Click here to switch to the map view.

The map label for this gene is 225861882

Identifier: 225861882

GI number: 225861882

Start: 1916075

End: 1917217

Strand: Reverse

Name: 225861882

Synonym: SPT_2058

Alternate gene names: NA

Gene position: 1917217-1916075 (Counterclockwise)

Preceding gene: 225861883

Following gene: 225861881

Centisome position: 90.77

GC content: 42.87

Gene sequence:

>1143_bases
ATGAAGAAAAGAATGTTATTAGCGTCAACAGTAGCCTTGTCATTTGCCCCAGTATTGGCAACTCAAGCAGAAGAAGTTCT
TTGGACTGCACGTAGTGTTGAGCAAATCCAAAACGATTTGACTAAAACGGACAACAAAACAAGTTATACCGTACAGTATG
GTGATACCTTGAGCACTATTGCAGAAGCCTTGGGTGTAGATGTCACAGTGCTTGCGAATCTGAACAAAATCACTAATATG
GACTTGATTTTCCCAGAAACTGTTTTGACAACGACTGTCAATGAAGCAGAAGAAGTAACAGAAGTTGAAATCCAAACACC
TCAAGCAGACTCTAGTGAAGAAGTGACAACTGCGACAGCAGATTTGACCACTAATCAAGTGATCGTTGATGATCAAACTG
TTCAGGTTGCAGACCTTTCTCAACCAATTGCAGAAGCTCCAAAAGAAGTAGCATCAAGTTCAGAAGTTACAAAGACAGTG
ATTGCTTCTGAAGAAGTGGCACCATCTACGGGCACTTCTGTCCCAGAGGAGCAAACGGCCGAAACAAGCAGTGCAGTTGC
AGAAGAAGCTCCTCAGGAAACGACTCCAGCTGAGAAGCAGGAAACACAAGCAAGCCCTCAAGCTGCATCAGCAGTGGAAG
TAACTACAACAAGTTCAGAAGCAAAAGAAGTAGCATCATCAAATGGAGCTACAGCAGCAGTTTCTACTTATCAACCAGAA
GAGACGAAAATAATTTCAACAACTTACGAGGCTCCAGCTGCGCCCGATTATGCTGGACTTGCAGTAGCAAAATCTGAAAA
TGCAGGTCTTCAACCACAAACAGCTGCCTTTAAAGAAGAAATTGCTAACTTGTTTGGCATTACATCCTTTAGTGGTTATC
GTCCAGGAGACAGTGGAGATCACGGAAAAGGTTTGGCTATCGACTTTATGGTACCAGAACGTTCAGAATTAGGGGATAAG
ATTGCGGAATATGCTATTCAAAATATGGCCAGCCGTGGCATTAGTTACATCATCTGGAAACAACGTTTCTATGCTCCATT
CGATAGCAAATATGGGCCAGCTAACACTTGGAACCCAATGCCAGACCGTGGTAGTGTGACAGAAAATCACTATGATCACG
TTCACGTTTCAATGAATGGATAA

Upstream 100 bases:

>100_bases
CAAGGAATAGACAGTTCTGTTAAATAGGCCCGAGAGGGCTTTTTTTCTACATTTTTTGTGTTATGATAGACAGGTACTCA
TTTGAAAGGAATTTGAAAGA

Downstream 100 bases:

>100_bases
ACCCGACTTGATAACATCATTTTGACGAATGAGATCTAGCTTTCGTGATGGCAAGCGATTCTCGTTCGTTTTTTCTTTGT
CATACTCTTCGAAAATCTCT

Product: LysM domain-containing protein

Products: NA

Alternate protein names: Peptidase; Surface Antigen; Group B Streptococcal Surface Immunogenic Protein; Surface Immunogenic Protein Truncated; Cell Wall Metabolism LysM Type Protein; LysM Repeat-Containing Protein; SH3 Type 3 Domain-Containing Protein; Surface Immunogenic Protein

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MKKRMLLASTVALSFAPVLATQAEEVLWTARSVEQIQNDLTKTDNKTSYTVQYGDTLSTIAEALGVDVTVLANLNKITNM
DLIFPETVLTTTVNEAEEVTEVEIQTPQADSSEEVTTATADLTTNQVIVDDQTVQVADLSQPIAEAPKEVASSSEVTKTV
IASEEVAPSTGTSVPEEQTAETSSAVAEEAPQETTPAEKQETQASPQAASAVEVTTTSSEAKEVASSNGATAAVSTYQPE
ETKIISTTYEAPAAPDYAGLAVAKSENAGLQPQTAAFKEEIANLFGITSFSGYRPGDSGDHGKGLAIDFMVPERSELGDK
IAEYAIQNMASRGISYIIWKQRFYAPFDSKYGPANTWNPMPDRGSVTENHYDHVHVSMNG

Sequences:

>Translated_380_residues
MKKRMLLASTVALSFAPVLATQAEEVLWTARSVEQIQNDLTKTDNKTSYTVQYGDTLSTIAEALGVDVTVLANLNKITNM
DLIFPETVLTTTVNEAEEVTEVEIQTPQADSSEEVTTATADLTTNQVIVDDQTVQVADLSQPIAEAPKEVASSSEVTKTV
IASEEVAPSTGTSVPEEQTAETSSAVAEEAPQETTPAEKQETQASPQAASAVEVTTTSSEAKEVASSNGATAAVSTYQPE
ETKIISTTYEAPAAPDYAGLAVAKSENAGLQPQTAAFKEEIANLFGITSFSGYRPGDSGDHGKGLAIDFMVPERSELGDK
IAEYAIQNMASRGISYIIWKQRFYAPFDSKYGPANTWNPMPDRGSVTENHYDHVHVSMNG
>Mature_380_residues
MKKRMLLASTVALSFAPVLATQAEEVLWTARSVEQIQNDLTKTDNKTSYTVQYGDTLSTIAEALGVDVTVLANLNKITNM
DLIFPETVLTTTVNEAEEVTEVEIQTPQADSSEEVTTATADLTTNQVIVDDQTVQVADLSQPIAEAPKEVASSSEVTKTV
IASEEVAPSTGTSVPEEQTAETSSAVAEEAPQETTPAEKQETQASPQAASAVEVTTTSSEAKEVASSNGATAAVSTYQPE
ETKIISTTYEAPAAPDYAGLAVAKSENAGLQPQTAAFKEEIANLFGITSFSGYRPGDSGDHGKGLAIDFMVPERSELGDK
IAEYAIQNMASRGISYIIWKQRFYAPFDSKYGPANTWNPMPDRGSVTENHYDHVHVSMNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40576; Mature: 40576

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRMLLASTVALSFAPVLATQAEEVLWTARSVEQIQNDLTKTDNKTSYTVQYGDTLSTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHH
AEALGVDVTVLANLNKITNMDLIFPETVLTTTVNEAEEVTEVEIQTPQADSSEEVTTATA
HHHHCCCEEEEECCHHHCCCEEECCCHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEE
DLTTNQVIVDDQTVQVADLSQPIAEAPKEVASSSEVTKTVIASEEVAPSTGTSVPEEQTA
CCCCCEEEECCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
ETSSAVAEEAPQETTPAEKQETQASPQAASAVEVTTTSSEAKEVASSNGATAAVSTYQPE
HHHHHHHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEEECCCC
ETKIISTTYEAPAAPDYAGLAVAKSENAGLQPQTAAFKEEIANLFGITSFSGYRPGDSGD
CCEEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
HGKGLAIDFMVPERSELGDKIAEYAIQNMASRGISYIIWKQRFYAPFDSKYGPANTWNPM
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCCCC
PDRGSVTENHYDHVHVSMNG
CCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKKRMLLASTVALSFAPVLATQAEEVLWTARSVEQIQNDLTKTDNKTSYTVQYGDTLSTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHH
AEALGVDVTVLANLNKITNMDLIFPETVLTTTVNEAEEVTEVEIQTPQADSSEEVTTATA
HHHHCCCEEEEECCHHHCCCEEECCCHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEE
DLTTNQVIVDDQTVQVADLSQPIAEAPKEVASSSEVTKTVIASEEVAPSTGTSVPEEQTA
CCCCCEEEECCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
ETSSAVAEEAPQETTPAEKQETQASPQAASAVEVTTTSSEAKEVASSNGATAAVSTYQPE
HHHHHHHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEEECCCC
ETKIISTTYEAPAAPDYAGLAVAKSENAGLQPQTAAFKEEIANLFGITSFSGYRPGDSGD
CCEEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
HGKGLAIDFMVPERSELGDKIAEYAIQNMASRGISYIIWKQRFYAPFDSKYGPANTWNPM
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCCCC
PDRGSVTENHYDHVHVSMNG
CCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA