Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
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Accession | NC_012442 |
Length | 1,185,518 |
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The map label for this gene is ygbL [C]
Identifier: 225686002
GI number: 225686002
Start: 136649
End: 137281
Strand: Reverse
Name: ygbL [C]
Synonym: BMEA_B0145
Alternate gene names: 225686002
Gene position: 137281-136649 (Counterclockwise)
Preceding gene: 225686003
Following gene: 225686001
Centisome position: 11.58
GC content: 56.56
Gene sequence:
>633_bases ATGACAGAACAAGAAATTCGCGAGCTTATCGTCGAGCTTGGTGCCAGCCTTTTTGCTCGCGGATATTGCGTGGGCAGTGC TGGAAATATCAGTGTTCGCCTGGCAGACGGCTATTTGATGACGCCTACAAATTCATGCCTTGGGCGTCTCAGGGCAGACC GTCTGAGCAAACTGGACAAGGGCTGGAACCATATTGGCGGCGACCGCCCGTCAAAAGAAGTTTTCATGCACCGCGCGGTT CTTGGCGCACGCCCGCAGGCCGGGGCGGTTGTTCACCTTCATTCGACCTACGCGACTGCCATCAGTTGCCTCAGCAGCCC GGCAGACACTATGCCGATAACCCCGCTCACGCCCTATTTCGTGATGCGGATCGGCAAACACCTTCCCACCATTCCTTATT ACCGCCCCGGCGACCCTGCCATGGAGCGGGAAATCCACGACGCCGCCCAAAATGCCTCCGCCATGTTGCTTGCCAATCAT GGTCCGGTTGTTTCCGGCAATTCCCTTGTGGATGCCGTTTATGCTGCCGAGGAACTCGAAGAATCCGCGCGCCTTTCCAT CATGCTTCAGGGCTTGCCCGCCCGAAAGCTGACAGACGAGCAGATTGAGGACCTTCTCCATACCTTTAAATAA
Upstream 100 bases:
>100_bases CTTGGTTTTACACGCGATGCCGATTTCGACGCGGTCGTGCGCCAATATCGGGACGAGTTTGCACACTCTTCCTGATGGCC ACAAATTTGGAACAAAGAAC
Downstream 100 bases:
>100_bases TTTTCCGCTTCCGGGAGTGAAAGCAATGAAAAACAGCAATACAGCCATCACCTCGCCTGAGGTGGTGGAGAACATGACCT ATCGCAAAGTCGCGTTTCGC
Product: putative aldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTEQEIRELIVELGASLFARGYCVGSAGNISVRLADGYLMTPTNSCLGRLRADRLSKLDKGWNHIGGDRPSKEVFMHRAV LGARPQAGAVVHLHSTYATAISCLSSPADTMPITPLTPYFVMRIGKHLPTIPYYRPGDPAMEREIHDAAQNASAMLLANH GPVVSGNSLVDAVYAAEELEESARLSIMLQGLPARKLTDEQIEDLLHTFK
Sequences:
>Translated_210_residues MTEQEIRELIVELGASLFARGYCVGSAGNISVRLADGYLMTPTNSCLGRLRADRLSKLDKGWNHIGGDRPSKEVFMHRAV LGARPQAGAVVHLHSTYATAISCLSSPADTMPITPLTPYFVMRIGKHLPTIPYYRPGDPAMEREIHDAAQNASAMLLANH GPVVSGNSLVDAVYAAEELEESARLSIMLQGLPARKLTDEQIEDLLHTFK >Mature_209_residues TEQEIRELIVELGASLFARGYCVGSAGNISVRLADGYLMTPTNSCLGRLRADRLSKLDKGWNHIGGDRPSKEVFMHRAVL GARPQAGAVVHLHSTYATAISCLSSPADTMPITPLTPYFVMRIGKHLPTIPYYRPGDPAMEREIHDAAQNASAMLLANHG PVVSGNSLVDAVYAAEELEESARLSIMLQGLPARKLTDEQIEDLLHTFK
Specific function: Unknown
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789094, Length=205, Percent_Identity=48.780487804878, Blast_Score=191, Evalue=3e-50, Organism=Escherichia coli, GI1789164, Length=213, Percent_Identity=30.9859154929577, Blast_Score=93, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001303 [H]
Pfam domain/function: PF00596 Aldolase_II [H]
EC number: NA
Molecular weight: Translated: 22881; Mature: 22749
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQEIRELIVELGASLFARGYCVGSAGNISVRLADGYLMTPTNSCLGRLRADRLSKLDK CCHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHHH GWNHIGGDRPSKEVFMHRAVLGARPQAGAVVHLHSTYATAISCLSSPADTMPITPLTPYF HHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCHHH VMRIGKHLPTIPYYRPGDPAMEREIHDAAQNASAMLLANHGPVVSGNSLVDAVYAAEELE HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEECCCHHHHHHHHHHHHH ESARLSIMLQGLPARKLTDEQIEDLLHTFK HHHHEEEEECCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TEQEIRELIVELGASLFARGYCVGSAGNISVRLADGYLMTPTNSCLGRLRADRLSKLDK CHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHHH GWNHIGGDRPSKEVFMHRAVLGARPQAGAVVHLHSTYATAISCLSSPADTMPITPLTPYF HHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCHHH VMRIGKHLPTIPYYRPGDPAMEREIHDAAQNASAMLLANHGPVVSGNSLVDAVYAAEELE HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEECCCHHHHHHHHHHHHH ESARLSIMLQGLPARKLTDEQIEDLLHTFK HHHHEEEEECCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]