| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527154
Identifier: 222527154
GI number: 222527154
Start: 4883912
End: 4886047
Strand: Reverse
Name: 222527154
Synonym: Chy400_3936
Alternate gene names: NA
Gene position: 4886047-4883912 (Counterclockwise)
Preceding gene: 222527155
Following gene: 222527153
Centisome position: 92.73
GC content: 57.63
Gene sequence:
>2136_bases ATGGTATCTCCTGCTCCACGTTCTATCGTCGCAGTACAACCACACCGATGGCGGATCGCCCTGCTGATCAGACGACCGGT CATTTGGGTTGGTCTCCTGATGATAATTGGTCTAATCCTGCGTCTCTGGTTTCTTTTCATCTATCAGATCGACCCGCGTT TCTCGGCAGCCGACGATGGTGACTATTATGTGCGGGCGCTTCAGTTGGCGGTGACCGGCGAATATCGCGATAACTCGTGG CTCATCCGACCACCCGGTCATATATTCTTCTTCGCCGCAATGATCCGTATCGGGCTATGGCTGGGCGATCCGGCGATTGG GATTGCGCTGATCCGGGCCGTGCAAATTTCGCTATCGCTAGCCCTGATCCCTATTGGGTATGATCTGGCACGACGGCTCT TCGATCAGCGTACCGGCCTGATCTTCGCAGCAGTTCTGGCCCTCTGGATGCCGATGGTCGAATTGCCGGTGCTGATTCTC AGCGAACCGCTCTTCTTCTTCATGCTGGCAGTTCATGTGTGGCTGTTGGTGCGCTGGCGCGACTCGCGCCATCCCGGCTG GTTAGCTGGTGCCGGGGTAACGCTGGCTATCGCTGCGCTGGCTCGCTCACCGGGATTGTACGGGGCGATCTTTGCAATAC TCTTCATCGGTGTCAGTGCCTGGACAGTCCACCATCGTCGGCACTGGCAGCCCATTGTCGTGGCGCTGTTGGCGTTTCTG CTACCCTTTGTGCTTACCATCGCTCCCTGGACGCTGCGGAATTACCTGCTCTACCGCGATTTTATTGTGATCGATACCCT GGGGCCGGTTAATCTCTGGATCGCGATGAGTGATGCGGTACACGAAGGGCGTGGTGAGGGGGAAGCCAAAGGGATTCTAC AAGCGATTCCACAAGAAGATCGGCAACGGTTTGTGAGTGCCGAATTGCGCCGCATTCTGCAAACAGAACCGTGGCGCTTT ACCCGCAATCTCTGGCCGCATTTTCAGCATATCTGGAAGGCTCAGTTTATCGAGGATTTCTTCGTGAAAGCCAGCTTCTT CACCCGACCATTGCGGGAAGTCTGGCTTCATGGCCTGATCAGTGATCTCGCCTGGTTGAGCTTGATCCTGGCGGCACCAT TTACGCTGTTTGGACGTGGCCAGGATTGGGCAGTACGACTGTTAGCGCTCGGTTGGATTGGCTATACCTGCCTGATGGTG ATGCTCATCCACGTTGAACCGCGCTATCTGTTGCCGATCTGGTTCTGGCTGACGTTGTACGGTGCAGCGACGCTGGCCCG GTTGGGACAACACCGCTGGCGTCTGGATCGCCGGCAATTACCCGCATTGATCGTCAGCCTTGGGCTGGCCTTCCTGATTT TCAGCTACCGCAATTACCCGCAGATTATCCAGAATGGTATTTCCCGCGAGCAGGCATACGCTGCGGCGATGGCTGCGCTG CAACGCGGTGATGATGAAGCAGTAGAACAGGCATTTCGCCGCATGCTGACCGCCGACCCCGATTTTGCCGATGGTCAGGC CGAATTTGCCCGCTGGCTGCTGGCTGAAGGTCGGTATGACGAAGCCTGGCAGGTGATCGGTTCCTATCCAACCCACCGTG GTGATCTCGTGCGTGGTGCATTGGCGAGGGCGCAGGGCGATCTTGAAGCAGCGAAGGTGTTATTGCGCGATGTGGAAGAG CGCGCCGGCGAGGACGCGCAACGGCTGGCAGTGCGCTGGTTATCACCGGCACCGACGACGGCGTTAACCCTGGGTGATGA TCTTGATCTGGGGTATCTGTATGGCTTCTCATTCGGTGAGCGCACGGGTGATACAACGTTCCGCTGGTTGCAGGGTGAAG GTGCTGTGCGCCTGCCGTTGCCAACACCGCTGATCGGCAACGAGATCCTGACACTACGGCTGGCGGTGCCGCAACCGACG AACCTGACGGTGACGATTGGTGATCGGCGGTATGAGGTAAACGTTGCGCCGGGAGGCTGGCGGGTGTATCATCTGCCTGT ACCTGCGCAGATGCAGGGGGCACGTGAGGTAATCATCTTGCTCAGCGCGCCGACATTCTTGCCGTATGAGCGTTTTCCCG GTAGTACCGATGCCCGTCCGTTGAGTGTGATGGTGCAGCAAATAGCAGTTCGGTGA
Upstream 100 bases:
>100_bases GCCTACCTCCTAATCATGTACAATAGCGTCGTACATCAGAACACACCTTGCGTCTGCGTTAGACATCACAGCATGCATGA AAGGTAGCAAACAGGTCACA
Downstream 100 bases:
>100_bases AGTATCATGCAACAGATAGACACGACAGCCCAAACAGAACCGGTTGTGGTTCAGACATATCCCTTTACAGTAAGTGTGGT CATCCCGGCCTACAACGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide-Repeat Containing Protein; Tetratricopeptide Repeat-Containing Protein; TPR Repeat-Containing Protein
Number of amino acids: Translated: 711; Mature: 711
Protein sequence:
>711_residues MVSPAPRSIVAVQPHRWRIALLIRRPVIWVGLLMIIGLILRLWFLFIYQIDPRFSAADDGDYYVRALQLAVTGEYRDNSW LIRPPGHIFFFAAMIRIGLWLGDPAIGIALIRAVQISLSLALIPIGYDLARRLFDQRTGLIFAAVLALWMPMVELPVLIL SEPLFFFMLAVHVWLLVRWRDSRHPGWLAGAGVTLAIAALARSPGLYGAIFAILFIGVSAWTVHHRRHWQPIVVALLAFL LPFVLTIAPWTLRNYLLYRDFIVIDTLGPVNLWIAMSDAVHEGRGEGEAKGILQAIPQEDRQRFVSAELRRILQTEPWRF TRNLWPHFQHIWKAQFIEDFFVKASFFTRPLREVWLHGLISDLAWLSLILAAPFTLFGRGQDWAVRLLALGWIGYTCLMV MLIHVEPRYLLPIWFWLTLYGAATLARLGQHRWRLDRRQLPALIVSLGLAFLIFSYRNYPQIIQNGISREQAYAAAMAAL QRGDDEAVEQAFRRMLTADPDFADGQAEFARWLLAEGRYDEAWQVIGSYPTHRGDLVRGALARAQGDLEAAKVLLRDVEE RAGEDAQRLAVRWLSPAPTTALTLGDDLDLGYLYGFSFGERTGDTTFRWLQGEGAVRLPLPTPLIGNEILTLRLAVPQPT NLTVTIGDRRYEVNVAPGGWRVYHLPVPAQMQGAREVIILLSAPTFLPYERFPGSTDARPLSVMVQQIAVR
Sequences:
>Translated_711_residues MVSPAPRSIVAVQPHRWRIALLIRRPVIWVGLLMIIGLILRLWFLFIYQIDPRFSAADDGDYYVRALQLAVTGEYRDNSW LIRPPGHIFFFAAMIRIGLWLGDPAIGIALIRAVQISLSLALIPIGYDLARRLFDQRTGLIFAAVLALWMPMVELPVLIL SEPLFFFMLAVHVWLLVRWRDSRHPGWLAGAGVTLAIAALARSPGLYGAIFAILFIGVSAWTVHHRRHWQPIVVALLAFL LPFVLTIAPWTLRNYLLYRDFIVIDTLGPVNLWIAMSDAVHEGRGEGEAKGILQAIPQEDRQRFVSAELRRILQTEPWRF TRNLWPHFQHIWKAQFIEDFFVKASFFTRPLREVWLHGLISDLAWLSLILAAPFTLFGRGQDWAVRLLALGWIGYTCLMV MLIHVEPRYLLPIWFWLTLYGAATLARLGQHRWRLDRRQLPALIVSLGLAFLIFSYRNYPQIIQNGISREQAYAAAMAAL QRGDDEAVEQAFRRMLTADPDFADGQAEFARWLLAEGRYDEAWQVIGSYPTHRGDLVRGALARAQGDLEAAKVLLRDVEE RAGEDAQRLAVRWLSPAPTTALTLGDDLDLGYLYGFSFGERTGDTTFRWLQGEGAVRLPLPTPLIGNEILTLRLAVPQPT NLTVTIGDRRYEVNVAPGGWRVYHLPVPAQMQGAREVIILLSAPTFLPYERFPGSTDARPLSVMVQQIAVR >Mature_711_residues MVSPAPRSIVAVQPHRWRIALLIRRPVIWVGLLMIIGLILRLWFLFIYQIDPRFSAADDGDYYVRALQLAVTGEYRDNSW LIRPPGHIFFFAAMIRIGLWLGDPAIGIALIRAVQISLSLALIPIGYDLARRLFDQRTGLIFAAVLALWMPMVELPVLIL SEPLFFFMLAVHVWLLVRWRDSRHPGWLAGAGVTLAIAALARSPGLYGAIFAILFIGVSAWTVHHRRHWQPIVVALLAFL LPFVLTIAPWTLRNYLLYRDFIVIDTLGPVNLWIAMSDAVHEGRGEGEAKGILQAIPQEDRQRFVSAELRRILQTEPWRF TRNLWPHFQHIWKAQFIEDFFVKASFFTRPLREVWLHGLISDLAWLSLILAAPFTLFGRGQDWAVRLLALGWIGYTCLMV MLIHVEPRYLLPIWFWLTLYGAATLARLGQHRWRLDRRQLPALIVSLGLAFLIFSYRNYPQIIQNGISREQAYAAAMAAL QRGDDEAVEQAFRRMLTADPDFADGQAEFARWLLAEGRYDEAWQVIGSYPTHRGDLVRGALARAQGDLEAAKVLLRDVEE RAGEDAQRLAVRWLSPAPTTALTLGDDLDLGYLYGFSFGERTGDTTFRWLQGEGAVRLPLPTPLIGNEILTLRLAVPQPT NLTVTIGDRRYEVNVAPGGWRVYHLPVPAQMQGAREVIILLSAPTFLPYERFPGSTDARPLSVMVQQIAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80729; Mature: 80729
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSPAPRSIVAVQPHRWRIALLIRRPVIWVGLLMIIGLILRLWFLFIYQIDPRFSAADDG CCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC DYYVRALQLAVTGEYRDNSWLIRPPGHIFFFAAMIRIGLWLGDPAIGIALIRAVQISLSL CCEEEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEE ALIPIGYDLARRLFDQRTGLIFAAVLALWMPMVELPVLILSEPLFFFMLAVHVWLLVRWR EEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEC DSRHPGWLAGAGVTLAIAALARSPGLYGAIFAILFIGVSAWTVHHRRHWQPIVVALLAFL CCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEHHHHCCCHHHHHHHHHH LPFVLTIAPWTLRNYLLYRDFIVIDTLGPVNLWIAMSDAVHEGRGEGEAKGILQAIPQED HHHHHHHCCHHHHHHHHHHCEEEEECCCCCEEEEEEHHHHHCCCCCCHHHHHHHHCCHHH RQRFVSAELRRILQTEPWRFTRNLWPHFQHIWKAQFIEDFFVKASFFTRPLREVWLHGLI HHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDLAWLSLILAAPFTLFGRGQDWAVRLLALGWIGYTCLMVMLIHVEPRYLLPIWFWLTLY HHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GAATLARLGQHRWRLDRRQLPALIVSLGLAFLIFSYRNYPQIIQNGISREQAYAAAMAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH QRGDDEAVEQAFRRMLTADPDFADGQAEFARWLLAEGRYDEAWQVIGSYPTHRGDLVRGA HCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH LARAQGDLEAAKVLLRDVEERAGEDAQRLAVRWLSPAPTTALTLGDDLDLGYLYGFSFGE HHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHEECCCCCC RTGDTTFRWLQGEGAVRLPLPTPLIGNEILTLRLAVPQPTNLTVTIGDRRYEVNVAPGGW CCCCCCEEEEECCCEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCEEEEEEECCCCE RVYHLPVPAQMQGAREVIILLSAPTFLPYERFPGSTDARPLSVMVQQIAVR EEEEECCCHHHCCCCEEEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MVSPAPRSIVAVQPHRWRIALLIRRPVIWVGLLMIIGLILRLWFLFIYQIDPRFSAADDG CCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC DYYVRALQLAVTGEYRDNSWLIRPPGHIFFFAAMIRIGLWLGDPAIGIALIRAVQISLSL CCEEEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEE ALIPIGYDLARRLFDQRTGLIFAAVLALWMPMVELPVLILSEPLFFFMLAVHVWLLVRWR EEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEC DSRHPGWLAGAGVTLAIAALARSPGLYGAIFAILFIGVSAWTVHHRRHWQPIVVALLAFL CCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEHHHHCCCHHHHHHHHHH LPFVLTIAPWTLRNYLLYRDFIVIDTLGPVNLWIAMSDAVHEGRGEGEAKGILQAIPQED HHHHHHHCCHHHHHHHHHHCEEEEECCCCCEEEEEEHHHHHCCCCCCHHHHHHHHCCHHH RQRFVSAELRRILQTEPWRFTRNLWPHFQHIWKAQFIEDFFVKASFFTRPLREVWLHGLI HHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDLAWLSLILAAPFTLFGRGQDWAVRLLALGWIGYTCLMVMLIHVEPRYLLPIWFWLTLY HHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GAATLARLGQHRWRLDRRQLPALIVSLGLAFLIFSYRNYPQIIQNGISREQAYAAAMAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH QRGDDEAVEQAFRRMLTADPDFADGQAEFARWLLAEGRYDEAWQVIGSYPTHRGDLVRGA HCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH LARAQGDLEAAKVLLRDVEERAGEDAQRLAVRWLSPAPTTALTLGDDLDLGYLYGFSFGE HHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHEECCCCCC RTGDTTFRWLQGEGAVRLPLPTPLIGNEILTLRLAVPQPTNLTVTIGDRRYEVNVAPGGW CCCCCCEEEEECCCEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCEEEEEEECCCCE RVYHLPVPAQMQGAREVIILLSAPTFLPYERFPGSTDARPLSVMVQQIAVR EEEEECCCHHHCCCCEEEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA