| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527439
Identifier: 222527439
GI number: 222527439
Start: 5242048
End: 5243820
Strand: Reverse
Name: 222527439
Synonym: Chy400_4230
Alternate gene names: NA
Gene position: 5243820-5242048 (Counterclockwise)
Preceding gene: 222527440
Following gene: 222527436
Centisome position: 99.52
GC content: 55.16
Gene sequence:
>1773_bases ATGACGAAAATTTCATATTCGGTACGCTGGCTGATCGCCCTTAGCATCCTGCTCATCTGGACAGCAACACCCGTTCGAGC TGCTGGCGTCGTTGGTAATGGTACTCCAGCGAGCTGTACCGAAGCCGCACTACGGGCTGCTGTAGCCGGCGGCGGTCGTA TCACCTTCAACTGTGGCCCTCAACCTGTCACTATTACCCTCTCCAGCCAATTAGAGTTACGTCAGGATACTGAGATCGAC GGCGGTGGCCCTCAACAGGGTGGCCGGGTGACGCTGAGTGGTGGTGGGCGTACCCGGATTATCTGGCTGTACGATGTGAC CCTCACCATTCGTAATCTGACCCTGGTTAATGGGCGAAGTGTGGAAGGTGGCGCGATCCGTTCCGCCGGTCTCAACTCCC GCGTCTTCATTTACAACAGTATTTTCCGTAACAACGATAGCACTGCCGGCACTGATGAAGAGGGCGGTGGAGCAATTTCG ATGCACTTCGGCCAGTTACACATCGAAGATAGTTTGTTCGAGAATAATCGGGGTATTAACGGTGGTGCCATCTATAACCT GCGTTGTCCGATCACCGTGCTGCGCTCGATATTTCGGAATAACGATAGTTCGCACGGCGGTGTGGTAGCGAATTTTGGCT TCGGTGGTGCCATCTACAACGACGGGGCCGGCCCGCGCGATGTTGGTGGACAAATTCTGATTCGGGACAGTATCTTTATC GGCAATAAGGCGCGTAACTTTGGTGGTGCGGTGTATTCATACCTCTACCATCCTGATCGCTCTGAAATTGAACGTAGCTT TTTTGCCGATAATGTGGTGTACCTCAACAGTAATGGCCGGGCCAGTGGTGGTGCTCTGGTTCACCATAATGGCCCATTAA CCCTACGCGACTCAACGTTCGTGAATAACCGCTCTGAAGATATTGGCGGAGCAGTTCTGGTCGCACAATCGACATTCCAT GCGGGCTGGAATACTGCTTTGTTGAGCAATTTGACCGTCGTCGGTAATCGGGCCGATGCGCCGAATGCCGATAAAGGGAA CGGTGGCGGTCTTTACTTCAGTGGTGGTCAGGCAACGGTCGTCAATGTGACTGTGGCGCATAATTACGCTGATCGACTGG GTGGCGGTATCTACAATACCTCTAACAACAGTGCCGATGTTGAGTTGCGAAATGTGATTGTGGGTGCCAATCGTATCGGC AGTTCTCACGACTCGGTGCAATGCTTCGGCACGTTTCGCGGTAGTCGTAATTTGCAGAGTCCGGTTGGCCGGGCCTGTAT TTCCGGGATTACGCAGGCCGATCCGCGAGTTGATACAGCGGTTGCCGCTCACGGCGGCCCGATGCCCACGCTTGCCTTGC AGGCCGGTAGTCCGGCGATCAACGCCGGTGCCAGTTGTCCGCCGACCGATCAACGCGGTGCCCCGCGGGTTGGTGCCTGT GATCTCGGTGCGTTCGAGTATGGCTCGGCTGCCCCATCTGCCAGTCTCGAACCACCGACATTACTTGGTTTGAACAGTAA TGGTGGGCCGCTTGTCCAGCTCTCGTTTACGCCGGTCAATGGTGCTGTGCGCTACGACGTGGAAGCACGACGCTCTGATG GTGTGGTCTGGATGTTGCAGTTACTCAACAACAGTGTGTTGCTCGATCAGGGGCAGTATACGTTACGCCTGCGTGCCTGC AATGAGCTGGTATGTAGTGATTTCAGTAATGGGGTGGGAGTCACCGTGACGCAGTCCCCCATCAAGTCATTCATCCCCCT GGTCGGGCGGTAG
Upstream 100 bases:
>100_bases ATGCATATATAGCCAAAAAGTCATGTAGACCTGCCTGAACATACTGGTTATCTTCAAGATGAACGAAACTTCATCTCACA CCAACGAGGTAGGGTTTACA
Downstream 100 bases:
>100_bases ATCGGCAAAATCAATCACGCGATTGCGTCCGCCGCGCTTGGCTGCATAAAGCGCGGCGTCGGCGCTTTGGATGAGGGTGG TGATGTGATACTCACCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Polymorphic Membrane Protein Chlamydia; Fibronectin Type III Domain Protein; Lipoprotein; Asn/Thr-Rich Large Protein Family Protein; Outer Membrane Adhesin Like Proteiin; Polymorphic Membrane Protein; Ig Domain Family; Extracellular Nuclease; Fibronectin Type III Domain-Containing Protein
Number of amino acids: Translated: 590; Mature: 589
Protein sequence:
>590_residues MTKISYSVRWLIALSILLIWTATPVRAAGVVGNGTPASCTEAALRAAVAGGGRITFNCGPQPVTITLSSQLELRQDTEID GGGPQQGGRVTLSGGGRTRIIWLYDVTLTIRNLTLVNGRSVEGGAIRSAGLNSRVFIYNSIFRNNDSTAGTDEEGGGAIS MHFGQLHIEDSLFENNRGINGGAIYNLRCPITVLRSIFRNNDSSHGGVVANFGFGGAIYNDGAGPRDVGGQILIRDSIFI GNKARNFGGAVYSYLYHPDRSEIERSFFADNVVYLNSNGRASGGALVHHNGPLTLRDSTFVNNRSEDIGGAVLVAQSTFH AGWNTALLSNLTVVGNRADAPNADKGNGGGLYFSGGQATVVNVTVAHNYADRLGGGIYNTSNNSADVELRNVIVGANRIG SSHDSVQCFGTFRGSRNLQSPVGRACISGITQADPRVDTAVAAHGGPMPTLALQAGSPAINAGASCPPTDQRGAPRVGAC DLGAFEYGSAAPSASLEPPTLLGLNSNGGPLVQLSFTPVNGAVRYDVEARRSDGVVWMLQLLNNSVLLDQGQYTLRLRAC NELVCSDFSNGVGVTVTQSPIKSFIPLVGR
Sequences:
>Translated_590_residues MTKISYSVRWLIALSILLIWTATPVRAAGVVGNGTPASCTEAALRAAVAGGGRITFNCGPQPVTITLSSQLELRQDTEID GGGPQQGGRVTLSGGGRTRIIWLYDVTLTIRNLTLVNGRSVEGGAIRSAGLNSRVFIYNSIFRNNDSTAGTDEEGGGAIS MHFGQLHIEDSLFENNRGINGGAIYNLRCPITVLRSIFRNNDSSHGGVVANFGFGGAIYNDGAGPRDVGGQILIRDSIFI GNKARNFGGAVYSYLYHPDRSEIERSFFADNVVYLNSNGRASGGALVHHNGPLTLRDSTFVNNRSEDIGGAVLVAQSTFH AGWNTALLSNLTVVGNRADAPNADKGNGGGLYFSGGQATVVNVTVAHNYADRLGGGIYNTSNNSADVELRNVIVGANRIG SSHDSVQCFGTFRGSRNLQSPVGRACISGITQADPRVDTAVAAHGGPMPTLALQAGSPAINAGASCPPTDQRGAPRVGAC DLGAFEYGSAAPSASLEPPTLLGLNSNGGPLVQLSFTPVNGAVRYDVEARRSDGVVWMLQLLNNSVLLDQGQYTLRLRAC NELVCSDFSNGVGVTVTQSPIKSFIPLVGR >Mature_589_residues TKISYSVRWLIALSILLIWTATPVRAAGVVGNGTPASCTEAALRAAVAGGGRITFNCGPQPVTITLSSQLELRQDTEIDG GGPQQGGRVTLSGGGRTRIIWLYDVTLTIRNLTLVNGRSVEGGAIRSAGLNSRVFIYNSIFRNNDSTAGTDEEGGGAISM HFGQLHIEDSLFENNRGINGGAIYNLRCPITVLRSIFRNNDSSHGGVVANFGFGGAIYNDGAGPRDVGGQILIRDSIFIG NKARNFGGAVYSYLYHPDRSEIERSFFADNVVYLNSNGRASGGALVHHNGPLTLRDSTFVNNRSEDIGGAVLVAQSTFHA GWNTALLSNLTVVGNRADAPNADKGNGGGLYFSGGQATVVNVTVAHNYADRLGGGIYNTSNNSADVELRNVIVGANRIGS SHDSVQCFGTFRGSRNLQSPVGRACISGITQADPRVDTAVAAHGGPMPTLALQAGSPAINAGASCPPTDQRGAPRVGACD LGAFEYGSAAPSASLEPPTLLGLNSNGGPLVQLSFTPVNGAVRYDVEARRSDGVVWMLQLLNNSVLLDQGQYTLRLRACN ELVCSDFSNGVGVTVTQSPIKSFIPLVGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61814; Mature: 61683
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKISYSVRWLIALSILLIWTATPVRAAGVVGNGTPASCTEAALRAAVAGGGRITFNCGP CCEEEHHHHHHHHHHHHHHHCCCCCCEECEECCCCCCHHHHHHHHHHHCCCCEEEEECCC QPVTITLSSQLELRQDTEIDGGGPQQGGRVTLSGGGRTRIIWLYDVTLTIRNLTLVNGRS CCEEEEECCCEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEEEEEEECCCC VEGGAIRSAGLNSRVFIYNSIFRNNDSTAGTDEEGGGAISMHFGQLHIEDSLFENNRGIN CCCCCEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEHHHHHCCCCCC GGAIYNLRCPITVLRSIFRNNDSSHGGVVANFGFGGAIYNDGAGPRDVGGQILIRDSIFI CCEEEEEECHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCEEEEEEEEEE GNKARNFGGAVYSYLYHPDRSEIERSFFADNVVYLNSNGRASGGALVHHNGPLTLRDSTF CCCCCCCCCCEEHEEECCCHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCEEEECCCC VNNRSEDIGGAVLVAQSTFHAGWNTALLSNLTVVGNRADAPNADKGNGGGLYFSGGQATV CCCCCCCCCCEEEEEECCCCCCCCHHHHCCEEEEECCCCCCCCCCCCCCEEEEECCCEEE VNVTVAHNYADRLGGGIYNTSNNSADVELRNVIVGANRIGSSHDSVQCFGTFRGSRNLQS EEEEEECCCHHHHCCCEEECCCCCCCEEEEEEEEECHHCCCCCCCEEEEEEECCCCCCCC PVGRACISGITQADPRVDTAVAAHGGPMPTLALQAGSPAINAGASCPPTDQRGAPRVGAC HHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC DLGAFEYGSAAPSASLEPPTLLGLNSNGGPLVQLSFTPVNGAVRYDVEARRSDGVVWMLQ CCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEE LLNNSVLLDQGQYTLRLRACNELVCSDFSNGVGVTVTQSPIKSFIPLVGR HHCCEEEEECCCEEEEEEHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCC >Mature Secondary Structure TKISYSVRWLIALSILLIWTATPVRAAGVVGNGTPASCTEAALRAAVAGGGRITFNCGP CEEEHHHHHHHHHHHHHHHCCCCCCEECEECCCCCCHHHHHHHHHHHCCCCEEEEECCC QPVTITLSSQLELRQDTEIDGGGPQQGGRVTLSGGGRTRIIWLYDVTLTIRNLTLVNGRS CCEEEEECCCEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEEEEEEECCCC VEGGAIRSAGLNSRVFIYNSIFRNNDSTAGTDEEGGGAISMHFGQLHIEDSLFENNRGIN CCCCCEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEHHHHHCCCCCC GGAIYNLRCPITVLRSIFRNNDSSHGGVVANFGFGGAIYNDGAGPRDVGGQILIRDSIFI CCEEEEEECHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCEEEEEEEEEE GNKARNFGGAVYSYLYHPDRSEIERSFFADNVVYLNSNGRASGGALVHHNGPLTLRDSTF CCCCCCCCCCEEHEEECCCHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCEEEECCCC VNNRSEDIGGAVLVAQSTFHAGWNTALLSNLTVVGNRADAPNADKGNGGGLYFSGGQATV CCCCCCCCCCEEEEEECCCCCCCCHHHHCCEEEEECCCCCCCCCCCCCCEEEEECCCEEE VNVTVAHNYADRLGGGIYNTSNNSADVELRNVIVGANRIGSSHDSVQCFGTFRGSRNLQS EEEEEECCCHHHHCCCEEECCCCCCCEEEEEEEEECHHCCCCCCCEEEEEEECCCCCCCC PVGRACISGITQADPRVDTAVAAHGGPMPTLALQAGSPAINAGASCPPTDQRGAPRVGAC HHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC DLGAFEYGSAAPSASLEPPTLLGLNSNGGPLVQLSFTPVNGAVRYDVEARRSDGVVWMLQ CCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEE LLNNSVLLDQGQYTLRLRACNELVCSDFSNGVGVTVTQSPIKSFIPLVGR HHCCEEEEECCCEEEEEEHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA