Click here to switch to the map view.

The map label for this gene is yfhC [C]

Identifier: 225630106

GI number: 225630106

Start: 299685

End: 300092

Strand: Direct

Name: yfhC [C]

Synonym: WRi_002860

Alternate gene names: 225630106

Gene position: 299685-300092 (Clockwise)

Preceding gene: 225630105

Following gene: 225630110

Centisome position: 20.73

GC content: 38.73

Gene sequence:

>408_bases
ATGGAGCTTGCCATAGAGCAAGCCAAACTCGCTCAAAAAAATGATGAGGTGCCCATAGGTGCTGTAATAGTGAGTGGAGA
CAATATCATTTCTTCTGCACACAATATATCCAGCGATCCAACTGCACATGCAGAGATGTTAGCGATCAGACAAGCATTTT
CAACTTCCACGCTTTGTGATACTGATATGTACGTAACATTAGAACCATGTCCGATGTGTGCTCAAGCTATTTCCTTTGCC
AGAATTAAACGATTGTACTTTGGAGCTTATAATCCCAAAGGTGGAGGAATCGAAAATGGTGCTAAGATATTTCAATTTTG
CAGCCATATACCTGAAGTTTATGGTGGGATATTAGAAACAGAATGCTCTTTTTTGTTAAAGGATTTTTTTGAGAAATTGA
GAACATAG

Upstream 100 bases:

>100_bases
GAGTTTCAATCAAAGCCGTTTTCTCCTCATCCTCTTTTTGTATCATTTATTGAAGCAGCAATTGATAAGAAATAAGTGCC
TAGTGTTTAAGTATCAATAT

Downstream 100 bases:

>100_bases
TTTAAGTCTATCAATTGTCATTTGCTTGCTTATCTCTGAAACTATCTTCACTTTTTTCCATATAGCCGCCTCTAGTCTAA
CTGTGCAGATCGATTTGCTG

Product: cytidine and deoxycytidylate deaminase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHNISSDPTAHAEMLAIRQAFSTSTLCDTDMYVTLEPCPMCAQAISFA
RIKRLYFGAYNPKGGGIENGAKIFQFCSHIPEVYGGILETECSFLLKDFFEKLRT

Sequences:

>Translated_135_residues
MELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHNISSDPTAHAEMLAIRQAFSTSTLCDTDMYVTLEPCPMCAQAISFA
RIKRLYFGAYNPKGGGIENGAKIFQFCSHIPEVYGGILETECSFLLKDFFEKLRT
>Mature_135_residues
MELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHNISSDPTAHAEMLAIRQAFSTSTLCDTDMYVTLEPCPMCAQAISFA
RIKRLYFGAYNPKGGGIENGAKIFQFCSHIPEVYGGILETECSFLLKDFFEKLRT

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=108, Percent_Identity=34.2592592592593, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI145693172, Length=142, Percent_Identity=40.8450704225352, Blast_Score=100, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17541138, Length=144, Percent_Identity=34.0277777777778, Blast_Score=81, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17554608, Length=112, Percent_Identity=39.2857142857143, Blast_Score=76, Evalue=6e-15,
Organism=Drosophila melanogaster, GI21355527, Length=148, Percent_Identity=31.7567567567568, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 14783; Mature: 14783

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHNISSDPTAHAEMLAIRQAFSTSTLCD
CCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
TDMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQFCSHIPEVYGGILET
CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
ECSFLLKDFFEKLRT
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHNISSDPTAHAEMLAIRQAFSTSTLCD
CCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
TDMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQFCSHIPEVYGGILET
CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
ECSFLLKDFFEKLRT
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA