| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527247
Identifier: 222527247
GI number: 222527247
Start: 4981681
End: 4982466
Strand: Reverse
Name: 222527247
Synonym: Chy400_4031
Alternate gene names: NA
Gene position: 4982466-4981681 (Counterclockwise)
Preceding gene: 222527248
Following gene: 222527246
Centisome position: 94.56
GC content: 59.03
Gene sequence:
>786_bases ATGCAACAGCGGCTGTGGTGGTTTACCGGTCTGATCGGAATCATCGGGGTGCTGGCCTGGCACCAGCGTCCTGACGGGAA TTTGCACGTGATCTTGCTGCCAACCGCCGGCGATGCAATCCTCATTCAATCGCCCGGCGGTTCGTTTACGCTCATTGATG GTGGCCGTGACCCAATAGGGTTGGCGGTTGAGCTGGGGAAATATCTCCCCTTCTGGCAGCGTCGACTTGCGGCTGTGGTG TTAACCCGGATCGACGATCAGCGTGTGCCTGGGCAGTTAGGCGCATTACGTCGCTATCAACCGACGCTGGCGCTGGCACC GGCAGACGTTGGCGGTGAATGGCGTGCGGTATTGCACGATCTGGCAGTCCCCATTCGCCATTTACAGCCCGGCCAACAGC TTGATCTCGGTGGTACCCGGCTGCGGGTACTGGCCGTCCACGAGGGGGAAGAGGGTGGGGCTGTGCTTGCTCTTGAGTAT CGTGCGATCCGTGTTCTCATCCATACCGGTGGTAGCAGTGGTGATGCGGCCCTCGCTACCCTGGCCGGTCAACCAATCGA TCTGTTGATTTATCCCTGGCAGCGCCCTATCGACAACCCGCTGCTTGATCAACTCCGTGTGCAGGCGGTAGCCTTCAGTA CCGGTTTTCAAGCCGCTGAACCGGCGCTCCACACGCTGTACGAACGCCGACAACTGGCACCGCAGGTATACCATCCCAAA CTCGATGGCGCAATCCGCCTGATCAGTGATGGTCGTGCAATCAAGATCACAACACAATTGCCATGA
Upstream 100 bases:
>100_bases GATCGAAGTTATTGCATTAGCCTGAAATCCACTGCAACGTTTGCCGCTGTTGTCCGGTTTACTATACAGAGCACACACGT ATAGTGAACCAGAGAATAAT
Downstream 100 bases:
>100_bases ATATTGATCGTTTGACTCTGGTCTTGTTACTTATCGGTGCCGGCCTGCTCATCCTCGGTGCAGGTGCCATACTCTGGCGG CGTTTGTATCGCGACGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MQQRLWWFTGLIGIIGVLAWHQRPDGNLHVILLPTAGDAILIQSPGGSFTLIDGGRDPIGLAVELGKYLPFWQRRLAAVV LTRIDDQRVPGQLGALRRYQPTLALAPADVGGEWRAVLHDLAVPIRHLQPGQQLDLGGTRLRVLAVHEGEEGGAVLALEY RAIRVLIHTGGSSGDAALATLAGQPIDLLIYPWQRPIDNPLLDQLRVQAVAFSTGFQAAEPALHTLYERRQLAPQVYHPK LDGAIRLISDGRAIKITTQLP
Sequences:
>Translated_261_residues MQQRLWWFTGLIGIIGVLAWHQRPDGNLHVILLPTAGDAILIQSPGGSFTLIDGGRDPIGLAVELGKYLPFWQRRLAAVV LTRIDDQRVPGQLGALRRYQPTLALAPADVGGEWRAVLHDLAVPIRHLQPGQQLDLGGTRLRVLAVHEGEEGGAVLALEY RAIRVLIHTGGSSGDAALATLAGQPIDLLIYPWQRPIDNPLLDQLRVQAVAFSTGFQAAEPALHTLYERRQLAPQVYHPK LDGAIRLISDGRAIKITTQLP >Mature_261_residues MQQRLWWFTGLIGIIGVLAWHQRPDGNLHVILLPTAGDAILIQSPGGSFTLIDGGRDPIGLAVELGKYLPFWQRRLAAVV LTRIDDQRVPGQLGALRRYQPTLALAPADVGGEWRAVLHDLAVPIRHLQPGQQLDLGGTRLRVLAVHEGEEGGAVLALEY RAIRVLIHTGGSSGDAALATLAGQPIDLLIYPWQRPIDNPLLDQLRVQAVAFSTGFQAAEPALHTLYERRQLAPQVYHPK LDGAIRLISDGRAIKITTQLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28499; Mature: 28499
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQRLWWFTGLIGIIGVLAWHQRPDGNLHVILLPTAGDAILIQSPGGSFTLIDGGRDPIG CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCEE LAVELGKYLPFWQRRLAAVVLTRIDDQRVPGQLGALRRYQPTLALAPADVGGEWRAVLHD HEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHH LAVPIRHLQPGQQLDLGGTRLRVLAVHEGEEGGAVLALEYRAIRVLIHTGGSSGDAALAT HHHHHHHCCCCCEECCCCCEEEEEEEEECCCCCEEEEEEEEEEEEEEEECCCCCCEEEEE LAGQPIDLLIYPWQRPIDNPLLDQLRVQAVAFSTGFQAAEPALHTLYERRQLAPQVYHPK CCCCCEEEEEECCCCCCCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCHHCCCC LDGAIRLISDGRAIKITTQLP CCCEEEEEECCCEEEEEECCC >Mature Secondary Structure MQQRLWWFTGLIGIIGVLAWHQRPDGNLHVILLPTAGDAILIQSPGGSFTLIDGGRDPIG CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCEE LAVELGKYLPFWQRRLAAVVLTRIDDQRVPGQLGALRRYQPTLALAPADVGGEWRAVLHD HEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHH LAVPIRHLQPGQQLDLGGTRLRVLAVHEGEEGGAVLALEYRAIRVLIHTGGSSGDAALAT HHHHHHHCCCCCEECCCCCEEEEEEEEECCCCCEEEEEEEEEEEEEEEECCCCCCEEEEE LAGQPIDLLIYPWQRPIDNPLLDQLRVQAVAFSTGFQAAEPALHTLYERRQLAPQVYHPK CCCCCEEEEEECCCCCCCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCHHCCCC LDGAIRLISDGRAIKITTQLP CCCEEEEEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA