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The map label for this gene is 225852169

Identifier: 225852169

GI number: 225852169

Start: 659744

End: 660415

Strand: Reverse

Name: 225852169

Synonym: BMEA_A0685

Alternate gene names: NA

Gene position: 660415-659744 (Counterclockwise)

Preceding gene: 225852170

Following gene: 225852166

Centisome position: 31.07

GC content: 58.18

Gene sequence:

>672_bases
ATGATTTCCGAACCTTCGCCAAATTGCTCAATCTGCCCGCGGCTCCATGCGTTCTTACAGGAATGGCGACAAAAGGAGCC
TGCGTGGCATAACGCGCCCGTCCCCCCTTTCCTTCCCGGGAGCGATGAAGACGTTCGGCTTCTGATCGTAGGGCTTGCCC
CCGGCCTTCGCGGAGCCAACCGCACGGGACGGCCCTTTACCGGCGATTATGCCGGGGAACTTCTTTACAGTACGCTTTGC
GAATTCGGCTTCGCGACGGGAAAATTCGAGGCGCGCCCGGATGACAGCCTGCGGCTTCTCGATGCCTGCATCGTCAATGC
GGTTCGCTGCGTGCCGCCGGAAAACAAGCCTGTCGGCAGCGAAATCAACAATTGCCGGCAATTCCTGACACCGATGCTGA
CGCGCTTTCCCAATCTCGATGCAGTGGTCACACTGGGGACCATCGCCCATCAATCAACAGTGCGCGCCTTAGGCGTTCCG
GTTTCGCGCCACCCGTTCGGCCATGGCAAGGCCACCGATATCGGGCCATTGCGGATTTTTTCCAGCTATCATTGCTCGCG
CTACAACACGAATACGGGCGTGCTGACCGATGCGATGTTCCGCGATGTTTTCAAAAATGTACGCGCTTATCTAAGCGAGA
AAGCAGCCGGAAGCGCACGTCTGTCTGTCTGA

Upstream 100 bases:

>100_bases
TGAAATAGGCCGCGATCCTTCCGAACGTGCCCCGCGCCGTCAGGAAGAGGATTTCGACGAGAGCTATTGACGTTGCCGTT
GGCCCGGTTCATGCAAGGGC

Downstream 100 bases:

>100_bases
ATGATAGATCGGCGTTCCAACCGTTTTTTATGACACATACCCCGAACACCGCTTCGCACTTTTCGGGATACAGATCTTTC
CTTGCGCGCATCTTATCCGA

Product: uracil-DNA glycosylase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MISEPSPNCSICPRLHAFLQEWRQKEPAWHNAPVPPFLPGSDEDVRLLIVGLAPGLRGANRTGRPFTGDYAGELLYSTLC
EFGFATGKFEARPDDSLRLLDACIVNAVRCVPPENKPVGSEINNCRQFLTPMLTRFPNLDAVVTLGTIAHQSTVRALGVP
VSRHPFGHGKATDIGPLRIFSSYHCSRYNTNTGVLTDAMFRDVFKNVRAYLSEKAAGSARLSV

Sequences:

>Translated_223_residues
MISEPSPNCSICPRLHAFLQEWRQKEPAWHNAPVPPFLPGSDEDVRLLIVGLAPGLRGANRTGRPFTGDYAGELLYSTLC
EFGFATGKFEARPDDSLRLLDACIVNAVRCVPPENKPVGSEINNCRQFLTPMLTRFPNLDAVVTLGTIAHQSTVRALGVP
VSRHPFGHGKATDIGPLRIFSSYHCSRYNTNTGVLTDAMFRDVFKNVRAYLSEKAAGSARLSV
>Mature_223_residues
MISEPSPNCSICPRLHAFLQEWRQKEPAWHNAPVPPFLPGSDEDVRLLIVGLAPGLRGANRTGRPFTGDYAGELLYSTLC
EFGFATGKFEARPDDSLRLLDACIVNAVRCVPPENKPVGSEINNCRQFLTPMLTRFPNLDAVVTLGTIAHQSTVRALGVP
VSRHPFGHGKATDIGPLRIFSSYHCSRYNTNTGVLTDAMFRDVFKNVRAYLSEKAAGSARLSV

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1259 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 24468; Mature: 24468

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISEPSPNCSICPRLHAFLQEWRQKEPAWHNAPVPPFLPGSDEDVRLLIVGLAPGLRGAN
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
RTGRPFTGDYAGELLYSTLCEFGFATGKFEARPDDSLRLLDACIVNAVRCVPPENKPVGS
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH
EINNCRQFLTPMLTRFPNLDAVVTLGTIAHQSTVRALGVPVSRHPFGHGKATDIGPLRIF
HHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
SSYHCSRYNTNTGVLTDAMFRDVFKNVRAYLSEKAAGSARLSV
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MISEPSPNCSICPRLHAFLQEWRQKEPAWHNAPVPPFLPGSDEDVRLLIVGLAPGLRGAN
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
RTGRPFTGDYAGELLYSTLCEFGFATGKFEARPDDSLRLLDACIVNAVRCVPPENKPVGS
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH
EINNCRQFLTPMLTRFPNLDAVVTLGTIAHQSTVRALGVPVSRHPFGHGKATDIGPLRIF
HHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
SSYHCSRYNTNTGVLTDAMFRDVFKNVRAYLSEKAAGSARLSV
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]