| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527436
Identifier: 222527436
GI number: 222527436
Start: 5236729
End: 5238063
Strand: Reverse
Name: 222527436
Synonym: Chy400_4227
Alternate gene names: NA
Gene position: 5238063-5236729 (Counterclockwise)
Preceding gene: 222527439
Following gene: 222527435
Centisome position: 99.41
GC content: 56.55
Gene sequence:
>1335_bases ATGCTTCCAACACCACGCCTCCTCATGCTCGTATTGCTGGCTGTACCGTTGATTGCCGGTGCAGCGTTTGTACCGTATCT GGCCTGGGTCGCAGTCATCTACCTGGTGGTGGTTGGTGGCGTGCTGGTTAGCGATGTCTTGCTCTCACCGCGACCTGACC AGATTGATGTTGAGCGACTACACGAGTCGCGGCTGTCGCTGGGTACGGCCAATCTGGTCACCATTCTGGTAGCCAATACC TCGGCTCGACCATTGCGCTTTGTTGTGCGGGATGAGTATCCGGTCGAGATGCCGGTTGACGTTGATTTGCTGCCGGGAGA AGCCGGGCCGTTTGGTCTCTGTGAGCTGCGTTATCATCTGCGCCCACAACGGCGTGGCGATTATCAGTTTGGTGATATTG TCATGCGTTACGATGGGGTACTCGGCTGTCATCGGCGGCAGGTGCGCTTCCCGGCTAGCCGACCGGTGCAGGTCTACCCA AATCTACTGGAAGCACGCAAATACGATCTGTTGATCCGGCGCGGTCAATTACGCACGATTGGTTTGCGCTCGATCCGGCA ATTGGGGCTGGGGGGCGAATTTGAGCATCTGCGCAACTATACGACCAATGACGAGTATCGCCGGATTAACTGGAAGGCTA CTGCTCGTCGTGCGCAACCAATTGTCGCCGAGATTGAGGCCGAGCGCAGTCAGCATGTCATTGCAGTGATTGATGCCGGG CGATTAATGGCGGCACCGGTGGCCGATCCGTCGCATCCTGACGATCCCGGTCTGACCCGCCTCGACTACGTTGTGAATAC AGCGTTGATGCTCAGTTTTGTTGTCCTTGGCAAAGGTGATTATGCCGGTATGCTCACCTTTGCCGGTCAGGTTGAGAACT TTATCGCACCACGCAAGGGTAAGGCACAGTTCCATCGCCTCCTCGATGCGCTCTACAATGTCCAGCCGCAACTGGTAGAA GCCGATCTGCCGGCAGCCTTAACCTATCTCGATCAACATCAGCAGCGGCGTGCGCTGATTGTTATTTTTACCGATCTCTC GCATCCGGCGGCTGCACAGCCGCTTATCAGCCATCTGCGCCGGCTGTCGCGTCGGCATTTACCGTTGTGTGTGACGATCA GTGATCCTAATATTACTGGCGTTGCCGGCCATCCGGTACAGGATAGCCAGGCCCTGTTTCGCCGGTTAGTCGCAGAACAG TTGGCCGATGAGCGGCGAATGATTCTTGATCAGATTCAGCGTAGTGGTGCGCTGACGCTCGATGTGCCGGCGACGGCCCT GACCGTTTCGGTTGTGAATACCTATTTGCGCCTGAAAGAGGAGGCGCGGTTGTAA
Upstream 100 bases:
>100_bases TCGGTCATGTCGCTATGACTCCTGCAATCGTTCCCTCCGCATGGTGATCCTGGTCGATTATAATAGATCAGGGCAAAGCT GACCATATGAAACAGACTGT
Downstream 100 bases:
>100_bases GAGGTTATTTATCGGCTCGTTGAGCTGATCCTTAGCGGGTCTGGTACTGAGACTGGCATGAAATATCTCATCTTTTTCTT GTTCGCTACCACTACCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MLPTPRLLMLVLLAVPLIAGAAFVPYLAWVAVIYLVVVGGVLVSDVLLSPRPDQIDVERLHESRLSLGTANLVTILVANT SARPLRFVVRDEYPVEMPVDVDLLPGEAGPFGLCELRYHLRPQRRGDYQFGDIVMRYDGVLGCHRRQVRFPASRPVQVYP NLLEARKYDLLIRRGQLRTIGLRSIRQLGLGGEFEHLRNYTTNDEYRRINWKATARRAQPIVAEIEAERSQHVIAVIDAG RLMAAPVADPSHPDDPGLTRLDYVVNTALMLSFVVLGKGDYAGMLTFAGQVENFIAPRKGKAQFHRLLDALYNVQPQLVE ADLPAALTYLDQHQQRRALIVIFTDLSHPAAAQPLISHLRRLSRRHLPLCVTISDPNITGVAGHPVQDSQALFRRLVAEQ LADERRMILDQIQRSGALTLDVPATALTVSVVNTYLRLKEEARL
Sequences:
>Translated_444_residues MLPTPRLLMLVLLAVPLIAGAAFVPYLAWVAVIYLVVVGGVLVSDVLLSPRPDQIDVERLHESRLSLGTANLVTILVANT SARPLRFVVRDEYPVEMPVDVDLLPGEAGPFGLCELRYHLRPQRRGDYQFGDIVMRYDGVLGCHRRQVRFPASRPVQVYP NLLEARKYDLLIRRGQLRTIGLRSIRQLGLGGEFEHLRNYTTNDEYRRINWKATARRAQPIVAEIEAERSQHVIAVIDAG RLMAAPVADPSHPDDPGLTRLDYVVNTALMLSFVVLGKGDYAGMLTFAGQVENFIAPRKGKAQFHRLLDALYNVQPQLVE ADLPAALTYLDQHQQRRALIVIFTDLSHPAAAQPLISHLRRLSRRHLPLCVTISDPNITGVAGHPVQDSQALFRRLVAEQ LADERRMILDQIQRSGALTLDVPATALTVSVVNTYLRLKEEARL >Mature_444_residues MLPTPRLLMLVLLAVPLIAGAAFVPYLAWVAVIYLVVVGGVLVSDVLLSPRPDQIDVERLHESRLSLGTANLVTILVANT SARPLRFVVRDEYPVEMPVDVDLLPGEAGPFGLCELRYHLRPQRRGDYQFGDIVMRYDGVLGCHRRQVRFPASRPVQVYP NLLEARKYDLLIRRGQLRTIGLRSIRQLGLGGEFEHLRNYTTNDEYRRINWKATARRAQPIVAEIEAERSQHVIAVIDAG RLMAAPVADPSHPDDPGLTRLDYVVNTALMLSFVVLGKGDYAGMLTFAGQVENFIAPRKGKAQFHRLLDALYNVQPQLVE ADLPAALTYLDQHQQRRALIVIFTDLSHPAAAQPLISHLRRLSRRHLPLCVTISDPNITGVAGHPVQDSQALFRRLVAEQ LADERRMILDQIQRSGALTLDVPATALTVSVVNTYLRLKEEARL
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49665; Mature: 49665
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTPRLLMLVLLAVPLIAGAAFVPYLAWVAVIYLVVVGGVLVSDVLLSPRPDQIDVERL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH HESRLSLGTANLVTILVANTSARPLRFVVRDEYPVEMPVDVDLLPGEAGPFGLCELRYHL HHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCEEEHHHC RPQRRGDYQFGDIVMRYDGVLGCHRRQVRFPASRPVQVYPNLLEARKYDLLIRRGQLRTI CCCCCCCCCHHHEEEEECCCCCCCCCEEECCCCCCHHHCHHHHHHHHHHHHEECCCCCHH GLRSIRQLGLGGEFEHLRNYTTNDEYRRINWKATARRAQPIVAEIEAERSQHVIAVIDAG HHHHHHHHCCCCCHHHHCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHCCCCCEEEEEECC RLMAAPVADPSHPDDPGLTRLDYVVNTALMLSFVVLGKGDYAGMLTFAGQVENFIAPRKG CEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC KAQFHRLLDALYNVQPQLVEADLPAALTYLDQHQQRRALIVIFTDLSHPAAAQPLISHLR HHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHH RLSRRHLPLCVTISDPNITGVAGHPVQDSQALFRRLVAEQLADERRMILDQIQRSGALTL HHHHCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE DVPATALTVSVVNTYLRLKEEARL ECCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLPTPRLLMLVLLAVPLIAGAAFVPYLAWVAVIYLVVVGGVLVSDVLLSPRPDQIDVERL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH HESRLSLGTANLVTILVANTSARPLRFVVRDEYPVEMPVDVDLLPGEAGPFGLCELRYHL HHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCEEEHHHC RPQRRGDYQFGDIVMRYDGVLGCHRRQVRFPASRPVQVYPNLLEARKYDLLIRRGQLRTI CCCCCCCCCHHHEEEEECCCCCCCCCEEECCCCCCHHHCHHHHHHHHHHHHEECCCCCHH GLRSIRQLGLGGEFEHLRNYTTNDEYRRINWKATARRAQPIVAEIEAERSQHVIAVIDAG HHHHHHHHCCCCCHHHHCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHCCCCCEEEEEECC RLMAAPVADPSHPDDPGLTRLDYVVNTALMLSFVVLGKGDYAGMLTFAGQVENFIAPRKG CEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC KAQFHRLLDALYNVQPQLVEADLPAALTYLDQHQQRRALIVIFTDLSHPAAAQPLISHLR HHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHH RLSRRHLPLCVTISDPNITGVAGHPVQDSQALFRRLVAEQLADERRMILDQIQRSGALTL HHHHCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE DVPATALTVSVVNTYLRLKEEARL ECCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA