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The map label for this gene is yebC [C]

Identifier: 225630084

GI number: 225630084

Start: 274769

End: 275509

Strand: Direct

Name: yebC [C]

Synonym: WRi_002620

Alternate gene names: 225630084

Gene position: 274769-275509 (Clockwise)

Preceding gene: 225630083

Following gene: 225630085

Centisome position: 19.0

GC content: 39.0

Gene sequence:

>741_bases
ATGGCTGGTCATTCACAATTTTCAAATATAAAACATCGGAAAGGCGCTCAGGATGCAAAGCGCTCTCAAAAATTTACGAA
GCTGATTAGAGAAATAACAGTTGCTGCAAAGCAAGGGCTGCCCGATCCCGAACTCAACCCGCGCCTTCGCTCTGCTATAT
TTGCTGCACGCAAGGAAAATCTACCAAAAGATAAAATAGAAACAGCAATAAAAAATGCAACTGGTAACGTTGCTGGAGAA
AATTACGAGGAAATCCAATATGAAGGTCATGGGCCTTCTGGCACTGCACTCATTGTCCATGCCTTGACTAATAACCGCAA
CCGTACTGCTTCTGAGGTACGTTATATATTTTCTCGCAAGGGTGGAAATTTAGGAGAAACAGGAAGCGTTAGTTACCTTT
TCGATCATGTAGGCTTAATCGTCTATAAAGCAGAGGGTGTGAATTTTGACGATTTATTCAGTCATGGAATCGAATTAGAA
GTATTGAATGTTGAGGAAAATGACAAAGAAGGATTACACGTTATAACTTGTGAAATAAAAGATTTTGGTAAAGTACGCGA
TGCCTTTTATGCAAAATTTGGAGAACCAGAACTTGCTCGTCTTTCATGGCAGCCAAAAGATCTGATTGAAATTAGCGATA
AAGAGTTGATTGATAAATTATCTGCATTGGTTGAAGAGCTAGAAGATAACGACGATGTACAGTATGTGGAAGGTAATTTT
ACTTTTGTTGATAAGCTATGA

Upstream 100 bases:

>100_bases
TATTAGCAGAAAACCTGCAAGATGCCAAGCCAGAGGCTTGAAAATTTGCTTTAGCTTTTTCTATGCTTTGATATATAATT
AGGTTTTTAACTATTTGAAT

Downstream 100 bases:

>100_bases
GGCTGGTAATATTTGTATTGCTTTGTATTTTACCAGCATATGCTACTGAAACATCAACAGATCTTGCACAGCCATTCCAG
CATGGAATCAGAAAAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MAGHSQFSNIKHRKGAQDAKRSQKFTKLIREITVAAKQGLPDPELNPRLRSAIFAARKENLPKDKIETAIKNATGNVAGE
NYEEIQYEGHGPSGTALIVHALTNNRNRTASEVRYIFSRKGGNLGETGSVSYLFDHVGLIVYKAEGVNFDDLFSHGIELE
VLNVEENDKEGLHVITCEIKDFGKVRDAFYAKFGEPELARLSWQPKDLIEISDKELIDKLSALVEELEDNDDVQYVEGNF
TFVDKL

Sequences:

>Translated_246_residues
MAGHSQFSNIKHRKGAQDAKRSQKFTKLIREITVAAKQGLPDPELNPRLRSAIFAARKENLPKDKIETAIKNATGNVAGE
NYEEIQYEGHGPSGTALIVHALTNNRNRTASEVRYIFSRKGGNLGETGSVSYLFDHVGLIVYKAEGVNFDDLFSHGIELE
VLNVEENDKEGLHVITCEIKDFGKVRDAFYAKFGEPELARLSWQPKDLIEISDKELIDKLSALVEELEDNDDVQYVEGNF
TFVDKL
>Mature_245_residues
AGHSQFSNIKHRKGAQDAKRSQKFTKLIREITVAAKQGLPDPELNPRLRSAIFAARKENLPKDKIETAIKNATGNVAGEN
YEEIQYEGHGPSGTALIVHALTNNRNRTASEVRYIFSRKGGNLGETGSVSYLFDHVGLIVYKAEGVNFDDLFSHGIELEV
LNVEENDKEGLHVITCEIKDFGKVRDAFYAKFGEPELARLSWQPKDLIEISDKELIDKLSALVEELEDNDDVQYVEGNFT
FVDKL

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=28.7449392712551, Blast_Score=108, Evalue=3e-24,
Organism=Escherichia coli, GI1788171, Length=246, Percent_Identity=43.0894308943089, Blast_Score=186, Evalue=9e-49,
Organism=Escherichia coli, GI1788294, Length=238, Percent_Identity=39.9159663865546, Blast_Score=147, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17556100, Length=248, Percent_Identity=28.6290322580645, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=265, Percent_Identity=29.811320754717, Blast_Score=97, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24583305, Length=143, Percent_Identity=32.8671328671329, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 27566; Mature: 27435

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSQFSNIKHRKGAQDAKRSQKFTKLIREITVAAKQGLPDPELNPRLRSAIFAARKEN
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
LPKDKIETAIKNATGNVAGENYEEIQYEGHGPSGTALIVHALTNNRNRTASEVRYIFSRK
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHC
GGNLGETGSVSYLFDHVGLIVYKAEGVNFDDLFSHGIELEVLNVEENDKEGLHVITCEIK
CCCCCCCCCHHHHHHHHCEEEEEECCCCHHHHHHCCCEEEEEECCCCCCCCEEEEEEECH
DFGKVRDAFYAKFGEPELARLSWQPKDLIEISDKELIDKLSALVEELEDNDDVQYVEGNF
HHHHHHHHHHHHCCCCHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCE
TFVDKL
EEEECC
>Mature Secondary Structure 
AGHSQFSNIKHRKGAQDAKRSQKFTKLIREITVAAKQGLPDPELNPRLRSAIFAARKEN
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
LPKDKIETAIKNATGNVAGENYEEIQYEGHGPSGTALIVHALTNNRNRTASEVRYIFSRK
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHC
GGNLGETGSVSYLFDHVGLIVYKAEGVNFDDLFSHGIELEVLNVEENDKEGLHVITCEIK
CCCCCCCCCHHHHHHHHCEEEEEECCCCHHHHHHCCCEEEEEECCCCCCCCEEEEEEECH
DFGKVRDAFYAKFGEPELARLSWQPKDLIEISDKELIDKLSALVEELEDNDDVQYVEGNF
HHHHHHHHHHHHCCCCHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCE
TFVDKL
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA