| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222527155
Identifier: 222527155
GI number: 222527155
Start: 4886382
End: 4888583
Strand: Reverse
Name: 222527155
Synonym: Chy400_3937
Alternate gene names: NA
Gene position: 4888583-4886382 (Counterclockwise)
Preceding gene: 222527156
Following gene: 222527154
Centisome position: 92.78
GC content: 59.22
Gene sequence:
>2202_bases GTGGCTGCACACGTGCAATCTGTGATCTCGAAATATCTGCCTGCGCTCGGTTGGGCTGTTTTCGCCGCGTGTGTGATCAC GCTCTTCACACAGGTGCCGCTGCGGCGCGAGTTTGATATTGGCCGTAACGATGCCGGGATCGTTCAAGGATTTTCCGATC CCGAACCGATTCCGGCTACGGCGCAAGCTGACGCTGGTGTTGGCCGACGGGTATTGCCGGCAGCCGCTTTACGCATTCCC CAGGCTGGCGCACCGGCCACAGTGACAATGCGCTGGCTGGCGCCAGCCGGAATGCCGGTTGTTATCGCGATCAATGATCA GCCACCTATCCAACTGATTGCGCAGGGCCAGTGGGAAGAGCACGATATTACGGTGAGTAGTGGCTGGCGTAAAGCCATTG ATCTGGTGGTACAGATAACGGCTCCAGAGTCACCGGAACAGATTGTCCTCGACCGGGTTGTTGTCACCGTGACCCCACCG GTATGGCCATATCCGGCCCAGGTGGGCTACGCGCTGATGGTTGGCGCACTGTGTGGGCTGCTGCTGCAAGGTCGTCCACG CTGGCAACCGGCGCTTGCCGTTAGTGTGTATGGGCTGGTCTGGTGGTTGTTCTACCGCAGTAGCCCCTATCCGCTGCTCT ACTTGCCGCCAATCGTGGTAGCGGGACTGCTGACAATCTGGTTAATCTGGCGCTGGCCGAGTCTCGTTGTGCGCTGGCCG CGATGGGCGACGCCGGGACTGGCAGGTGTGATGATAATCCTCTGGATGGGTGCATTACTTCCGGCAATGGTTGCCCACGT AACCCTGGCCCGCCCCGGTGTTGAGAACGATTTTCGCGTCTTTGCTACCCGTGATACGCTGGAAACTATCTTTCAGGCCG ATGGTTTCTACAATCTCGGCTATCCGCTGCTGCTCTGGCTGGTACGACCGCTGACGCACGACAACCCCTTTCTGGCTGCG CGCCTGATTTCGCTGCTGGCAGGTGGTGTCTTGATTGCCGGAGGCTATCTGTTGGCCCGCAGTCTGCTCTCACCTGGATT AGCATTCCTGGCAGCCGGGTGTCTGGCATTGAGCGGCATAGTCGTGCAGTATGGTTTGCTGGTCGGGAGCGATATGCCGT TTGCGGCGCTGATGACACTGGCCGTAGCCGTGACATTACATGTTCATAGACGTTCTCACGCACTGCTGGCGCTGATTGGT GGTGTCTTTGCCGGCACAGCGTTTCTGGTGCGTCATCCCGGCTTGCTGTTGCTGCCCTGGGGCGCTGTAACCCTCTGGTA CATTGCCGGTCGCCGTCCGGCACTGCTCTTCGGATTGGGGTTTGTGCTGGCTGCCGCCCCCCAATTGGTGGTGAATACCC TGCAAACCGGGCAGCTCCTGTTCAATCAGCAGGCTAAAAATATCTGGCTGGCAGTGTACGCCAATACCGATTGGGGACGT TGGGATGAGGTTCCCAACAGCATCGGTCTGTTTGAGGTAATTGGCCGTGATCCGCTGCGTTTTTTGACCAACTGGAGTCG GAATGTGGTTGGTTTCATCGGGGCCGGTGCCGAAGATGTGAGTGAATTCGGGCGCGCCGATCAATTACGCTTACTCGGCT GGCCGGCGAACTGGCTGGCAATTGGGGGATTGGTTGCAGCAGGCTGGCTGGCATGGCAGCATCGGGCCGACCGGCGCTGG CTGACGTTGCTTGCGTTGATTGCCCTGTACGTGGCTGCTATCGCGACTGCGTTCATCTTGCCCCGTTTCTTTCTCCCGCT CACACCGCTGTACGCAGTAGCCGCAGCGTGGGCCATAGCACAACTGTGGACAGATCAGCGACACCTGGTGGCGGCTGCCT TGATCATGGTCGTTTTACTCAGTCCGGGGCCAATGACGGCAACGCAGGCGGTACTGGCAGCACAACCGGCAGACGAAGTG GCAGCAGTGACGTTGGTGCAGCGCTCGTTACCGGCGGATGGCTCGCGACTGGTAGCCGCTATTCCTGATCGCTTGCCGTT GGCAAAATATTCCGCGATAGCGCACCTCGTTCACGTGCGCGTATCACCAACCGTCACCGCGACCGAATTACAGGCGCTGG ACGCCGACTATCTCCTTTGGGATAATGCCCAAGGGCCACCTCCAATCCCCGAACCTGAGCGCAGGCGAATCGGTGATGGC CGTTTTACCCTCTACAGCCTGACAGCGCCAGCTACAAAGTGA
Upstream 100 bases:
>100_bases AATCGCGCGCTGGTTTCGCCGCCGCCAACTGAAGTGCCGATCCAGGAACCGTTACCGCTTCCTGCACCAACAGCGACGCC GTAGGGCGTTTCAGGCGATT
Downstream 100 bases:
>100_bases TAACTGTCTATTGCCTATCTTCTCTCACCCACCTATTTCCTATCTTCTCTCGCCTCCTATTTCCTATCTTCTCTCGCCTA TCTTCTCATCAGCCCCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 733; Mature: 732
Protein sequence:
>733_residues MAAHVQSVISKYLPALGWAVFAACVITLFTQVPLRREFDIGRNDAGIVQGFSDPEPIPATAQADAGVGRRVLPAAALRIP QAGAPATVTMRWLAPAGMPVVIAINDQPPIQLIAQGQWEEHDITVSSGWRKAIDLVVQITAPESPEQIVLDRVVVTVTPP VWPYPAQVGYALMVGALCGLLLQGRPRWQPALAVSVYGLVWWLFYRSSPYPLLYLPPIVVAGLLTIWLIWRWPSLVVRWP RWATPGLAGVMIILWMGALLPAMVAHVTLARPGVENDFRVFATRDTLETIFQADGFYNLGYPLLLWLVRPLTHDNPFLAA RLISLLAGGVLIAGGYLLARSLLSPGLAFLAAGCLALSGIVVQYGLLVGSDMPFAALMTLAVAVTLHVHRRSHALLALIG GVFAGTAFLVRHPGLLLLPWGAVTLWYIAGRRPALLFGLGFVLAAAPQLVVNTLQTGQLLFNQQAKNIWLAVYANTDWGR WDEVPNSIGLFEVIGRDPLRFLTNWSRNVVGFIGAGAEDVSEFGRADQLRLLGWPANWLAIGGLVAAGWLAWQHRADRRW LTLLALIALYVAAIATAFILPRFFLPLTPLYAVAAAWAIAQLWTDQRHLVAAALIMVVLLSPGPMTATQAVLAAQPADEV AAVTLVQRSLPADGSRLVAAIPDRLPLAKYSAIAHLVHVRVSPTVTATELQALDADYLLWDNAQGPPPIPEPERRRIGDG RFTLYSLTAPATK
Sequences:
>Translated_733_residues MAAHVQSVISKYLPALGWAVFAACVITLFTQVPLRREFDIGRNDAGIVQGFSDPEPIPATAQADAGVGRRVLPAAALRIP QAGAPATVTMRWLAPAGMPVVIAINDQPPIQLIAQGQWEEHDITVSSGWRKAIDLVVQITAPESPEQIVLDRVVVTVTPP VWPYPAQVGYALMVGALCGLLLQGRPRWQPALAVSVYGLVWWLFYRSSPYPLLYLPPIVVAGLLTIWLIWRWPSLVVRWP RWATPGLAGVMIILWMGALLPAMVAHVTLARPGVENDFRVFATRDTLETIFQADGFYNLGYPLLLWLVRPLTHDNPFLAA RLISLLAGGVLIAGGYLLARSLLSPGLAFLAAGCLALSGIVVQYGLLVGSDMPFAALMTLAVAVTLHVHRRSHALLALIG GVFAGTAFLVRHPGLLLLPWGAVTLWYIAGRRPALLFGLGFVLAAAPQLVVNTLQTGQLLFNQQAKNIWLAVYANTDWGR WDEVPNSIGLFEVIGRDPLRFLTNWSRNVVGFIGAGAEDVSEFGRADQLRLLGWPANWLAIGGLVAAGWLAWQHRADRRW LTLLALIALYVAAIATAFILPRFFLPLTPLYAVAAAWAIAQLWTDQRHLVAAALIMVVLLSPGPMTATQAVLAAQPADEV AAVTLVQRSLPADGSRLVAAIPDRLPLAKYSAIAHLVHVRVSPTVTATELQALDADYLLWDNAQGPPPIPEPERRRIGDG RFTLYSLTAPATK >Mature_732_residues AAHVQSVISKYLPALGWAVFAACVITLFTQVPLRREFDIGRNDAGIVQGFSDPEPIPATAQADAGVGRRVLPAAALRIPQ AGAPATVTMRWLAPAGMPVVIAINDQPPIQLIAQGQWEEHDITVSSGWRKAIDLVVQITAPESPEQIVLDRVVVTVTPPV WPYPAQVGYALMVGALCGLLLQGRPRWQPALAVSVYGLVWWLFYRSSPYPLLYLPPIVVAGLLTIWLIWRWPSLVVRWPR WATPGLAGVMIILWMGALLPAMVAHVTLARPGVENDFRVFATRDTLETIFQADGFYNLGYPLLLWLVRPLTHDNPFLAAR LISLLAGGVLIAGGYLLARSLLSPGLAFLAAGCLALSGIVVQYGLLVGSDMPFAALMTLAVAVTLHVHRRSHALLALIGG VFAGTAFLVRHPGLLLLPWGAVTLWYIAGRRPALLFGLGFVLAAAPQLVVNTLQTGQLLFNQQAKNIWLAVYANTDWGRW DEVPNSIGLFEVIGRDPLRFLTNWSRNVVGFIGAGAEDVSEFGRADQLRLLGWPANWLAIGGLVAAGWLAWQHRADRRWL TLLALIALYVAAIATAFILPRFFLPLTPLYAVAAAWAIAQLWTDQRHLVAAALIMVVLLSPGPMTATQAVLAAQPADEVA AVTLVQRSLPADGSRLVAAIPDRLPLAKYSAIAHLVHVRVSPTVTATELQALDADYLLWDNAQGPPPIPEPERRRIGDGR FTLYSLTAPATK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79488; Mature: 79357
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAHVQSVISKYLPALGWAVFAACVITLFTQVPLRREFDIGRNDAGIVQGFSDPEPIPAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AQADAGVGRRVLPAAALRIPQAGAPATVTMRWLAPAGMPVVIAINDQPPIQLIAQGQWEE CCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCC HDITVSSGWRKAIDLVVQITAPESPEQIVLDRVVVTVTPPVWPYPAQVGYALMVGALCGL CCEEECCCHHHEEEEEEEEECCCCCHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHH LLQGRPRWQPALAVSVYGLVWWLFYRSSPYPLLYLPPIVVAGLLTIWLIWRWPSLVVRWP HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCHHHHEECC RWATPGLAGVMIILWMGALLPAMVAHVTLARPGVENDFRVFATRDTLETIFQADGFYNLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCC YPLLLWLVRPLTHDNPFLAARLISLLAGGVLIAGGYLLARSLLSPGLAFLAAGCLALSGI HHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VVQYGLLVGSDMPFAALMTLAVAVTLHVHRRSHALLALIGGVFAGTAFLVRHPGLLLLPW HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC GAVTLWYIAGRRPALLFGLGFVLAAAPQLVVNTLQTGQLLFNQQAKNIWLAVYANTDWGR HHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC WDEVPNSIGLFEVIGRDPLRFLTNWSRNVVGFIGAGAEDVSEFGRADQLRLLGWPANWLA HHCCCCCCCHHHHHCCCHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCEEEEECCHHHHH IGGLVAAGWLAWQHRADRRWLTLLALIALYVAAIATAFILPRFFLPLTPLYAVAAAWAIA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLWTDQRHLVAAALIMVVLLSPGPMTATQAVLAAQPADEVAAVTLVQRSLPADGSRLVAA HHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEE IPDRLPLAKYSAIAHLVHVRVSPTVTATELQALDADYLLWDNAQGPPPIPEPERRRIGDG CCCCCCHHHHHHHHHHHEEEECCCEEHHHHHHCCCCEEEECCCCCCCCCCCHHHHCCCCC RFTLYSLTAPATK CEEEEEECCCCCC >Mature Secondary Structure AAHVQSVISKYLPALGWAVFAACVITLFTQVPLRREFDIGRNDAGIVQGFSDPEPIPAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AQADAGVGRRVLPAAALRIPQAGAPATVTMRWLAPAGMPVVIAINDQPPIQLIAQGQWEE CCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCC HDITVSSGWRKAIDLVVQITAPESPEQIVLDRVVVTVTPPVWPYPAQVGYALMVGALCGL CCEEECCCHHHEEEEEEEEECCCCCHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHH LLQGRPRWQPALAVSVYGLVWWLFYRSSPYPLLYLPPIVVAGLLTIWLIWRWPSLVVRWP HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCHHHHEECC RWATPGLAGVMIILWMGALLPAMVAHVTLARPGVENDFRVFATRDTLETIFQADGFYNLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCC YPLLLWLVRPLTHDNPFLAARLISLLAGGVLIAGGYLLARSLLSPGLAFLAAGCLALSGI HHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VVQYGLLVGSDMPFAALMTLAVAVTLHVHRRSHALLALIGGVFAGTAFLVRHPGLLLLPW HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC GAVTLWYIAGRRPALLFGLGFVLAAAPQLVVNTLQTGQLLFNQQAKNIWLAVYANTDWGR HHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC WDEVPNSIGLFEVIGRDPLRFLTNWSRNVVGFIGAGAEDVSEFGRADQLRLLGWPANWLA HHCCCCCCCHHHHHCCCHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCEEEEECCHHHHH IGGLVAAGWLAWQHRADRRWLTLLALIALYVAAIATAFILPRFFLPLTPLYAVAAAWAIA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLWTDQRHLVAAALIMVVLLSPGPMTATQAVLAAQPADEVAAVTLVQRSLPADGSRLVAA HHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEE IPDRLPLAKYSAIAHLVHVRVSPTVTATELQALDADYLLWDNAQGPPPIPEPERRRIGDG CCCCCCHHHHHHHHHHHEEEECCCEEHHHHHHCCCCEEEECCCCCCCCCCCHHHHCCCCC RFTLYSLTAPATK CEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA