Definition | Wolbachia sp. wRi, complete genome. |
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Accession | NC_012416 |
Length | 1,445,873 |
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The map label for this gene is pyrG [H]
Identifier: 225630105
GI number: 225630105
Start: 298055
End: 299659
Strand: Direct
Name: pyrG [H]
Synonym: WRi_002850
Alternate gene names: 225630105
Gene position: 298055-299659 (Clockwise)
Preceding gene: 225630104
Following gene: 225630106
Centisome position: 20.61
GC content: 37.88
Gene sequence:
>1605_bases ATGAAGGAAGCTAAATTTATCTTTGTCACAGGTGGAGTTGTGTCATCGCTTGGTAAAGGCTTAGTTGCTTCGAGTGTTGG TGCGCTTCTTCAAGCTCACGGTTTTAAGATCCGTATCAGAAAACTTGACCCGTATCTCAACATTGATCCTGGGACAATGA ACCCAACTCAGCACGGAGAGGTATTTGTTACCGAAGATGGTGCTGAAACTGATTTGGATCTTGGGCATTATGAGCGTTTT ACTGGAATTAAAGCAACAAAAGATGACAATATAACAACTGGTAAGATATATCATGAGTTATTGAAGAAAGAGAGGCGTGG TGATTATCTGGGCAAAACTGTGCAAGTCATTCCTCATGTAACAGATTTGATCAAATCGTTCATTTTTAATGGTACGGAAG GTTTAGATTTTGTAATATGTGAAATAGGCGGAACTGTAGGTGACATTGAAAGCCAACCATTTTTGGAGGCTATACGCCAA GTTAACTACACATTAGGAAAACAAAGAGTTATCCTTATTCACTTAACTTTAATACCATATCTTACCGCAGCGCAAGAATT AAAGACAAAGCCAACGCAGCATTCAGTTCGAGAGTTAAATTCCGCGGGGTTACAACCAGATATTATATTATGCCGCAGTG AGAAAGAAATTTTCGATAATCAAAGAGAGAAAATAGCTAAGCTTTGCAATGTTTCTTTATCCAATGTGATACCTGCCCCT GATGTGAGTCATATATATGAGTTACCGGTGTTGTATAGCCAATGTGGGCTTGATACGCAAATTTTGGAGCACTTTCATTT AAGTAAGCCAAAACCAAGCTTGACTGAATGGGATCAAATAGTGCATTCCATAAGGCACCCAACACAGGAAGTTACTGTAT CTATAGTGGGAAAATACACCGAATTCCCTGATGCATACAAATCACTGGTTGAAGCATTAAATCATGGTGCGATTAGTAAT AAAGTCAAAGTAAAGATAAATTGGGTTAACTCAAGAGAGAAGGAAGAAAAACCTATAAATGAAAAACTTATAGGAGAGAA ATTACAGAATTCTCATGCAATCCTTGTTCCAGGGGGGTTTGGTGATGACGGAGTAGAGGGTAAAATATTAGCAATAAATT ATGCCCGTACAAATAATATCCCATTTTTCGGAATTTGCCTTGGTATGCAGCTTGCAATTATTGAATTTGCTCGTAATGTT GTTAAGCTTGAAGATGCACACTCTGAAGAATTTCGTAACTGTAAACATCCAATCGTTAAGTTAGCTGGCGATCAAGATGA CGATCTTGGTGGAACCATGAGACTTGGGGCATACAAATGTAATATAAATGCAAACTCTAAAATGATGGATGCATATAGTA ACACTACTATTTCAGAAAGACACAGGCATAGATACATAATCAATTCAGATTATAAAGATGATTTGGAAAAAAATGGGCTG CTATGCAGTGGCATATCAGAAGATGGAACGTGCATAGAGGCAGTGGAGTTAGAGAGTCATCCGTGGTTTATTGGTGTGCA GTTTCATCCAGAGTTTCAATCAAAGCCGTTTTCTCCTCATCCTCTTTTTGTATCATTTATTGAAGCAGCAATTGATAAGA AATAA
Upstream 100 bases:
>100_bases GATTATGTTCAAAAGACGTACATAAAAAATCGATCGCAGAAAAAATTATATTAGAAAAAAAGCAAGAAAGTGAATCTACT TCTGTTCCATTTGAAAATTA
Downstream 100 bases:
>100_bases GTGCCTAGTGTTTAAGTATCAATATATGGAGCTTGCCATAGAGCAAGCCAAACTCGCTCAAAAAAATGATGAGGTGCCCA TAGGTGCTGTAATAGTGAGT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MKEAKFIFVTGGVVSSLGKGLVASSVGALLQAHGFKIRIRKLDPYLNIDPGTMNPTQHGEVFVTEDGAETDLDLGHYERF TGIKATKDDNITTGKIYHELLKKERRGDYLGKTVQVIPHVTDLIKSFIFNGTEGLDFVICEIGGTVGDIESQPFLEAIRQ VNYTLGKQRVILIHLTLIPYLTAAQELKTKPTQHSVRELNSAGLQPDIILCRSEKEIFDNQREKIAKLCNVSLSNVIPAP DVSHIYELPVLYSQCGLDTQILEHFHLSKPKPSLTEWDQIVHSIRHPTQEVTVSIVGKYTEFPDAYKSLVEALNHGAISN KVKVKINWVNSREKEEKPINEKLIGEKLQNSHAILVPGGFGDDGVEGKILAINYARTNNIPFFGICLGMQLAIIEFARNV VKLEDAHSEEFRNCKHPIVKLAGDQDDDLGGTMRLGAYKCNINANSKMMDAYSNTTISERHRHRYIINSDYKDDLEKNGL LCSGISEDGTCIEAVELESHPWFIGVQFHPEFQSKPFSPHPLFVSFIEAAIDKK
Sequences:
>Translated_534_residues MKEAKFIFVTGGVVSSLGKGLVASSVGALLQAHGFKIRIRKLDPYLNIDPGTMNPTQHGEVFVTEDGAETDLDLGHYERF TGIKATKDDNITTGKIYHELLKKERRGDYLGKTVQVIPHVTDLIKSFIFNGTEGLDFVICEIGGTVGDIESQPFLEAIRQ VNYTLGKQRVILIHLTLIPYLTAAQELKTKPTQHSVRELNSAGLQPDIILCRSEKEIFDNQREKIAKLCNVSLSNVIPAP DVSHIYELPVLYSQCGLDTQILEHFHLSKPKPSLTEWDQIVHSIRHPTQEVTVSIVGKYTEFPDAYKSLVEALNHGAISN KVKVKINWVNSREKEEKPINEKLIGEKLQNSHAILVPGGFGDDGVEGKILAINYARTNNIPFFGICLGMQLAIIEFARNV VKLEDAHSEEFRNCKHPIVKLAGDQDDDLGGTMRLGAYKCNINANSKMMDAYSNTTISERHRHRYIINSDYKDDLEKNGL LCSGISEDGTCIEAVELESHPWFIGVQFHPEFQSKPFSPHPLFVSFIEAAIDKK >Mature_534_residues MKEAKFIFVTGGVVSSLGKGLVASSVGALLQAHGFKIRIRKLDPYLNIDPGTMNPTQHGEVFVTEDGAETDLDLGHYERF TGIKATKDDNITTGKIYHELLKKERRGDYLGKTVQVIPHVTDLIKSFIFNGTEGLDFVICEIGGTVGDIESQPFLEAIRQ VNYTLGKQRVILIHLTLIPYLTAAQELKTKPTQHSVRELNSAGLQPDIILCRSEKEIFDNQREKIAKLCNVSLSNVIPAP DVSHIYELPVLYSQCGLDTQILEHFHLSKPKPSLTEWDQIVHSIRHPTQEVTVSIVGKYTEFPDAYKSLVEALNHGAISN KVKVKINWVNSREKEEKPINEKLIGEKLQNSHAILVPGGFGDDGVEGKILAINYARTNNIPFFGICLGMQLAIIEFARNV VKLEDAHSEEFRNCKHPIVKLAGDQDDDLGGTMRLGAYKCNINANSKMMDAYSNTTISERHRHRYIINSDYKDDLEKNGL LCSGISEDGTCIEAVELESHPWFIGVQFHPEFQSKPFSPHPLFVSFIEAAIDKK
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=549, Percent_Identity=44.08014571949, Blast_Score=476, Evalue=1e-134, Organism=Homo sapiens, GI28559085, Length=546, Percent_Identity=44.3223443223443, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI28559083, Length=546, Percent_Identity=44.3223443223443, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI221316689, Length=546, Percent_Identity=44.3223443223443, Blast_Score=459, Evalue=1e-129, Organism=Escherichia coli, GI1789142, Length=538, Percent_Identity=52.9739776951673, Blast_Score=574, Evalue=1e-165, Organism=Caenorhabditis elegans, GI25148299, Length=603, Percent_Identity=38.6401326699834, Blast_Score=414, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6319432, Length=562, Percent_Identity=41.2811387900356, Blast_Score=429, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6322563, Length=563, Percent_Identity=40.3197158081705, Blast_Score=422, Evalue=1e-119, Organism=Drosophila melanogaster, GI24664469, Length=549, Percent_Identity=43.3515482695811, Blast_Score=457, Evalue=1e-129, Organism=Drosophila melanogaster, GI21357815, Length=494, Percent_Identity=42.1052631578947, Blast_Score=392, Evalue=1e-109,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 59672; Mature: 59672
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEAKFIFVTGGVVSSLGKGLVASSVGALLQAHGFKIRIRKLDPYLNIDPGTMNPTQHGE CCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCE VFVTEDGAETDLDLGHYERFTGIKATKDDNITTGKIYHELLKKERRGDYLGKTVQVIPHV EEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCHHHHHHHHH TDLIKSFIFNGTEGLDFVICEIGGTVGDIESQPFLEAIRQVNYTLGKQRVILIHLTLIPY HHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHH LTAAQELKTKPTQHSVRELNSAGLQPDIILCRSEKEIFDNQREKIAKLCNVSLSNVIPAP HHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHCCCCC DVSHIYELPVLYSQCGLDTQILEHFHLSKPKPSLTEWDQIVHSIRHPTQEVTVSIVGKYT CHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHEEEEEEECCC EFPDAYKSLVEALNHGAISNKVKVKINWVNSREKEEKPINEKLIGEKLQNSHAILVPGGF CCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCC GDDGVEGKILAINYARTNNIPFFGICLGMQLAIIEFARNVVKLEDAHSEEFRNCKHPIVK CCCCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEE LAGDQDDDLGGTMRLGAYKCNINANSKMMDAYSNTTISERHRHRYIINSDYKDDLEKNGL ECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHCCCCHHHHHCCEEEECCCCHHHHHHCCE LCSGISEDGTCIEAVELESHPWFIGVQFHPEFQSKPFSPHPLFVSFIEAAIDKK EEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKEAKFIFVTGGVVSSLGKGLVASSVGALLQAHGFKIRIRKLDPYLNIDPGTMNPTQHGE CCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCE VFVTEDGAETDLDLGHYERFTGIKATKDDNITTGKIYHELLKKERRGDYLGKTVQVIPHV EEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCHHHHHHHHH TDLIKSFIFNGTEGLDFVICEIGGTVGDIESQPFLEAIRQVNYTLGKQRVILIHLTLIPY HHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHH LTAAQELKTKPTQHSVRELNSAGLQPDIILCRSEKEIFDNQREKIAKLCNVSLSNVIPAP HHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHCCCCC DVSHIYELPVLYSQCGLDTQILEHFHLSKPKPSLTEWDQIVHSIRHPTQEVTVSIVGKYT CHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHEEEEEEECCC EFPDAYKSLVEALNHGAISNKVKVKINWVNSREKEEKPINEKLIGEKLQNSHAILVPGGF CCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCC GDDGVEGKILAINYARTNNIPFFGICLGMQLAIIEFARNVVKLEDAHSEEFRNCKHPIVK CCCCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEE LAGDQDDDLGGTMRLGAYKCNINANSKMMDAYSNTTISERHRHRYIINSDYKDDLEKNGL ECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHCCCCHHHHHCCEEEECCCCHHHHHHCCE LCSGISEDGTCIEAVELESHPWFIGVQFHPEFQSKPFSPHPLFVSFIEAAIDKK EEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA