Click here to switch to the map view.

The map label for this gene is 225685925

Identifier: 225685925

GI number: 225685925

Start: 56161

End: 56679

Strand: Reverse

Name: 225685925

Synonym: BMEA_B0062

Alternate gene names: NA

Gene position: 56679-56161 (Counterclockwise)

Preceding gene: 225685926

Following gene: 225685924

Centisome position: 4.78

GC content: 57.61

Gene sequence:

>519_bases
ATGCGCACATTGGTTATGGTCGCATGCGCTGTCTCTCTGGCCGCTTGTTCCAGCCCGCCGAAGCCGCCCACAGTCAGCGG
ACGCCACCGCATTCCGATAAACAGCCCGGCGGCACAAGAGGAACTGCGCTTGCAGGTTTTCCCGCAAGAACCCACCGCGC
AAGCAACCATGTGGCCAGCACGACCGCCCAAACAAACAGTCAACGTGTATTTTCCCCAGGATGTGACGGTATTCCGGCCA
ACATCCGCACAGATAAACCAACTCCACACACTGCTCTGGCCCGTGCCCAAGCATATCAACGTCAGGGGCCTGACGGACAA
CAGCTGCCCTCCTCCCGGTGATACGCAAGTCGCGCGTGTCCGTGCGCTGGCTATCTATAATTGGCTGATCAATCAAGGCG
TACCCGCCAGCAGGATCACCATAAGCTATGCCCCGGTAAAAGATTACGCATCAAATGCCCCCCTTTCACCGGGCCGCGTC
CTGAACAGGCGCGTGGATATCGAAATTTTACGCAAGTAA

Upstream 100 bases:

>100_bases
CTTCTCGCCAACACAAGCTCTGTGCAGCCGCATATCACGCATATGCTGCACAAATTTATAATCCCGGTGCCCGCACTCAC
CCGAAAATGGAGTCTACACA

Downstream 100 bases:

>100_bases
CCTGCGAGGCCTATCGCAAAGACACGCATTTTCTCAAAAATGCCATCCATGTTCTCCGGATCATGAAGACCTATAGAGCG
GTTCCTATTTTTACAAAGCC

Product: TraQ protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQEELRLQVFPQEPTAQATMWPARPPKQTVNVYFPQDVTVFRP
TSAQINQLHTLLWPVPKHINVRGLTDNSCPPPGDTQVARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSPGRV
LNRRVDIEILRK

Sequences:

>Translated_172_residues
MRTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQEELRLQVFPQEPTAQATMWPARPPKQTVNVYFPQDVTVFRP
TSAQINQLHTLLWPVPKHINVRGLTDNSCPPPGDTQVARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSPGRV
LNRRVDIEILRK
>Mature_172_residues
MRTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQEELRLQVFPQEPTAQATMWPARPPKQTVNVYFPQDVTVFRP
TSAQINQLHTLLWPVPKHINVRGLTDNSCPPPGDTQVARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSPGRV
LNRRVDIEILRK

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 19001; Mature: 19001

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQEELRLQVFPQEPTAQATMWPA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCEEECCC
RPPKQTVNVYFPQDVTVFRPTSAQINQLHTLLWPVPKHINVRGLTDNSCPPPGDTQVARV
CCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHH
RALAIYNWLINQGVPASRITISYAPVKDYASNAPLSPGRVLNRRVDIEILRK
HHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCCCCCHHHHEECCEEEECC
>Mature Secondary Structure
MRTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQEELRLQVFPQEPTAQATMWPA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCEEECCC
RPPKQTVNVYFPQDVTVFRPTSAQINQLHTLLWPVPKHINVRGLTDNSCPPPGDTQVARV
CCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHH
RALAIYNWLINQGVPASRITISYAPVKDYASNAPLSPGRVLNRRVDIEILRK
HHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCCCCCHHHHEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA