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The map label for this gene is arnC [H]

Identifier: 222527153

GI number: 222527153

Start: 4882961

End: 4883905

Strand: Reverse

Name: arnC [H]

Synonym: Chy400_3935

Alternate gene names: 222527153

Gene position: 4883905-4882961 (Counterclockwise)

Preceding gene: 222527154

Following gene: 222527152

Centisome position: 92.69

GC content: 57.35

Gene sequence:

>945_bases
ATGCAACAGATAGACACGACAGCCCAAACAGAACCGGTTGTGGTTCAGACATATCCCTTTACAGTAAGTGTGGTCATCCC
GGCCTACAACGAGGCGCATGGGATCGCTCAGGTCATTGAGCGTGTGCGAGCGGTATTACCCGAGGCTGAGATTGTGGTGG
TGGATGACTGCTCGCAAGACGATACGGCCACCGTTGCACATACGGCAGGTGCGCGGGTTATCCGTCATCCCGTGAATCGC
GGCAACGGTGCCGCCGTTAAAACTGGTATTCGCCGCGCTCGTGGTGAGGTCGTTTTGCTGATGGATGCCGATGGACAGAT
GGATCCGCGCTACATTCCCGATCTGTTGGGAGGCATTGCCGCCGGTTATGATATGGTGGTGGGGGCCCGTACCCGCGAGA
CACAGGGCGACTCGATCTTTCGGCGCTGGGGCAATCGTGCCCTCGATGCGCTCGGCAGTTATCTGGTAGAGACCGAGGTG
CGCGATTTGACCAGTGGTTATCGGGCGATGCGCCGCGATGTCATCATGGAGTTCATCAATCTCTTGCCCAATCGCTACTC
CTACCCCACTACCAGCACGCTGGCGTTGCTCAAAGCGGGCTACCACGTCGGCTATGTCCCGGTCACCGGACAACGCCGGC
AGGGTGGGCGAAGTGGGCAAAAGCTCCTGCGCAACGGCATCCGGTTCGGGCTGATCATTTTGCGGATTGTCTCACTCTTC
GCACCATTGCGCGTCTACTTTCCGGTAGCGCTCTCGATGCAGGGGTTGGCTCTGCTCTCGTTTCTGATCAGCTTCTTTAT
CACCGACCCCTTCCGTTTTCATATTCCCAACTCGGCGATGGGCTTATTTGTTGGCAGCATTATTGTCTTTATGTTCGGAC
TGAACGCCGAACAGGTTGCCGCACTCCGCTTTCAGCGCCCCCTGCGTAGCAATGAAGAGGAGTAG

Upstream 100 bases:

>100_bases
CAGCGCGCCGACATTCTTGCCGTATGAGCGTTTTCCCGGTAGTACCGATGCCCGTCCGTTGAGTGTGATGGTGCAGCAAA
TAGCAGTTCGGTGAAGTATC

Downstream 100 bases:

>100_bases
TTCGTGATGCGTGTTCTGCTTTCGTGGCTACTCCGTCTGGTCGGGCCGGCGCTGTTGCTGTGGTTTATCGTGACCTGCGA
TCTCAACCTGTTGTGGCAGA

Product: glycosyl transferase family 2 protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MQQIDTTAQTEPVVVQTYPFTVSVVIPAYNEAHGIAQVIERVRAVLPEAEIVVVDDCSQDDTATVAHTAGARVIRHPVNR
GNGAAVKTGIRRARGEVVLLMDADGQMDPRYIPDLLGGIAAGYDMVVGARTRETQGDSIFRRWGNRALDALGSYLVETEV
RDLTSGYRAMRRDVIMEFINLLPNRYSYPTTSTLALLKAGYHVGYVPVTGQRRQGGRSGQKLLRNGIRFGLIILRIVSLF
APLRVYFPVALSMQGLALLSFLISFFITDPFRFHIPNSAMGLFVGSIIVFMFGLNAEQVAALRFQRPLRSNEEE

Sequences:

>Translated_314_residues
MQQIDTTAQTEPVVVQTYPFTVSVVIPAYNEAHGIAQVIERVRAVLPEAEIVVVDDCSQDDTATVAHTAGARVIRHPVNR
GNGAAVKTGIRRARGEVVLLMDADGQMDPRYIPDLLGGIAAGYDMVVGARTRETQGDSIFRRWGNRALDALGSYLVETEV
RDLTSGYRAMRRDVIMEFINLLPNRYSYPTTSTLALLKAGYHVGYVPVTGQRRQGGRSGQKLLRNGIRFGLIILRIVSLF
APLRVYFPVALSMQGLALLSFLISFFITDPFRFHIPNSAMGLFVGSIIVFMFGLNAEQVAALRFQRPLRSNEEE
>Mature_314_residues
MQQIDTTAQTEPVVVQTYPFTVSVVIPAYNEAHGIAQVIERVRAVLPEAEIVVVDDCSQDDTATVAHTAGARVIRHPVNR
GNGAAVKTGIRRARGEVVLLMDADGQMDPRYIPDLLGGIAAGYDMVVGARTRETQGDSIFRRWGNRALDALGSYLVETEV
RDLTSGYRAMRRDVIMEFINLLPNRYSYPTTSTLALLKAGYHVGYVPVTGQRRQGGRSGQKLLRNGIRFGLIILRIVSLF
APLRVYFPVALSMQGLALLSFLISFFITDPFRFHIPNSAMGLFVGSIIVFMFGLNAEQVAALRFQRPLRSNEEE

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=216, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=6e-13,
Organism=Escherichia coli, GI1788588, Length=213, Percent_Identity=27.2300469483568, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71999402, Length=211, Percent_Identity=29.3838862559242, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24585265, Length=214, Percent_Identity=27.5700934579439, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 34731; Mature: 34731

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQIDTTAQTEPVVVQTYPFTVSVVIPAYNEAHGIAQVIERVRAVLPEAEIVVVDDCSQD
CCCCCCCCCCCCEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
DTATVAHTAGARVIRHPVNRGNGAAVKTGIRRARGEVVLLMDADGQMDPRYIPDLLGGIA
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH
AGYDMVVGARTRETQGDSIFRRWGNRALDALGSYLVETEVRDLTSGYRAMRRDVIMEFIN
CCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLPNRYSYPTTSTLALLKAGYHVGYVPVTGQRRQGGRSGQKLLRNGIRFGLIILRIVSLF
HCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
APLRVYFPVALSMQGLALLSFLISFFITDPFRFHIPNSAMGLFVGSIIVFMFGLNAEQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHH
ALRFQRPLRSNEEE
HHHHHHHCCCCCCC
>Mature Secondary Structure
MQQIDTTAQTEPVVVQTYPFTVSVVIPAYNEAHGIAQVIERVRAVLPEAEIVVVDDCSQD
CCCCCCCCCCCCEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
DTATVAHTAGARVIRHPVNRGNGAAVKTGIRRARGEVVLLMDADGQMDPRYIPDLLGGIA
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH
AGYDMVVGARTRETQGDSIFRRWGNRALDALGSYLVETEVRDLTSGYRAMRRDVIMEFIN
CCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLPNRYSYPTTSTLALLKAGYHVGYVPVTGQRRQGGRSGQKLLRNGIRFGLIILRIVSLF
HCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
APLRVYFPVALSMQGLALLSFLISFFITDPFRFHIPNSAMGLFVGSIIVFMFGLNAEQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHH
ALRFQRPLRSNEEE
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA