| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527281
Identifier: 222527281
GI number: 222527281
Start: 5025836
End: 5027491
Strand: Direct
Name: 222527281
Synonym: Chy400_4066
Alternate gene names: NA
Gene position: 5025836-5027491 (Clockwise)
Preceding gene: 222527280
Following gene: 222527282
Centisome position: 95.39
GC content: 58.64
Gene sequence:
>1656_bases ATGAAGACGCGCTTTGCCCTCACCATCATGGTGTTTGTGCTTCTGATCGGTATTGCTGGTGAGCAAACCGCACGCAGTCA GGGATTTTGGACAGCGCCAGTCGAACTCTCGCCATTGCAGTACGGCCAGGTGCCACCAGAGCGGCTTGAGCGGCGATACG GCTGGTCGTGGCTACCAGATATGACCCTCGGCCCAGACGGTAGTGTGCATGTGGTCTGGTACGGAGGTCTCATTGTCGAC CAACGGGAAGGTGGAACCATCGATCTGTTGATGTATCGCCGGCGCAACGCCGATGGCAGTTGGGAACCGGTACGCGAGCT GCTGGCTCCCGGTGTGGGTGGCTACACTGTGCGGGCAAGCATCGTGCTAGGGCGTGATGGGCGGCTCCATCTGCTCTACC GGGCCGGGACGAGTATCAGGTACAGCTCGGCACCGTGGGATACGGCTATTCAGCCGCAAACCTGGGATGAAGGGCGGCTG GTCAGCGATAGTGGCTACTACGTTGCCCTGGCTGCCGATCAAAAGGGTGTACTGCACGCCTTCTGGAGTGATGTGGTAGC CGAAAACACCAACCCGCAATGCTTTCAATGTGGCGAAATCTTCTACCGCCGTTCAACCGACAATGGCGCCACGTGGTCGG CAATTGTCAACCTTTCGCAGAGCGATTTGGGGGAGAACCGGCCCCAGGTACGGGTTGACACGCTCAATCGCATTCATATC GTCTGGGATGAAGGTGCCGACTGGTACGCCGGCCAGGGTCAGCCGCACTACGGTGTCTACCGGCGTTCAGACGATGGCGG TGAGACGTGGACGACGCCGGTCAAATTTCGCTTACCGACAACTGTTGTCCAACTGTTGCGGCAACAACCGGGCAACCGAC AGCAGTCGACCAATGATCTGCCAGGGCCACCGTTGGAAGCGGTACAGCAGACGGCACTGACCGTTGATGCCGCGGGAAAT CCGTTTGTCGTCTTTCGCGGTGTGCGCAACGACCGGCTCTACTTTCAGCGGTCACTCGATGGTGGTGACACCTGGACACC TCCGGTTGAGCTGCCGTATGTACGTGCCCGCAATATCGGTGACAACAACCTCGACTACTACAGTCTGGCAAATGACGGTG CCGGTAATGTCCATCTCTTGATGGTGGGATTTACGGCGGGCACGGAAACCGGTGACAGGCCACCGGCCTTGATCCATATG ACCTTCGACGGCACGCGCTGGCTGCCACCGCGCATCATTATGCAGAACGATCTCTACCCCGAACTGCCACGGTTGGCGAT CTACGAAGGCAACCAGCTTCATGCCGTCTGGTTCACCCGTTCACGGCTGTTTGAAGGTGATCGGCCCGAAGATCGACCGA TCCATCAAATCTGGTACAGCAGCGCTCGCCTGAATCTGCCGCCACGTCCAGGATTACCGCTCTTCACGCCGACGCCACTA CCGCCGACACCCACGGCTGCGGCAGGTGTTGTCGTTGAACCAACGCCAACACCCATCGTTCTGCCAGAGACGATTCGGAA TGCCCCGCCGTTGCAAGAACCGATGAACTGGGAGCGCGGGGGATTGGCGGTCATCGGTATCGCGTTGGCCTTTACAATCA GCATTCTCGGTGCAATTGGCGGATTGATCATCTTTATTCGCAATCGCCGACACTAA
Upstream 100 bases:
>100_bases ACAATCAGGGGGTACCCGGCTTCAAATACACGATGTACAGTTGGGTGTTCGTTGGCCTGCTGATCAGCGTGCGCCAACTG ATAGAGCGGAGGGCAGAGAC
Downstream 100 bases:
>100_bases CCTCAACCAGCAGGCAGGAGCATGATATGGCAATAACGCAAACGACCGAACTGAACGCCATCGAGCAGCGTGCAGCTCAA CGAGTGAACCTCAACACTGC
Product: glycosyl hydrolase BNR repeat-containing protein
Products: NA
Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MKTRFALTIMVFVLLIGIAGEQTARSQGFWTAPVELSPLQYGQVPPERLERRYGWSWLPDMTLGPDGSVHVVWYGGLIVD QREGGTIDLLMYRRRNADGSWEPVRELLAPGVGGYTVRASIVLGRDGRLHLLYRAGTSIRYSSAPWDTAIQPQTWDEGRL VSDSGYYVALAADQKGVLHAFWSDVVAENTNPQCFQCGEIFYRRSTDNGATWSAIVNLSQSDLGENRPQVRVDTLNRIHI VWDEGADWYAGQGQPHYGVYRRSDDGGETWTTPVKFRLPTTVVQLLRQQPGNRQQSTNDLPGPPLEAVQQTALTVDAAGN PFVVFRGVRNDRLYFQRSLDGGDTWTPPVELPYVRARNIGDNNLDYYSLANDGAGNVHLLMVGFTAGTETGDRPPALIHM TFDGTRWLPPRIIMQNDLYPELPRLAIYEGNQLHAVWFTRSRLFEGDRPEDRPIHQIWYSSARLNLPPRPGLPLFTPTPL PPTPTAAAGVVVEPTPTPIVLPETIRNAPPLQEPMNWERGGLAVIGIALAFTISILGAIGGLIIFIRNRRH
Sequences:
>Translated_551_residues MKTRFALTIMVFVLLIGIAGEQTARSQGFWTAPVELSPLQYGQVPPERLERRYGWSWLPDMTLGPDGSVHVVWYGGLIVD QREGGTIDLLMYRRRNADGSWEPVRELLAPGVGGYTVRASIVLGRDGRLHLLYRAGTSIRYSSAPWDTAIQPQTWDEGRL VSDSGYYVALAADQKGVLHAFWSDVVAENTNPQCFQCGEIFYRRSTDNGATWSAIVNLSQSDLGENRPQVRVDTLNRIHI VWDEGADWYAGQGQPHYGVYRRSDDGGETWTTPVKFRLPTTVVQLLRQQPGNRQQSTNDLPGPPLEAVQQTALTVDAAGN PFVVFRGVRNDRLYFQRSLDGGDTWTPPVELPYVRARNIGDNNLDYYSLANDGAGNVHLLMVGFTAGTETGDRPPALIHM TFDGTRWLPPRIIMQNDLYPELPRLAIYEGNQLHAVWFTRSRLFEGDRPEDRPIHQIWYSSARLNLPPRPGLPLFTPTPL PPTPTAAAGVVVEPTPTPIVLPETIRNAPPLQEPMNWERGGLAVIGIALAFTISILGAIGGLIIFIRNRRH >Mature_551_residues MKTRFALTIMVFVLLIGIAGEQTARSQGFWTAPVELSPLQYGQVPPERLERRYGWSWLPDMTLGPDGSVHVVWYGGLIVD QREGGTIDLLMYRRRNADGSWEPVRELLAPGVGGYTVRASIVLGRDGRLHLLYRAGTSIRYSSAPWDTAIQPQTWDEGRL VSDSGYYVALAADQKGVLHAFWSDVVAENTNPQCFQCGEIFYRRSTDNGATWSAIVNLSQSDLGENRPQVRVDTLNRIHI VWDEGADWYAGQGQPHYGVYRRSDDGGETWTTPVKFRLPTTVVQLLRQQPGNRQQSTNDLPGPPLEAVQQTALTVDAAGN PFVVFRGVRNDRLYFQRSLDGGDTWTPPVELPYVRARNIGDNNLDYYSLANDGAGNVHLLMVGFTAGTETGDRPPALIHM TFDGTRWLPPRIIMQNDLYPELPRLAIYEGNQLHAVWFTRSRLFEGDRPEDRPIHQIWYSSARLNLPPRPGLPLFTPTPL PPTPTAAAGVVVEPTPTPIVLPETIRNAPPLQEPMNWERGGLAVIGIALAFTISILGAIGGLIIFIRNRRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61460; Mature: 61460
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS01159 WW_DOMAIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRFALTIMVFVLLIGIAGEQTARSQGFWTAPVELSPLQYGQVPPERLERRYGWSWLPD CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEECCCCCCCCCHHHHHHHCCCCCCCC MTLGPDGSVHVVWYGGLIVDQREGGTIDLLMYRRRNADGSWEPVRELLAPGVGGYTVRAS CCCCCCCCEEEEEECCEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEE IVLGRDGRLHLLYRAGTSIRYSSAPWDTAIQPQTWDEGRLVSDSGYYVALAADQKGVLHA EEEECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCHHHH FWSDVVAENTNPQCFQCGEIFYRRSTDNGATWSAIVNLSQSDLGENRPQVRVDTLNRIHI HHHHHHHCCCCCCEEECCEEEEEECCCCCCEEEEEEECCHHHCCCCCCEEEEECCEEEEE VWDEGADWYAGQGQPHYGVYRRSDDGGETWTTPVKFRLPTTVVQLLRQQPGNRQQSTNDL EEECCCCCCCCCCCCCCCEEEECCCCCCEECCCEEEECCHHHHHHHHHCCCCCCCCCCCC PGPPLEAVQQTALTVDAAGNPFVVFRGVRNDRLYFQRSLDGGDTWTPPVELPYVRARNIG CCCCHHHHHHHEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCC DNNLDYYSLANDGAGNVHLLMVGFTAGTETGDRPPALIHMTFDGTRWLPPRIIMQNDLYP CCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCC ELPRLAIYEGNQLHAVWFTRSRLFEGDRPEDRPIHQIWYSSARLNLPPRPGLPLFTPTPL CCCCEEEEECCEEEEEEEEHHHHCCCCCCCCCCHHHHHCCCCEECCCCCCCCCCCCCCCC PPTPTAAAGVVVEPTPTPIVLPETIRNAPPLQEPMNWERGGLAVIGIALAFTISILGAIG CCCCCCCCCEEECCCCCCEECHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHC GLIIFIRNRRH EEEEEEECCCC >Mature Secondary Structure MKTRFALTIMVFVLLIGIAGEQTARSQGFWTAPVELSPLQYGQVPPERLERRYGWSWLPD CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEECCCCCCCCCHHHHHHHCCCCCCCC MTLGPDGSVHVVWYGGLIVDQREGGTIDLLMYRRRNADGSWEPVRELLAPGVGGYTVRAS CCCCCCCCEEEEEECCEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEE IVLGRDGRLHLLYRAGTSIRYSSAPWDTAIQPQTWDEGRLVSDSGYYVALAADQKGVLHA EEEECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCHHHH FWSDVVAENTNPQCFQCGEIFYRRSTDNGATWSAIVNLSQSDLGENRPQVRVDTLNRIHI HHHHHHHCCCCCCEEECCEEEEEECCCCCCEEEEEEECCHHHCCCCCCEEEEECCEEEEE VWDEGADWYAGQGQPHYGVYRRSDDGGETWTTPVKFRLPTTVVQLLRQQPGNRQQSTNDL EEECCCCCCCCCCCCCCCEEEECCCCCCEECCCEEEECCHHHHHHHHHCCCCCCCCCCCC PGPPLEAVQQTALTVDAAGNPFVVFRGVRNDRLYFQRSLDGGDTWTPPVELPYVRARNIG CCCCHHHHHHHEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCC DNNLDYYSLANDGAGNVHLLMVGFTAGTETGDRPPALIHMTFDGTRWLPPRIIMQNDLYP CCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCC ELPRLAIYEGNQLHAVWFTRSRLFEGDRPEDRPIHQIWYSSARLNLPPRPGLPLFTPTPL CCCCEEEEECCEEEEEEEEHHHHCCCCCCCCCCHHHHHCCCCEECCCCCCCCCCCCCCCC PPTPTAAAGVVVEPTPTPIVLPETIRNAPPLQEPMNWERGGLAVIGIALAFTISILGAIG CCCCCCCCCEEECCCCCCEECHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHC GLIIFIRNRRH EEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA