| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is ppc [H]
Identifier: 222527411
GI number: 222527411
Start: 5208361
End: 5211093
Strand: Reverse
Name: ppc [H]
Synonym: Chy400_4202
Alternate gene names: 222527411
Gene position: 5211093-5208361 (Counterclockwise)
Preceding gene: 222527412
Following gene: 222527409
Centisome position: 98.9
GC content: 57.48
Gene sequence:
>2733_bases ATGCAACCACTGGATCAGGAGAAGGTCGATCTGGATTTCACCTTCTTACTCGATTGTTTTGCCAGAGTATTGCGTGACGT CGATGCCGGGCCGGTATCGGAAGCATTGCCCTGGTTGGGTTCGCATACTCCTGGTGATCATATTCCAACTCGCGCACTGG CACAGGCACTCATTATTGCCTTTCAATTGCTCAATATCGCCGAGGAAAACGCAGCAGTGCAGCAGCGCCGGGTCGCTGAC CGCGATCCGAATATCCCGCCGGAATTGGGGCGCTGGCGAGATGCCTTGCAGAAGCTGCACCAAAGTGGTTTGACCGGCGA AGAGATTGCTGCGGCGCTTCCCCATGTTCACGTCGAGCCGGTGCTCACAGCGCATCCCACTGAAGCCAAACGGGCAACAG TGCTCGCACATTATCGTGAGCTGTACTTGTTGCTGGTACGGCGCGAGAGTCAGCGCTGGTCGCCAGCAGAACAGGCAGAG ATCACGGCAGATATTGAGACCCTGCTCGAACGATTGTGGCGTACCGGTGATGTCTTTCTGAGCAAGCCGGGTGTTCCTGC CGAAGTGCGCAATGTCCTGCATTACCTGGTCAATGTCTTTCCCGATGTTTTGCCCGTTCTTGATAATCAGTTGCGCTACG CCTGGCAGGAAGCCGGTTTCGATCCTGCGCTGCTGAGCGATACCTGGCCAAAGCTCAGTTTTGGTTCGTGGGTCGGTGGT GATCGCGACGGTCATCCCCTGGTGACTGCCGAAATTACTGCACAAACCCTTCGTGAGATGCGTCTGCAAGCCTTGCGTCT CCTGCGGCGTCGAATTCGACAGGCCGCCAGCCATCTCAGTATTTCTGATCTGCTCGTTCCAACGCCACCGGGGTTGATTG ACCAGATTCGGCGGTTGTCGAGTGGTTTAGGTAGTCGTGGTGCGCAGGCAGTGGCGCGTAACCCCAATGAACCGTGGCGG CAGGCGCTGAACCTGATGCTGGCTCGTCTGCCAATAGACGATGCGCCGGCTGAAGCAGCACGGCTGGTCGACGATCCTGA TCGTTATCGTTGTGCCGATGAACTGCTCAATGATCTGCGCGAGTTTGCCGGGTATTTACGTGCAGTAGGGGCCGGGCGAC TGGCCGATGCCGAGATTCGTCCATTGATGCAACTGGTTGACACCTTTGGCTTTCATCTGGCTACACTTGATGTTCGCCAG AACAGCCAGTTTCATGATCGGGCCCTGGCGCAGTTATTGGAAGCTGCTGGCTTGTCGTCTGACGATCTGATTGGTGGTGA TCCTGAGCGACGGCGGGCACTGTTAGAACGCGAGGTTGCTTCACCACGGCCATTTGCTCACCCCAACACACCGCTTGACT ATGAGGCAGCGGCAGTCGTTGACAGCTATCGTGTTCTTGCCAATCACATTGCTCGCTACGGTACAGCCGGCCTTGGTCCG CTCATCATCAGCATGACACGCGATGTAACTGATGTCCTGGTCGTGTATCTGCTGGCGCGTGAAGCCGGTCTGGCATATGC TACCCCAGAGGGTCTGGTGTGTCGATTGCCGGTCGTTCCATTGTTTGAGACAATCGAAGATCTCGAACATAGCCCCCGCA TTCTGGCTGATATTCTCGACCACCCGGTGACGCGCCGTAGTTTGATCGCCCAGGCTCAGGGTGGGGAGTTAGTGCAGCAG GTGATGATTGGCTATAGCGATAGCAACAAAGACGGCGGCATCCTGGCCAGTCAATGGGCATTGTATCAGGCCCAGCGGGC AATGACAGAAGTGGGACGGGCACGTGGAATACGGATTCGTTTCTTCCATGGCCGTGGTGGCACGATCAGTCGTGGCGCCG GACCCACCAGCCGCTTCATCTCAATGCTGCCACCGGGAAGTTTGAATGGTGATCTTCGTCTTACCGAGCAAGGCGAGGTC ATTTCGCAAAAGTATGCCAATCGCCTTACCGCTGCGTACAACCTGGAACTGCTCATTGCCGGGACAACCAAGCATACATT ACTCCAGCAACGGCAACCCGAAGAGCCGCATCCGCTGGAGCCGGTGATCGGCTGGCTGGCTGAGAAGTCACGTATTGCCT ACCGCGAACTGGTTGAACGCGATGGCTTCATTACCTTCTTCCGTCAGGCCACGCCGATTGATGTCATTGAACAAAGCCGG ATCGGCTCACGTCCATCGCGGCGTACCGGGCAGGCGACGCTGGCCGATCTGCGAGCCATCCCCTGGGTCTTTAGCTGGAA TCAGGCCCGCTTTTATCTGCCGGGCTGGTACGGGGTTGGTAGTGCATTGACGGCCTTGCAAGAACAGGAACCGGCGTTAT GGGAGCAACTGCGTGCAGAGCAGTGGCGGTGGCCGTTATTGCGTTACCTGCTGGCCAATGTTGGGACGAGTTTGCAAACG GCACACCGCGAGACAATGCATGCGTATGCCGGCCTGGTCGAAGATGACGAGATACGGCGACAATTCCTCAACCTGATTGA TGCGGAGTTTACCCGTACAGAAGCGGCATTGACAGCTATTTTCGGTATGCCGATTGAGCAGCGGCGCCCACGGGTTACCG CGACACTGGCCCGGCGCCAAATTGGCCTGGCCCCTCTGCATCGCCGGCAGATAGAGCTGCTGGGTCGGTGGCGTGCCCAG CGGGCGGCTGATGATCCGGCAGCCGAAACCACATTGATCGATCTGCTACTGCTGGTCAACGCGATTGCAGCCGGCCTGCG CACAACCGGATGA
Upstream 100 bases:
>100_bases TCTGCTTAGGGATTTGGGAGATAAGTCTCTCCCGTCTAAACTCTGATATGGTATTATCATTGCTGCCATATGTGTCGTTT GAATGAAAGGTGGCATACGC
Downstream 100 bases:
>100_bases CCGGTGGGTGCAGGTACAGGTTTGATCGAGATGGTAAACCGATAACCACCGGGCAGGTCGGGTAATGATCTGACCTGCCC GGTGGTTATGTTGCCTGTTT
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 910; Mature: 910
Protein sequence:
>910_residues MQPLDQEKVDLDFTFLLDCFARVLRDVDAGPVSEALPWLGSHTPGDHIPTRALAQALIIAFQLLNIAEENAAVQQRRVAD RDPNIPPELGRWRDALQKLHQSGLTGEEIAAALPHVHVEPVLTAHPTEAKRATVLAHYRELYLLLVRRESQRWSPAEQAE ITADIETLLERLWRTGDVFLSKPGVPAEVRNVLHYLVNVFPDVLPVLDNQLRYAWQEAGFDPALLSDTWPKLSFGSWVGG DRDGHPLVTAEITAQTLREMRLQALRLLRRRIRQAASHLSISDLLVPTPPGLIDQIRRLSSGLGSRGAQAVARNPNEPWR QALNLMLARLPIDDAPAEAARLVDDPDRYRCADELLNDLREFAGYLRAVGAGRLADAEIRPLMQLVDTFGFHLATLDVRQ NSQFHDRALAQLLEAAGLSSDDLIGGDPERRRALLEREVASPRPFAHPNTPLDYEAAAVVDSYRVLANHIARYGTAGLGP LIISMTRDVTDVLVVYLLAREAGLAYATPEGLVCRLPVVPLFETIEDLEHSPRILADILDHPVTRRSLIAQAQGGELVQQ VMIGYSDSNKDGGILASQWALYQAQRAMTEVGRARGIRIRFFHGRGGTISRGAGPTSRFISMLPPGSLNGDLRLTEQGEV ISQKYANRLTAAYNLELLIAGTTKHTLLQQRQPEEPHPLEPVIGWLAEKSRIAYRELVERDGFITFFRQATPIDVIEQSR IGSRPSRRTGQATLADLRAIPWVFSWNQARFYLPGWYGVGSALTALQEQEPALWEQLRAEQWRWPLLRYLLANVGTSLQT AHRETMHAYAGLVEDDEIRRQFLNLIDAEFTRTEAALTAIFGMPIEQRRPRVTATLARRQIGLAPLHRRQIELLGRWRAQ RAADDPAAETTLIDLLLLVNAIAAGLRTTG
Sequences:
>Translated_910_residues MQPLDQEKVDLDFTFLLDCFARVLRDVDAGPVSEALPWLGSHTPGDHIPTRALAQALIIAFQLLNIAEENAAVQQRRVAD RDPNIPPELGRWRDALQKLHQSGLTGEEIAAALPHVHVEPVLTAHPTEAKRATVLAHYRELYLLLVRRESQRWSPAEQAE ITADIETLLERLWRTGDVFLSKPGVPAEVRNVLHYLVNVFPDVLPVLDNQLRYAWQEAGFDPALLSDTWPKLSFGSWVGG DRDGHPLVTAEITAQTLREMRLQALRLLRRRIRQAASHLSISDLLVPTPPGLIDQIRRLSSGLGSRGAQAVARNPNEPWR QALNLMLARLPIDDAPAEAARLVDDPDRYRCADELLNDLREFAGYLRAVGAGRLADAEIRPLMQLVDTFGFHLATLDVRQ NSQFHDRALAQLLEAAGLSSDDLIGGDPERRRALLEREVASPRPFAHPNTPLDYEAAAVVDSYRVLANHIARYGTAGLGP LIISMTRDVTDVLVVYLLAREAGLAYATPEGLVCRLPVVPLFETIEDLEHSPRILADILDHPVTRRSLIAQAQGGELVQQ VMIGYSDSNKDGGILASQWALYQAQRAMTEVGRARGIRIRFFHGRGGTISRGAGPTSRFISMLPPGSLNGDLRLTEQGEV ISQKYANRLTAAYNLELLIAGTTKHTLLQQRQPEEPHPLEPVIGWLAEKSRIAYRELVERDGFITFFRQATPIDVIEQSR IGSRPSRRTGQATLADLRAIPWVFSWNQARFYLPGWYGVGSALTALQEQEPALWEQLRAEQWRWPLLRYLLANVGTSLQT AHRETMHAYAGLVEDDEIRRQFLNLIDAEFTRTEAALTAIFGMPIEQRRPRVTATLARRQIGLAPLHRRQIELLGRWRAQ RAADDPAAETTLIDLLLLVNAIAAGLRTTG >Mature_910_residues MQPLDQEKVDLDFTFLLDCFARVLRDVDAGPVSEALPWLGSHTPGDHIPTRALAQALIIAFQLLNIAEENAAVQQRRVAD RDPNIPPELGRWRDALQKLHQSGLTGEEIAAALPHVHVEPVLTAHPTEAKRATVLAHYRELYLLLVRRESQRWSPAEQAE ITADIETLLERLWRTGDVFLSKPGVPAEVRNVLHYLVNVFPDVLPVLDNQLRYAWQEAGFDPALLSDTWPKLSFGSWVGG DRDGHPLVTAEITAQTLREMRLQALRLLRRRIRQAASHLSISDLLVPTPPGLIDQIRRLSSGLGSRGAQAVARNPNEPWR QALNLMLARLPIDDAPAEAARLVDDPDRYRCADELLNDLREFAGYLRAVGAGRLADAEIRPLMQLVDTFGFHLATLDVRQ NSQFHDRALAQLLEAAGLSSDDLIGGDPERRRALLEREVASPRPFAHPNTPLDYEAAAVVDSYRVLANHIARYGTAGLGP LIISMTRDVTDVLVVYLLAREAGLAYATPEGLVCRLPVVPLFETIEDLEHSPRILADILDHPVTRRSLIAQAQGGELVQQ VMIGYSDSNKDGGILASQWALYQAQRAMTEVGRARGIRIRFFHGRGGTISRGAGPTSRFISMLPPGSLNGDLRLTEQGEV ISQKYANRLTAAYNLELLIAGTTKHTLLQQRQPEEPHPLEPVIGWLAEKSRIAYRELVERDGFITFFRQATPIDVIEQSR IGSRPSRRTGQATLADLRAIPWVFSWNQARFYLPGWYGVGSALTALQEQEPALWEQLRAEQWRWPLLRYLLANVGTSLQT AHRETMHAYAGLVEDDEIRRQFLNLIDAEFTRTEAALTAIFGMPIEQRRPRVTATLARRQIGLAPLHRRQIELLGRWRAQ RAADDPAAETTLIDLLLLVNAIAAGLRTTG
Specific function: Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=873, Percent_Identity=30.9278350515464, Blast_Score=284, Evalue=2e-77,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 101602; Mature: 101602
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPLDQEKVDLDFTFLLDCFARVLRDVDAGPVSEALPWLGSHTPGDHIPTRALAQALIIA CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHH FQLLNIAEENAAVQQRRVADRDPNIPPELGRWRDALQKLHQSGLTGEEIAAALPHVHVEP HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECC VLTAHPTEAKRATVLAHYRELYLLLVRRESQRWSPAEQAEITADIETLLERLWRTGDVFL CEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE SKPGVPAEVRNVLHYLVNVFPDVLPVLDNQLRYAWQEAGFDPALLSDTWPKLSFGSWVGG ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCC DRDGHPLVTAEITAQTLREMRLQALRLLRRRIRQAASHLSISDLLVPTPPGLIDQIRRLS CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHH SGLGSRGAQAVARNPNEPWRQALNLMLARLPIDDAPAEAARLVDDPDRYRCADELLNDLR HCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH EFAGYLRAVGAGRLADAEIRPLMQLVDTFGFHLATLDVRQNSQFHDRALAQLLEAAGLSS HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHEEEEEECCCCCHHHHHHHHHHHHCCCCC DDLIGGDPERRRALLEREVASPRPFAHPNTPLDYEAAAVVDSYRVLANHIARYGTAGLGP CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH LIISMTRDVTDVLVVYLLAREAGLAYATPEGLVCRLPVVPLFETIEDLEHSPRILADILD HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHC HPVTRRSLIAQAQGGELVQQVMIGYSDSNKDGGILASQWALYQAQRAMTEVGRARGIRIR CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEE FFHGRGGTISRGAGPTSRFISMLPPGSLNGDLRLTEQGEVISQKYANRLTAAYNLELLIA EEECCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCEEEEEE GTTKHTLLQQRQPEEPHPLEPVIGWLAEKSRIAYRELVERDGFITFFRQATPIDVIEQSR CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHHH IGSRPSRRTGQATLADLRAIPWVFSWNQARFYLPGWYGVGSALTALQEQEPALWEQLRAE CCCCCCCCCCHHHHHHHHHCCCEEECCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHH QWRWPLLRYLLANVGTSLQTAHRETMHAYAGLVEDDEIRRQFLNLIDAEFTRTEAALTAI HCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FGMPIEQRRPRVTATLARRQIGLAPLHRRQIELLGRWRAQRAADDPAAETTLIDLLLLVN HCCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AIAAGLRTTG HHHHHHCCCC >Mature Secondary Structure MQPLDQEKVDLDFTFLLDCFARVLRDVDAGPVSEALPWLGSHTPGDHIPTRALAQALIIA CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHH FQLLNIAEENAAVQQRRVADRDPNIPPELGRWRDALQKLHQSGLTGEEIAAALPHVHVEP HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECC VLTAHPTEAKRATVLAHYRELYLLLVRRESQRWSPAEQAEITADIETLLERLWRTGDVFL CEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE SKPGVPAEVRNVLHYLVNVFPDVLPVLDNQLRYAWQEAGFDPALLSDTWPKLSFGSWVGG ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCC DRDGHPLVTAEITAQTLREMRLQALRLLRRRIRQAASHLSISDLLVPTPPGLIDQIRRLS CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHH SGLGSRGAQAVARNPNEPWRQALNLMLARLPIDDAPAEAARLVDDPDRYRCADELLNDLR HCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH EFAGYLRAVGAGRLADAEIRPLMQLVDTFGFHLATLDVRQNSQFHDRALAQLLEAAGLSS HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHEEEEEECCCCCHHHHHHHHHHHHCCCCC DDLIGGDPERRRALLEREVASPRPFAHPNTPLDYEAAAVVDSYRVLANHIARYGTAGLGP CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH LIISMTRDVTDVLVVYLLAREAGLAYATPEGLVCRLPVVPLFETIEDLEHSPRILADILD HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHC HPVTRRSLIAQAQGGELVQQVMIGYSDSNKDGGILASQWALYQAQRAMTEVGRARGIRIR CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEE FFHGRGGTISRGAGPTSRFISMLPPGSLNGDLRLTEQGEVISQKYANRLTAAYNLELLIA EEECCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCEEEEEE GTTKHTLLQQRQPEEPHPLEPVIGWLAEKSRIAYRELVERDGFITFFRQATPIDVIEQSR CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHHH IGSRPSRRTGQATLADLRAIPWVFSWNQARFYLPGWYGVGSALTALQEQEPALWEQLRAE CCCCCCCCCCHHHHHHHHHCCCEEECCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHH QWRWPLLRYLLANVGTSLQTAHRETMHAYAGLVEDDEIRRQFLNLIDAEFTRTEAALTAI HCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FGMPIEQRRPRVTATLARRQIGLAPLHRRQIELLGRWRAQRAADDPAAETTLIDLLLLVN HCCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AIAAGLRTTG HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9168622; 7961516 [H]