| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527280
Identifier: 222527280
GI number: 222527280
Start: 5024427
End: 5025839
Strand: Direct
Name: 222527280
Synonym: Chy400_4065
Alternate gene names: NA
Gene position: 5024427-5025839 (Clockwise)
Preceding gene: 222527279
Following gene: 222527281
Centisome position: 95.36
GC content: 54.49
Gene sequence:
>1413_bases ATGAATTCGCTCCTGCGTCATATAGATACACCACCCTGGATTGAACGGCTCCCCCGTCCGTTGGTGCTGGGAGGGGTGAT TGGTGTCCTGATCGTCTACAGTCTGGCGGTTGGTTTCATGTTTGGCACCAATCGCCAACTGATCGGCTTTGCACTGCTAG CGCTTCCATTAGGGTTGATCGGGTTAACCCTCTTACTCTACCGGTTTGAGTGGTTTGTGCTGATCCTCCCCCTCACCGGG CTGGCAATGCGTCCGCTCAGCCTGCCGGCAGGCAACGGGAGCGAATTACCGATTAGCATGCTGCTTACCCTGGCCCTCAG TGGAATCTGGATTGTCAGCATGATCACCCGTCGCACGTGGCAACTGGTGCCCTCGCCATTGAATAAGCCACTGCTGGCGA TGATGGCGATCTGTATCTTTTCGATACCGTGGGGAGCACTTTGGGCCGATCCGATCCTGGACTGGTGGATTATGGGCAAT TTCCGCTTTGCCCAAATTGCCTCATTGCTCTCGTTGCTGGGATTGATGTGCATTCCTTTCCTGGTCGGACGGTTCATTCA GCACGAGTGGCAAATTAAAGCCTACCTGGGCATGTTTGTGGTCTGCGGCGGATTGATGACCATCGCTCAGGTGCTGAACA TCAATCACGTGATCCTCACCGATGCCGGGCTATGGGGTTTGTGGTTTGGCGTTACCCTGGCAGGTATCATCTTTCTGCAA CCACAGGTACCCTGGGGATGGCGACTGGCCGGGGGCGCTTTGCTCATCCTGCACATCTGGCTGGTCGCCGTTCGTAATTC GCTCTGGATTTCAGGCTGGCTACCGACCTTCGTCGCTCTGATTCTTATGGCCTTCCTCATCTCAAGACGACTCTTCTTCA TCTTGATCCTGCTGGTCGGGTTAAATCTGGCCTTCGGGCCTGGCCGAAGTTACATCGATAGCGTCATTCATGACAATATC GAAGAGGGTGGCCTGGGACGATTAGAAATCTGGGCACGTAATTTATGGGTTGTGCAAAACCACTGGCTGTTTGGTACCGG CGTGGCCGGCTATGCGCCCTACAACATGACCTACTTCCGCTACGATGCACGTTCAACGCACAATAACTACTTTGATATTC TGGCTCAATTCGGCGTGGTTGGCTTCGGTATCTGGATTTGGTTTGCCATCGTGAGCCTCTATTACGGCTGGAAAACGATC CAGCTTGCCCCGCAGGGCATCTTGCGAACGACGGCGATCATCGCGACCGCAGGCTGGGCTGCCGCACAGTTCTCGATGAT GCTCGGTGACTGGATATTACCGTTTCTCTACAATCAGGGGGTACCCGGCTTCAAATACACGATGTACAGTTGGGTGTTCG TTGGCCTGCTGATCAGCGTGCGCCAACTGATAGAGCGGAGGGCAGAGACATGA
Upstream 100 bases:
>100_bases GGTTGGGAAACATTTTGTGCGCGATGGTGGTCTGCTCTGGGCGGCAATCGGTCGGCGTGTGCAACAACCGGTGCTACCGG AACGGTTTTAGGTAACGGTA
Downstream 100 bases:
>100_bases AGACGCGCTTTGCCCTCACCATCATGGTGTTTGTGCTTCTGATCGGTATTGCTGGTGAGCAAACCGCACGCAGTCAGGGA TTTTGGACAGCGCCAGTCGA
Product: O-antigen polymerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MNSLLRHIDTPPWIERLPRPLVLGGVIGVLIVYSLAVGFMFGTNRQLIGFALLALPLGLIGLTLLLYRFEWFVLILPLTG LAMRPLSLPAGNGSELPISMLLTLALSGIWIVSMITRRTWQLVPSPLNKPLLAMMAICIFSIPWGALWADPILDWWIMGN FRFAQIASLLSLLGLMCIPFLVGRFIQHEWQIKAYLGMFVVCGGLMTIAQVLNINHVILTDAGLWGLWFGVTLAGIIFLQ PQVPWGWRLAGGALLILHIWLVAVRNSLWISGWLPTFVALILMAFLISRRLFFILILLVGLNLAFGPGRSYIDSVIHDNI EEGGLGRLEIWARNLWVVQNHWLFGTGVAGYAPYNMTYFRYDARSTHNNYFDILAQFGVVGFGIWIWFAIVSLYYGWKTI QLAPQGILRTTAIIATAGWAAAQFSMMLGDWILPFLYNQGVPGFKYTMYSWVFVGLLISVRQLIERRAET
Sequences:
>Translated_470_residues MNSLLRHIDTPPWIERLPRPLVLGGVIGVLIVYSLAVGFMFGTNRQLIGFALLALPLGLIGLTLLLYRFEWFVLILPLTG LAMRPLSLPAGNGSELPISMLLTLALSGIWIVSMITRRTWQLVPSPLNKPLLAMMAICIFSIPWGALWADPILDWWIMGN FRFAQIASLLSLLGLMCIPFLVGRFIQHEWQIKAYLGMFVVCGGLMTIAQVLNINHVILTDAGLWGLWFGVTLAGIIFLQ PQVPWGWRLAGGALLILHIWLVAVRNSLWISGWLPTFVALILMAFLISRRLFFILILLVGLNLAFGPGRSYIDSVIHDNI EEGGLGRLEIWARNLWVVQNHWLFGTGVAGYAPYNMTYFRYDARSTHNNYFDILAQFGVVGFGIWIWFAIVSLYYGWKTI QLAPQGILRTTAIIATAGWAAAQFSMMLGDWILPFLYNQGVPGFKYTMYSWVFVGLLISVRQLIERRAET >Mature_470_residues MNSLLRHIDTPPWIERLPRPLVLGGVIGVLIVYSLAVGFMFGTNRQLIGFALLALPLGLIGLTLLLYRFEWFVLILPLTG LAMRPLSLPAGNGSELPISMLLTLALSGIWIVSMITRRTWQLVPSPLNKPLLAMMAICIFSIPWGALWADPILDWWIMGN FRFAQIASLLSLLGLMCIPFLVGRFIQHEWQIKAYLGMFVVCGGLMTIAQVLNINHVILTDAGLWGLWFGVTLAGIIFLQ PQVPWGWRLAGGALLILHIWLVAVRNSLWISGWLPTFVALILMAFLISRRLFFILILLVGLNLAFGPGRSYIDSVIHDNI EEGGLGRLEIWARNLWVVQNHWLFGTGVAGYAPYNMTYFRYDARSTHNNYFDILAQFGVVGFGIWIWFAIVSLYYGWKTI QLAPQGILRTTAIIATAGWAAAQFSMMLGDWILPFLYNQGVPGFKYTMYSWVFVGLLISVRQLIERRAET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52885; Mature: 52885
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLLRHIDTPPWIERLPRPLVLGGVIGVLIVYSLAVGFMFGTNRQLIGFALLALPLGLI CCCHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH GLTLLLYRFEWFVLILPLTGLAMRPLSLPAGNGSELPISMLLTLALSGIWIVSMITRRTW HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLVPSPLNKPLLAMMAICIFSIPWGALWADPILDWWIMGNFRFAQIASLLSLLGLMCIPF HHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LVGRFIQHEWQIKAYLGMFVVCGGLMTIAQVLNINHVILTDAGLWGLWFGVTLAGIIFLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHEEC PQVPWGWRLAGGALLILHIWLVAVRNSLWISGWLPTFVALILMAFLISRRLFFILILLVG CCCCCCEEEHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNLAFGPGRSYIDSVIHDNIEEGGLGRLEIWARNLWVVQNHWLFGTGVAGYAPYNMTYFR CCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCEEEECCCCCCCCCCEEEEE YDARSTHNNYFDILAQFGVVGFGIWIWFAIVSLYYGWKTIQLAPQGILRTTAIIATAGWA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCHH AAQFSMMLGDWILPFLYNQGVPGFKYTMYSWVFVGLLISVRQLIERRAET HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSLLRHIDTPPWIERLPRPLVLGGVIGVLIVYSLAVGFMFGTNRQLIGFALLALPLGLI CCCHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH GLTLLLYRFEWFVLILPLTGLAMRPLSLPAGNGSELPISMLLTLALSGIWIVSMITRRTW HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLVPSPLNKPLLAMMAICIFSIPWGALWADPILDWWIMGNFRFAQIASLLSLLGLMCIPF HHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LVGRFIQHEWQIKAYLGMFVVCGGLMTIAQVLNINHVILTDAGLWGLWFGVTLAGIIFLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHEEC PQVPWGWRLAGGALLILHIWLVAVRNSLWISGWLPTFVALILMAFLISRRLFFILILLVG CCCCCCEEEHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNLAFGPGRSYIDSVIHDNIEEGGLGRLEIWARNLWVVQNHWLFGTGVAGYAPYNMTYFR CCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCEEEECCCCCCCCCCEEEEE YDARSTHNNYFDILAQFGVVGFGIWIWFAIVSLYYGWKTIQLAPQGILRTTAIIATAGWA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCHH AAQFSMMLGDWILPFLYNQGVPGFKYTMYSWVFVGLLISVRQLIERRAET HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA