Definition | Wolbachia sp. wRi, complete genome. |
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Accession | NC_012416 |
Length | 1,445,873 |
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The map label for this gene is 225630110
Identifier: 225630110
GI number: 225630110
Start: 304561
End: 305145
Strand: Direct
Name: 225630110
Synonym: WRi_002900
Alternate gene names: NA
Gene position: 304561-305145 (Clockwise)
Preceding gene: 225630106
Following gene: 225630111
Centisome position: 21.06
GC content: 39.66
Gene sequence:
>585_bases ATGGTGGGTGTAATTTATTTAGCGATGCTGGGCGTGGCAGCAATAATAGGAGCTATAATAGGCACTTTAATAGGTCTCTT ACTAAGTTTCACTAGTCTTTCACCTCTGATAATAGGCGGAACTGTTGGAGCCATCTATGTAGTGCCATTAATTGCAGCTT TCATAACAATTCTTTTGTATCCAATTCCATATGAGCGTCATAGCGGGTTAACATTAAAAGAAACTGCGTGTCTAGCTGGC TTGTTTATTGGAAGTGTTGCAGCCGGAGTTGGCCTTGTTGCATGTGGCTTGACTCCAATAATTAAAGTAGATTCTTTATC AACTACAGTTAGTTCTTTGTTAGCTATGGGAGCTACAATACCAGTACTTCTGATTGCAACTGCAATTGGAGTAGCTATTG TAATCGAGCTCGCTAAGCAAGCTAAGGAGTACATATCAGGTAAAATAATGCAAGCAGAAAAAGAACCTGTGACTGATACA CATGAAGAACCAGGCTCTAAAATGGAAGAAGCAAAAGAAGAAAAAACTGCTAGAAATAAGCAGGCAGTACGGGAATGTTC AAAAAACTCACCTCAACCTGGTTAA
Upstream 100 bases:
>100_bases TCATTGTGGCTGCTTTTTGGGATTTTGCAACCTAAGGTGTGGGTTGACTTTTTTATTATGGTGTGTGAAACTAAAATGTT ATTAACATAGGGACAAAGTT
Downstream 100 bases:
>100_bases AATTTTCCTTAAAAGACAAATACAGAAAAACAAGAATATCAATAGCTTATTGTTTTAGCATTTACGATAAAGCAGTAAGC ATTTTAAGACTAGTTACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MVGVIYLAMLGVAAIIGAIIGTLIGLLLSFTSLSPLIIGGTVGAIYVVPLIAAFITILLYPIPYERHSGLTLKETACLAG LFIGSVAAGVGLVACGLTPIIKVDSLSTTVSSLLAMGATIPVLLIATAIGVAIVIELAKQAKEYISGKIMQAEKEPVTDT HEEPGSKMEEAKEEKTARNKQAVRECSKNSPQPG
Sequences:
>Translated_194_residues MVGVIYLAMLGVAAIIGAIIGTLIGLLLSFTSLSPLIIGGTVGAIYVVPLIAAFITILLYPIPYERHSGLTLKETACLAG LFIGSVAAGVGLVACGLTPIIKVDSLSTTVSSLLAMGATIPVLLIATAIGVAIVIELAKQAKEYISGKIMQAEKEPVTDT HEEPGSKMEEAKEEKTARNKQAVRECSKNSPQPG >Mature_194_residues MVGVIYLAMLGVAAIIGAIIGTLIGLLLSFTSLSPLIIGGTVGAIYVVPLIAAFITILLYPIPYERHSGLTLKETACLAG LFIGSVAAGVGLVACGLTPIIKVDSLSTTVSSLLAMGATIPVLLIATAIGVAIVIELAKQAKEYISGKIMQAEKEPVTDT HEEPGSKMEEAKEEKTARNKQAVRECSKNSPQPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20072; Mature: 20072
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGVIYLAMLGVAAIIGAIIGTLIGLLLSFTSLSPLIIGGTVGAIYVVPLIAAFITILLY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH PIPYERHSGLTLKETACLAGLFIGSVAAGVGLVACGLTPIIKVDSLSTTVSSLLAMGATI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH PVLLIATAIGVAIVIELAKQAKEYISGKIMQAEKEPVTDTHEEPGSKMEEAKEEKTARNK HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QAVRECSKNSPQPG HHHHHHHCCCCCCC >Mature Secondary Structure MVGVIYLAMLGVAAIIGAIIGTLIGLLLSFTSLSPLIIGGTVGAIYVVPLIAAFITILLY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH PIPYERHSGLTLKETACLAGLFIGSVAAGVGLVACGLTPIIKVDSLSTTVSSLLAMGATI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH PVLLIATAIGVAIVIELAKQAKEYISGKIMQAEKEPVTDTHEEPGSKMEEAKEEKTARNK HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QAVRECSKNSPQPG HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA