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The map label for this gene is yebA [C]

Identifier: 225630085

GI number: 225630085

Start: 275506

End: 276444

Strand: Direct

Name: yebA [C]

Synonym: WRi_002630

Alternate gene names: 225630085

Gene position: 275506-276444 (Clockwise)

Preceding gene: 225630084

Following gene: 225630086

Centisome position: 19.05

GC content: 34.19

Gene sequence:

>939_bases
ATGAGGCTGGTAATATTTGTATTGCTTTGTATTTTACCAGCATATGCTACTGAAACATCAACAGATCTTGCACAGCCATT
CCAGCATGGAATCAGAAAAAAAAAAGCTACTTTGACGACAGAAAGTGATAGAAAGTTGTTATTCATATCCAGTACCATAA
AATCTTCCTTTTTTGCCACGGAAGGGTTGGCGCCAAATACAGTGGTGAAATTGATCAACATATATAAAGATTTTGGTGTT
GATTTTAAAAAAGACATTGTGCCAGAGAGTAAATTGGAGGTTCTTTTTGAGAGATTGCCTAATAATCAGAAGACTGAAGA
AAAAATTTTATATGCTTCACTGACAATAAACAAGAAAGCTATTAGTTTATATCATTATAAATCGCAAGACGGCAAAGAAA
GGTATTTTAATAAAGAAGGAATAAGCTTAAAAAATGGCGAAATTTTTGCAAATCCTTTAAATGGAGATTATCGCATATCC
TCAAAATTTGGCAATAGAAAGCATCCTGTTCGCGGTAAAATTGCTTTTCACAAAGGAGTGGATTATGCAGCTAAACTTGG
CACTCCCATATACGCTGCTGCAGAGGGTGTGATAGAATATATAGGAAAGAATGGTGGCTATGGAAATTACATCAAAATAA
AACACAAAAATGAATATTCAACCTGTTACGCGCATATAAGTAGATTTAGTGGCGATATAAAGTTAGGCTCTAAAGTAAAG
CAGGGGCAGATCATCGCTTATGTTGGTAGCACTGGTGTTGCAACAGGACCCCATTTACATTACGAAGTTATATATAATGG
CAAACACATTGATCCGCTTACGATAGCACATAAAACTGAAGTAAAATTGCCTGATCATGAATTAAGAGAGTTTAAACTAT
TTGTAAATAAGATAAATAAAACGATCAACAGAGAGAGTTCAAGTGAAAAAGAAGTTTAA

Upstream 100 bases:

>100_bases
ATAAAGAGTTGATTGATAAATTATCTGCATTGGTTGAAGAGCTAGAAGATAACGACGATGTACAGTATGTGGAAGGTAAT
TTTACTTTTGTTGATAAGCT

Downstream 100 bases:

>100_bases
AGACAATATGGATAAGAATACGATAAACGATAGAAATTTGAGTCAAATTCGGGCTTTTCCTGTACTAATAGCGCTAGGAT
TAATTTTATCGCTGCTTTTT

Product: M23/M37 peptidase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRLVIFVLLCILPAYATETSTDLAQPFQHGIRKKKATLTTESDRKLLFISSTIKSSFFATEGLAPNTVVKLINIYKDFGV
DFKKDIVPESKLEVLFERLPNNQKTEEKILYASLTINKKAISLYHYKSQDGKERYFNKEGISLKNGEIFANPLNGDYRIS
SKFGNRKHPVRGKIAFHKGVDYAAKLGTPIYAAAEGVIEYIGKNGGYGNYIKIKHKNEYSTCYAHISRFSGDIKLGSKVK
QGQIIAYVGSTGVATGPHLHYEVIYNGKHIDPLTIAHKTEVKLPDHELREFKLFVNKINKTINRESSSEKEV

Sequences:

>Translated_312_residues
MRLVIFVLLCILPAYATETSTDLAQPFQHGIRKKKATLTTESDRKLLFISSTIKSSFFATEGLAPNTVVKLINIYKDFGV
DFKKDIVPESKLEVLFERLPNNQKTEEKILYASLTINKKAISLYHYKSQDGKERYFNKEGISLKNGEIFANPLNGDYRIS
SKFGNRKHPVRGKIAFHKGVDYAAKLGTPIYAAAEGVIEYIGKNGGYGNYIKIKHKNEYSTCYAHISRFSGDIKLGSKVK
QGQIIAYVGSTGVATGPHLHYEVIYNGKHIDPLTIAHKTEVKLPDHELREFKLFVNKINKTINRESSSEKEV
>Mature_312_residues
MRLVIFVLLCILPAYATETSTDLAQPFQHGIRKKKATLTTESDRKLLFISSTIKSSFFATEGLAPNTVVKLINIYKDFGV
DFKKDIVPESKLEVLFERLPNNQKTEEKILYASLTINKKAISLYHYKSQDGKERYFNKEGISLKNGEIFANPLNGDYRIS
SKFGNRKHPVRGKIAFHKGVDYAAKLGTPIYAAAEGVIEYIGKNGGYGNYIKIKHKNEYSTCYAHISRFSGDIKLGSKVK
QGQIIAYVGSTGVATGPHLHYEVIYNGKHIDPLTIAHKTEVKLPDHELREFKLFVNKINKTINRESSSEKEV

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=248, Percent_Identity=32.6612903225806, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI87082174, Length=117, Percent_Identity=42.7350427350427, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789099, Length=116, Percent_Identity=37.9310344827586, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 35168; Mature: 35168

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVIFVLLCILPAYATETSTDLAQPFQHGIRKKKATLTTESDRKLLFISSTIKSSFFAT
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEECCCCEEEEEEHHHHHHHHHC
EGLAPNTVVKLINIYKDFGVDFKKDIVPESKLEVLFERLPNNQKTEEKILYASLTINKKA
CCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCEE
ISLYHYKSQDGKERYFNKEGISLKNGEIFANPLNGDYRISSKFGNRKHPVRGKIAFHKGV
EEEEEECCCCCHHHHCCCCCCEEECCEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCC
DYAAKLGTPIYAAAEGVIEYIGKNGGYGNYIKIKHKNEYSTCYAHISRFSGDIKLGSKVK
CHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCC
QGQIIAYVGSTGVATGPHLHYEVIYNGKHIDPLTIAHKTEVKLPDHELREFKLFVNKINK
CCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
TINRESSSEKEV
HHCCCCCCCCCC
>Mature Secondary Structure
MRLVIFVLLCILPAYATETSTDLAQPFQHGIRKKKATLTTESDRKLLFISSTIKSSFFAT
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEECCCCEEEEEEHHHHHHHHHC
EGLAPNTVVKLINIYKDFGVDFKKDIVPESKLEVLFERLPNNQKTEEKILYASLTINKKA
CCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCEE
ISLYHYKSQDGKERYFNKEGISLKNGEIFANPLNGDYRISSKFGNRKHPVRGKIAFHKGV
EEEEEECCCCCHHHHCCCCCCEEECCEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCC
DYAAKLGTPIYAAAEGVIEYIGKNGGYGNYIKIKHKNEYSTCYAHISRFSGDIKLGSKVK
CHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCC
QGQIIAYVGSTGVATGPHLHYEVIYNGKHIDPLTIAHKTEVKLPDHELREFKLFVNKINK
CCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
TINRESSSEKEV
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]