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The map label for this gene is fucU [H]

Identifier: 225861983

GI number: 225861983

Start: 2032075

End: 2032515

Strand: Reverse

Name: fucU [H]

Synonym: SPT_2178

Alternate gene names: 225861983

Gene position: 2032515-2032075 (Counterclockwise)

Preceding gene: 225861984

Following gene: 225861982

Centisome position: 96.23

GC content: 32.65

Gene sequence:

>441_bases
ATGTTAAAACATATACCGAAAAATATTTCTCCAGATTTATTGAAGACTTTAATGGAAATGGGACATGGAGATGAAATAGT
ATTAGCTGACGCGAATTATCCTTCTGCCTCATGTGCAAATAAGCTAATTCGTTGTGATGGTGTAAATATTCCAGAATTAT
TAGATTCCATTCTGTATTTAATGCCATTAGATAGTTACGTCGATAGTTCAATTCAGTTTATGAACGTTGTTTCGGGTGAT
GATATTCCTAAGATATGGGGTACCTATAGACAGATGATTGAAGGTCATGGTACAGATCTTAAAACGATTACTTATCTTAG
AAGAGAAGACTTTTATGAACGTAGTAAGAAAGCTTATGCTATTGTTGCTACAGGAGAAACTTCACTTTATGCTAATATTA
TCCTTAAGAAAGGAGTAGTTGTTGAAAGAGAAAATGTTTAA

Upstream 100 bases:

>100_bases
CTAAGAATTTTGGAGAGCCAGTAGTTCTTCCTGATGAGGAGATGGATTTAATGGCAGAAAAATTTAAAACATACGGTCAG
AGAAAATAGGGAGGATATTA

Downstream 100 bases:

>100_bases
TAGAGGAATTTTAGTTGCCAGTCATGGTAATTTTGCTAGCGGAGCTCTCATGACCGCAGAAATGTTTGTTGGTGAGACAA
CAAATGATAGAGTTAGGACA

Product: fucose operon FucU protein

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLKHIPKNISPDLLKTLMEMGHGDEIVLADANYPSASCANKLIRCDGVNIPELLDSILYLMPLDSYVDSSIQFMNVVSGD
DIPKIWGTYRQMIEGHGTDLKTITYLRREDFYERSKKAYAIVATGETSLYANIILKKGVVVERENV

Sequences:

>Translated_146_residues
MLKHIPKNISPDLLKTLMEMGHGDEIVLADANYPSASCANKLIRCDGVNIPELLDSILYLMPLDSYVDSSIQFMNVVSGD
DIPKIWGTYRQMIEGHGTDLKTITYLRREDFYERSKKAYAIVATGETSLYANIILKKGVVVERENV
>Mature_146_residues
MLKHIPKNISPDLLKTLMEMGHGDEIVLADANYPSASCANKLIRCDGVNIPELLDSILYLMPLDSYVDSSIQFMNVVSGD
DIPKIWGTYRQMIEGHGTDLKTITYLRREDFYERSKKAYAIVATGETSLYANIILKKGVVVERENV

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=146, Percent_Identity=46.5753424657534, Blast_Score=138, Evalue=2e-33,
Organism=Homo sapiens, GI148596951, Length=131, Percent_Identity=44.2748091603053, Blast_Score=116, Evalue=7e-27,
Organism=Escherichia coli, GI1789169, Length=140, Percent_Identity=45.7142857142857, Blast_Score=115, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 16427; Mature: 16427

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKHIPKNISPDLLKTLMEMGHGDEIVLADANYPSASCANKLIRCDGVNIPELLDSILYL
CCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
MPLDSYVDSSIQFMNVVSGDDIPKIWGTYRQMIEGHGTDLKTITYLRREDFYERSKKAYA
HCCHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEE
IVATGETSLYANIILKKGVVVERENV
EEEECCCHHHHHHHHHCCEEEECCCC
>Mature Secondary Structure
MLKHIPKNISPDLLKTLMEMGHGDEIVLADANYPSASCANKLIRCDGVNIPELLDSILYL
CCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
MPLDSYVDSSIQFMNVVSGDDIPKIWGTYRQMIEGHGTDLKTITYLRREDFYERSKKAYA
HCCHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEE
IVATGETSLYANIILKKGVVVERENV
EEEECCCHHHHHHHHHCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA