAAACGATAGGGCATGCAATTTTGCCGAATTAGCG
TTACAATGAAAGATATATAA

Product: YycI protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEERLKADNISHPDLSTKPTSGSIFTTERAAFTTKDVSD
LTGQAITLKDNNKQIYSVLQTPVKAGKKGSNPEFQKFMESDVYRGESYQFWNYDKDARTLTFNQLINNNMVLFDEAGQIT
FYLDQDDRVISYEQTWMSKQDDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGYYTTVQLPSGNVYFPVWCFEVKH
SGETNYVLVNAKDEQVINQSDNKSATEPGTELSSRQKTK

Sequences:

>Translated_279_residues
MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEERLKADNISHPDLSTKPTSGSIFTTERAAFTTKDVSD
LTGQAITLKDNNKQIYSVLQTPVKAGKKGSNPEFQKFMESDVYRGESYQFWNYDKDARTLTFNQLINNNMVLFDEAGQIT
FYLDQDDRVISYEQTWMSKQDDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGYYTTVQLPSGNVYFPVWCFEVKH
SGETNYVLVNAKDEQVINQSDNKSATEPGTELSSRQKTK
>Mature_279_residues
MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEERLKADNISHPDLSTKPTSGSIFTTERAAFTTKDVSD
LTGQAITLKDNNKQIYSVLQTPVKAGKKGSNPEFQKFMESDVYRGESYQFWNYDKDARTLTFNQLINNNMVLFDEAGQIT
FYLDQDDRVISYEQTWMSKQDDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGYYTTVQLPSGNVYFPVWCFEVKH
SGETNYVLVNAKDEQVINQSDNKSATEPGTELSSRQKTK

Specific function: Together with yycH, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4853

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018604 [H]

Pfam domain/function: PF09648 YycI [H]

EC number: NA

Molecular weight: Translated: 31799; Mature: 31799

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEERLKADNISHPDLSTKP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHCCCCCCCCCCCC
TSGSIFTTERAAFTTKDVSDLTGQAITLKDNNKQIYSVLQTPVKAGKKGSNPEFQKFMES
CCCCEEEECCCEEECCCHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
DVYRGESYQFWNYDKDARTLTFNQLINNNMVLFDEAGQITFYLDQDDRVISYEQTWMSKQ
HHCCCCCEEECCCCCCCCEEEHHHHHCCCEEEEECCCCEEEEECCCCCEEEHHHHHCCCC
DDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGYYTTVQLPSGNVYFPVWCFEVKH
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCCEEEEEEEEEEEE
SGETNYVLVNAKDEQVINQSDNKSATEPGTELSSRQKTK
CCCCCEEEEECCCHHHHCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEERLKADNISHPDLSTKP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHCCCCCCCCCCCC
TSGSIFTTERAAFTTKDVSDLTGQAITLKDNNKQIYSVLQTPVKAGKKGSNPEFQKFMES
CCCCEEEECCCEEECCCHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
DVYRGESYQFWNYDKDARTLTFNQLINNNMVLFDEAGQITFYLDQDDRVISYEQTWMSKQ
HHCCCCCEEECCCCCCCCEEEHHHHHCCCEEEEECCCCEEEEECCCCCEEEHHHHHCCCC
DDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGYYTTVQLPSGNVYFPVWCFEVKH
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCCEEEEEEEEEEEE
SGETNYVLVNAKDEQVINQSDNKSATEPGTELSSRQKTK
CCCCCEEEEECCCHHHHCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]