| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527156
Identifier: 222527156
GI number: 222527156
Start: 4888600
End: 4889649
Strand: Reverse
Name: 222527156
Synonym: Chy400_3938
Alternate gene names: NA
Gene position: 4889649-4888600 (Counterclockwise)
Preceding gene: 222527157
Following gene: 222527155
Centisome position: 92.8
GC content: 60.86
Gene sequence:
>1050_bases ATGACGACAGAACCACAATCAAATCAGTCGCCGCCTGAACCACCACCGGCACCTCGCCCAACCCGTCGTCTGACGGTGCC GACATTGCCACGGGCAGCGGCTGCCACAACTGGTCAACAGGTATCGCGGGCTGAAGTAAACGAATTAATTACCGCCTTGG GTGATGCCAATCACCCTCGCCACGCCGAAGCGGTGGATGCCCTGGTTGCACTGGGCGCAACCGTCGTGCCGGCTCTGTGT GCCGTGCTTGACCCTGATCGACCATGGTTGACGGTCTACCGGGCAACGGAAGCGCTGGCGCAGATCGGTGATGGACGGGC GACCGGCCCACTCATCAAGGTGCTCAAGCATCCCAATGCGAATGTGCGTTGGGGTGCGGTACGGGCACTGACCCAGGTTG GTGATGTGCGTGCCCTTTTCGCACTTCGTGACGTAGCGCGTTCGGATCAGGGACGAACGACCTGGGGCGAGTCGGTGCCC GGTGCCGCCCAGAGTGCGCTTGAACTGCTGAGCCGGCGCAGTATCTGGGCACAGAGCCTTGAACTGGTGAAGCTGGCCGT GGTCAGCGTGATCTTCCTGTTGTCGATGGCGCTGGCGTTTGGTGTCATTGGTACCCTTCGGAATGAGCTTGATCAGTTTG GCCGTTATGTTCCCGGTCAGACCGAATTGCCGACGCTGGTGTTACCCACACCGCGCCCAACGGCTACCCCGCGCCGGCCA ACACCGGCAAGCCAACCGACAACATTGCCGGCAACCCAGGTGATTACCGGCACGGCCCTGCAGGTAGCGAATGTTCGCCC CTTACCCGGTACGAATAATCAGCCGATTGGTCGGATTAATGCCGGCGATGAGATCATCTTCCTGGCTCGCACGGCCAACG ATCAATGGTATCTGATTCGTCTTGGCGAGCAACGGAGTCCGGACTCTTTTATTGCCAACCCCGATGGCAGTGGTACCGGC TGGGTCAATCGCGCGCTGGTTTCGCCGCCGCCAACTGAAGTGCCGATCCAGGAACCGTTACCGCTTCCTGCACCAACAGC GACGCCGTAG
Upstream 100 bases:
>100_bases CAAAGGCTGTCGCCGCGGCAGCGTTGTTGGATGTTATTGTAGAGCGTTTTGAATATTGGCTGAGCACTCGCCGGCCATCT GGTGAAGAGTTTGAGGATCG
Downstream 100 bases:
>100_bases GGCGTTTCAGGCGATTGTGGCTGCACACGTGCAATCTGTGATCTCGAAATATCTGCCTGCGCTCGGTTGGGCTGTTTTCG CCGCGTGTGTGATCACGCTC
Product: SH3 type 3 domain-containing protein
Products: NA
Alternate protein names: HEAT Repeat-Containing PBS Lyase
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MTTEPQSNQSPPEPPPAPRPTRRLTVPTLPRAAAATTGQQVSRAEVNELITALGDANHPRHAEAVDALVALGATVVPALC AVLDPDRPWLTVYRATEALAQIGDGRATGPLIKVLKHPNANVRWGAVRALTQVGDVRALFALRDVARSDQGRTTWGESVP GAAQSALELLSRRSIWAQSLELVKLAVVSVIFLLSMALAFGVIGTLRNELDQFGRYVPGQTELPTLVLPTPRPTATPRRP TPASQPTTLPATQVITGTALQVANVRPLPGTNNQPIGRINAGDEIIFLARTANDQWYLIRLGEQRSPDSFIANPDGSGTG WVNRALVSPPPTEVPIQEPLPLPAPTATP
Sequences:
>Translated_349_residues MTTEPQSNQSPPEPPPAPRPTRRLTVPTLPRAAAATTGQQVSRAEVNELITALGDANHPRHAEAVDALVALGATVVPALC AVLDPDRPWLTVYRATEALAQIGDGRATGPLIKVLKHPNANVRWGAVRALTQVGDVRALFALRDVARSDQGRTTWGESVP GAAQSALELLSRRSIWAQSLELVKLAVVSVIFLLSMALAFGVIGTLRNELDQFGRYVPGQTELPTLVLPTPRPTATPRRP TPASQPTTLPATQVITGTALQVANVRPLPGTNNQPIGRINAGDEIIFLARTANDQWYLIRLGEQRSPDSFIANPDGSGTG WVNRALVSPPPTEVPIQEPLPLPAPTATP >Mature_348_residues TTEPQSNQSPPEPPPAPRPTRRLTVPTLPRAAAATTGQQVSRAEVNELITALGDANHPRHAEAVDALVALGATVVPALCA VLDPDRPWLTVYRATEALAQIGDGRATGPLIKVLKHPNANVRWGAVRALTQVGDVRALFALRDVARSDQGRTTWGESVPG AAQSALELLSRRSIWAQSLELVKLAVVSVIFLLSMALAFGVIGTLRNELDQFGRYVPGQTELPTLVLPTPRPTATPRRPT PASQPTTLPATQVITGTALQVANVRPLPGTNNQPIGRINAGDEIIFLARTANDQWYLIRLGEQRSPDSFIANPDGSGTGW VNRALVSPPPTEVPIQEPLPLPAPTATP
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37176; Mature: 37045
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEPQSNQSPPEPPPAPRPTRRLTVPTLPRAAAATTGQQVSRAEVNELITALGDANHPR CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCC HAEAVDALVALGATVVPALCAVLDPDRPWLTVYRATEALAQIGDGRATGPLIKVLKHPNA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHCCCC NVRWGAVRALTQVGDVRALFALRDVARSDQGRTTWGESVPGAAQSALELLSRRSIWAQSL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ELVKLAVVSVIFLLSMALAFGVIGTLRNELDQFGRYVPGQTELPTLVLPTPRPTATPRRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCC TPASQPTTLPATQVITGTALQVANVRPLPGTNNQPIGRINAGDEIIFLARTANDQWYLIR CCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCEEEEE LGEQRSPDSFIANPDGSGTGWVNRALVSPPPTEVPIQEPLPLPAPTATP ECCCCCCCCEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTEPQSNQSPPEPPPAPRPTRRLTVPTLPRAAAATTGQQVSRAEVNELITALGDANHPR CCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCC HAEAVDALVALGATVVPALCAVLDPDRPWLTVYRATEALAQIGDGRATGPLIKVLKHPNA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHCCCC NVRWGAVRALTQVGDVRALFALRDVARSDQGRTTWGESVPGAAQSALELLSRRSIWAQSL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ELVKLAVVSVIFLLSMALAFGVIGTLRNELDQFGRYVPGQTELPTLVLPTPRPTATPRRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCC TPASQPTTLPATQVITGTALQVANVRPLPGTNNQPIGRINAGDEIIFLARTANDQWYLIR CCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCEEEEE LGEQRSPDSFIANPDGSGTGWVNRALVSPPPTEVPIQEPLPLPAPTATP ECCCCCCCCEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA