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The map label for this gene is gatC

Identifier: 225858289

GI number: 225858289

Start: 454785

End: 455087

Strand: Reverse

Name: gatC

Synonym: SP70585_0507

Alternate gene names: 225858289

Gene position: 455087-454785 (Counterclockwise)

Preceding gene: 225858302

Following gene: 225858288

Centisome position: 20.83

GC content: 45.54

Gene sequence:

>303_bases
ATGAAAATTACGCAAGAAGAGGTAACACACGTTGCCAATCTTTCAAAATTAAGATTCTCTGAAGAAGAAACTGCTGCCTT
TGCGACCACCTTGTCTAAGATTGTTGACATGGTTGAATTGCTGGGCGAAGTTGACACAACTGGTGTCGCACCTACTACGA
CTATGGCTGACCGCAAGACTGTACTCCGCCCTGATGTGGCCGAAGAAGGAACAGACCGTGATCGCTTGTTTAAAAACGTA
CCTGAACAAGACAACTACTATATCAAGGTGCCAGCTATCCTAGACGATGGAGGAGATGCCTAA

Upstream 100 bases:

>100_bases
TTTCAATTTCTATTTCTTTTCACTTCCCCCTCCCTTATTTATAGGAAAATATGGTAAAATAGAACAGACTAAAAATCATC
ATTTCACGAAAGGATGCAAG

Downstream 100 bases:

>100_bases
TGACTTTTAACAATAAAACTATTGAAGAGTTGCACAATCTCCTTGTCTCTAAGGAAATTTCTGCAACAGAATTGACCCAA
GCAACACTTGAAAATATCAA

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MKITQEEVTHVANLSKLRFSEEETAAFATTLSKIVDMVELLGEVDTTGVAPTTTMADRKTVLRPDVAEEGTDRDRLFKNV
PEQDNYYIKVPAILDDGGDA

Sequences:

>Translated_100_residues
MKITQEEVTHVANLSKLRFSEEETAAFATTLSKIVDMVELLGEVDTTGVAPTTTMADRKTVLRPDVAEEGTDRDRLFKNV
PEQDNYYIKVPAILDDGGDA
>Mature_100_residues
MKITQEEVTHVANLSKLRFSEEETAAFATTLSKIVDMVELLGEVDTTGVAPTTTMADRKTVLRPDVAEEGTDRDRLFKNV
PEQDNYYIKVPAILDDGGDA

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_STRP2 (Q04M40)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_815908.1
- ProteinModelPortal:   Q04M40
- SMR:   Q04M40
- STRING:   Q04M40
- EnsemblBacteria:   EBSTRT00000019877
- GeneID:   4441536
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_0398
- eggNOG:   COG0721
- GeneTree:   EBGT00050000027919
- HOGENOM:   HBG586403
- OMA:   KDVAYIA
- ProtClustDB:   PRK00034
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11044; Mature: 11044

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITQEEVTHVANLSKLRFSEEETAAFATTLSKIVDMVELLGEVDTTGVAPTTTMADRKT
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
VLRPDVAEEGTDRDRLFKNVPEQDNYYIKVPAILDDGGDA
CCCCCCCCCCCCHHHHHHCCCCCCCEEEEECEEECCCCCC
>Mature Secondary Structure
MKITQEEVTHVANLSKLRFSEEETAAFATTLSKIVDMVELLGEVDTTGVAPTTTMADRKT
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
VLRPDVAEEGTDRDRLFKNVPEQDNYYIKVPAILDDGGDA
CCCCCCCCCCCCHHHHHHCCCCCCCEEEEECEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA