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The map label for this gene is 225685889

Identifier: 225685889

GI number: 225685889

Start: 18639

End: 19163

Strand: Direct

Name: 225685889

Synonym: BMEA_B0023

Alternate gene names: NA

Gene position: 18639-19163 (Clockwise)

Preceding gene: 225685885

Following gene: 225685890

Centisome position: 1.57

GC content: 59.62

Gene sequence:

>525_bases
TTGAAGGCCCTGATGTTGTTGGCGCTGGATGGAAATAGTGCGGCTTACCGGACGCTGCTTGAAGAGCTTTCGCGTCTCCT
GAAAGCCTATTTCGTTCGGCGGCTTTTCGGCGGCAGAGTTTCGGAAGCCGAAGATCTGGTGCAGGAAACGCTGCTGGCGA
TCCATACGCGCCGCATGACCTATGATCGTGAAATGACATTTCTGCCATGGGTCAATGCCATTGCGCGGCACAAGCTGGTT
GATCACCTGCGCCGTCAGGGCCGCCACGACACCGATGTGCTGGACGAGGATATTGCCATTCCAGGCGAGGCGGCAAATGT
GGAAGCGCGCATGGATGTGGATCGTATGCTGGGCGGCGTTTCGGAGCGGACCGCCGGTCTGATCCGCAAGGTGAAGATCG
AGGGACAATCGATTGACGAGGCCGCGCGGGCGGGCGACATGAGCCAGAGCGCGGTCAAGGTGGCGATCCATCGCGGCCTT
GCCACGCTGGCGCAGCGGTTTGGAGGCAAGAAAGATAACCGATGA

Upstream 100 bases:

>100_bases
CGCCGATGTGATCGCTCGGGATGCGGATGTAACCTTTTTCGTCCCTATCGCGAATAAGACGACAGGAGAAACGAGACTGG
CCCGTTCTAATGAAGAGAGG

Downstream 100 bases:

>100_bases
CCTGATCAACCGCCTGACGGGCGAGCTGAAGCCGGTGTCGCGCCATGCCATGCAGAGGCTGCTATTGGGACATGCGCTTT
TGGGCATGGTTGCGGGCGTG

Product: RNA polymerase sigma factor, sigma-70 family protein

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma-; RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma Factor Protein; RNA Polymerase Sigma-E Factor Protein; ECF-Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Q Factor; Extracytoplasmic Function AlteRNAtive Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily Protein; RNA Polymerase Sigma-24 Factor; ECF-Type Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma Factor NccH; RNA Polymerase Sigma Subunit; RNA Polymerase Sigma Factor Sigma-70 Family; ECF Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; Sigma-70 Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKALMLLALDGNSAAYRTLLEELSRLLKAYFVRRLFGGRVSEAEDLVQETLLAIHTRRMTYDREMTFLPWVNAIARHKLV
DHLRRQGRHDTDVLDEDIAIPGEAANVEARMDVDRMLGGVSERTAGLIRKVKIEGQSIDEAARAGDMSQSAVKVAIHRGL
ATLAQRFGGKKDNR

Sequences:

>Translated_174_residues
MKALMLLALDGNSAAYRTLLEELSRLLKAYFVRRLFGGRVSEAEDLVQETLLAIHTRRMTYDREMTFLPWVNAIARHKLV
DHLRRQGRHDTDVLDEDIAIPGEAANVEARMDVDRMLGGVSERTAGLIRKVKIEGQSIDEAARAGDMSQSAVKVAIHRGL
ATLAQRFGGKKDNR
>Mature_174_residues
MKALMLLALDGNSAAYRTLLEELSRLLKAYFVRRLFGGRVSEAEDLVQETLLAIHTRRMTYDREMTFLPWVNAIARHKLV
DHLRRQGRHDTDVLDEDIAIPGEAANVEARMDVDRMLGGVSERTAGLIRKVKIEGQSIDEAARAGDMSQSAVKVAIHRGL
ATLAQRFGGKKDNR

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19497; Mature: 19497

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALMLLALDGNSAAYRTLLEELSRLLKAYFVRRLFGGRVSEAEDLVQETLLAIHTRRMT
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
YDREMTFLPWVNAIARHKLVDHLRRQGRHDTDVLDEDIAIPGEAANVEARMDVDRMLGGV
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHCCHHHHHCCH
SERTAGLIRKVKIEGQSIDEAARAGDMSQSAVKVAIHRGLATLAQRFGGKKDNR
HHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKALMLLALDGNSAAYRTLLEELSRLLKAYFVRRLFGGRVSEAEDLVQETLLAIHTRRMT
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
YDREMTFLPWVNAIARHKLVDHLRRQGRHDTDVLDEDIAIPGEAANVEARMDVDRMLGGV
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHCCHHHHHCCH
SERTAGLIRKVKIEGQSIDEAARAGDMSQSAVKVAIHRGLATLAQRFGGKKDNR
HHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA