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The map label for this gene is ychK [C]

Identifier: 225686062

GI number: 225686062

Start: 194366

End: 195247

Strand: Direct

Name: ychK [C]

Synonym: BMEA_B0209

Alternate gene names: 225686062

Gene position: 194366-195247 (Clockwise)

Preceding gene: 225686061

Following gene: 225686064

Centisome position: 16.4

GC content: 57.37

Gene sequence:

>882_bases
GTGGATAAGGCCCTGTCGTCATCGCCCCGTTTCGCCGTTGCCTTTGGCGGCGGCGGCGCGCGTGGCATTGCCCATATTCA
TGTCGTCGATGTGCTGAACGAATTGGGCATCCAGCCCGTTGCCATTGCCGGATCGTCCATCGGTTCCATTATCGGTTCGA
GCATGGCGAATGGCATGTCCGGCAAGGACATATATGACTATATGGCGTCTATCTTCACCAATCGTTCGGAAGTCGTCAGG
CGCATGTGGCAGACCCGCCCGGCCCATTGGGCGGAGTTGTTCAAGGGCGGGTTGCGGGTCAGCCAGTTCAATATCGAGAA
AGTGCTGGATGTTTTTCTGCCCGACAGCTTCCCATCCAATGTGGAAGACCTGAAAATTCCCATAACCATTACGGCGGTGG
ATTTTCATGGCGCGCGGGAGATTCATATAAGCGATGGTGATTTACGCTCGGCCATAGCTGCGTCCTGCGCCATTCCACCC
GTTTTTGCGCCGGTGCGCCGCAATGGCCGCATTCTGGTCGATGGCGGGCTGTTCAATCCGGTGCCGTTCGACCTCCTTTT
CGACAAGGCGGATATCGTCATCGGCATCGATGTGGTGGGAGGCCCGGTCGGCCCCGACGATCATATGCCCACCACGTTTG
AGGCGGTGATCGGCACCAGCCAGCTTACCATGTGCTCGATCATTGAAAACAAGTTCCGCTATCGCCCGCCGCATATTTTC
GTCAGGCCCAATGTGGAGCGGATCGGGCTGCTTGATTTCCTGAAATTCGAGCAGGTCATAAGCCAGAGCGCAGCGGTGCG
GGACGAGTTGAAACGCGCGATCGAACAGGCGCTCGATGGCAAGGTCGCCCCGATCCTGCCGGAAAAATTGCCTGATCTTT
GA

Upstream 100 bases:

>100_bases
GCTGTCACGCTGGATCAGGTCAAGGCCATTGCCTGGAAACTGCTTCAGGCCGAGCCTGCGATCCTGATCTATGGACCGGC
GCAAAGTTAAAAGGTGTCCC

Downstream 100 bases:

>100_bases
TAAGGAAGCGGGTTACTCCGCGGCAACGGGTGCGGCGGCCGTTTCCTGCGGGGATGGCGCGCGCTGCCCATCGTCCGATT
TGTCGATGCGCTGGCCCTCG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MDKALSSSPRFAVAFGGGGARGIAHIHVVDVLNELGIQPVAIAGSSIGSIIGSSMANGMSGKDIYDYMASIFTNRSEVVR
RMWQTRPAHWAELFKGGLRVSQFNIEKVLDVFLPDSFPSNVEDLKIPITITAVDFHGAREIHISDGDLRSAIAASCAIPP
VFAPVRRNGRILVDGGLFNPVPFDLLFDKADIVIGIDVVGGPVGPDDHMPTTFEAVIGTSQLTMCSIIENKFRYRPPHIF
VRPNVERIGLLDFLKFEQVISQSAAVRDELKRAIEQALDGKVAPILPEKLPDL

Sequences:

>Translated_293_residues
MDKALSSSPRFAVAFGGGGARGIAHIHVVDVLNELGIQPVAIAGSSIGSIIGSSMANGMSGKDIYDYMASIFTNRSEVVR
RMWQTRPAHWAELFKGGLRVSQFNIEKVLDVFLPDSFPSNVEDLKIPITITAVDFHGAREIHISDGDLRSAIAASCAIPP
VFAPVRRNGRILVDGGLFNPVPFDLLFDKADIVIGIDVVGGPVGPDDHMPTTFEAVIGTSQLTMCSIIENKFRYRPPHIF
VRPNVERIGLLDFLKFEQVISQSAAVRDELKRAIEQALDGKVAPILPEKLPDL
>Mature_293_residues
MDKALSSSPRFAVAFGGGGARGIAHIHVVDVLNELGIQPVAIAGSSIGSIIGSSMANGMSGKDIYDYMASIFTNRSEVVR
RMWQTRPAHWAELFKGGLRVSQFNIEKVLDVFLPDSFPSNVEDLKIPITITAVDFHGAREIHISDGDLRSAIAASCAIPP
VFAPVRRNGRILVDGGLFNPVPFDLLFDKADIVIGIDVVGGPVGPDDHMPTTFEAVIGTSQLTMCSIIENKFRYRPPHIF
VRPNVERIGLLDFLKFEQVISQSAAVRDELKRAIEQALDGKVAPILPEKLPDL

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=194, Percent_Identity=31.9587628865979, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI260656041, Length=195, Percent_Identity=31.7948717948718, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI116256487, Length=195, Percent_Identity=31.7948717948718, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI260656037, Length=195, Percent_Identity=31.7948717948718, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI260656043, Length=195, Percent_Identity=31.7948717948718, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI226510936, Length=294, Percent_Identity=28.9115646258503, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31839; Mature: 31839

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKALSSSPRFAVAFGGGGARGIAHIHVVDVLNELGIQPVAIAGSSIGSIIGSSMANGMS
CCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCC
GKDIYDYMASIFTNRSEVVRRMWQTRPAHWAELFKGGLRVSQFNIEKVLDVFLPDSFPSN
CHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCCC
VEDLKIPITITAVDFHGAREIHISDGDLRSAIAASCAIPPVFAPVRRNGRILVDGGLFNP
CCCEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCCHHHCCCCEEEEECCCCCC
VPFDLLFDKADIVIGIDVVGGPVGPDDHMPTTFEAVIGTSQLTMCSIIENKFRYRPPHIF
CCHHHEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCEEE
VRPNVERIGLLDFLKFEQVISQSAAVRDELKRAIEQALDGKVAPILPEKLPDL
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDKALSSSPRFAVAFGGGGARGIAHIHVVDVLNELGIQPVAIAGSSIGSIIGSSMANGMS
CCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCC
GKDIYDYMASIFTNRSEVVRRMWQTRPAHWAELFKGGLRVSQFNIEKVLDVFLPDSFPSN
CHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCCC
VEDLKIPITITAVDFHGAREIHISDGDLRSAIAASCAIPPVFAPVRRNGRILVDGGLFNP
CCCEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCCHHHCCCCEEEEECCCCCC
VPFDLLFDKADIVIGIDVVGGPVGPDDHMPTTFEAVIGTSQLTMCSIIENKFRYRPPHIF
CCHHHEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCEEE
VRPNVERIGLLDFLKFEQVISQSAAVRDELKRAIEQALDGKVAPILPEKLPDL
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]