| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222527129
Identifier: 222527129
GI number: 222527129
Start: 4861257
End: 4861904
Strand: Reverse
Name: 222527129
Synonym: Chy400_3910
Alternate gene names: NA
Gene position: 4861904-4861257 (Counterclockwise)
Preceding gene: 222527132
Following gene: 222527128
Centisome position: 92.27
GC content: 47.84
Gene sequence:
>648_bases GTGAACTCGCCTGCCTTCGATATTTGTGGGCGGGCGAACCGGGGTGAGATAGATGAGGTGTGGATATACAACGGTCCCTG GTTTGGTTTCTATGAGTCTACACTGGTAGGACCGAATGCGTATTTCTATAATTCTATGCCGGTACCGGGTCCGCACTCGT GCAATCGCATCATACCGATTATGGGGCCAAGCCCTGAGCGTGATCTGGATAGTGCCATTCATAATTTTGGGCATCGCGCA GAATCGACAATGACCAGAGTGTACGGTAGCTGGCAGCAAAACCGCACTACTCACAATTGGGAGAGGTTTGCATTAGTTAA GGCGTTGTCGCCAAATTACTCGTATAGTGGATGTGGCAATATTCACTATCCGCCGAATGGTGTACGTGATTACGATTACA CTAATCCCTCTACAGTGTTGTCGAATTGTGCCGATTTTAGTAATTACCCAAACCTTAGCAATCCTTTGAGTACGGCAACA CCTGTTTCTTGCTCGCTATGGAACTGTAATCATCTTGGTTTTCTGGAGTTTTGGTTCAGCCATCTACCGGCAAAAACCGG ATGTGGTCCCGATTCGATTGCCAGTAACTGGTGGAAGTATTTTAGCGATCCCCAACTGGCTCTGAATCCGACTTCACTTT GTCGGTAG
Upstream 100 bases:
>100_bases CGCGGAGGCCAGGTTTGCTCGTCATGAACATCGAATCGAGTGGCAATGAAGAAGATACCTTCTCGTAGATGTTTTTTGAA ATAGGTTCTACAATGCAATC
Downstream 100 bases:
>100_bases CTACCTTGATGGATTGTGTAGAACCTGTTTCGTAAATATCCTGTCAGTCCGTTTCGTTATATTACGTGCGTGAACCGGGT TTCTGCACTGCCCGCACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MNSPAFDICGRANRGEIDEVWIYNGPWFGFYESTLVGPNAYFYNSMPVPGPHSCNRIIPIMGPSPERDLDSAIHNFGHRA ESTMTRVYGSWQQNRTTHNWERFALVKALSPNYSYSGCGNIHYPPNGVRDYDYTNPSTVLSNCADFSNYPNLSNPLSTAT PVSCSLWNCNHLGFLEFWFSHLPAKTGCGPDSIASNWWKYFSDPQLALNPTSLCR
Sequences:
>Translated_215_residues MNSPAFDICGRANRGEIDEVWIYNGPWFGFYESTLVGPNAYFYNSMPVPGPHSCNRIIPIMGPSPERDLDSAIHNFGHRA ESTMTRVYGSWQQNRTTHNWERFALVKALSPNYSYSGCGNIHYPPNGVRDYDYTNPSTVLSNCADFSNYPNLSNPLSTAT PVSCSLWNCNHLGFLEFWFSHLPAKTGCGPDSIASNWWKYFSDPQLALNPTSLCR >Mature_215_residues MNSPAFDICGRANRGEIDEVWIYNGPWFGFYESTLVGPNAYFYNSMPVPGPHSCNRIIPIMGPSPERDLDSAIHNFGHRA ESTMTRVYGSWQQNRTTHNWERFALVKALSPNYSYSGCGNIHYPPNGVRDYDYTNPSTVLSNCADFSNYPNLSNPLSTAT PVSCSLWNCNHLGFLEFWFSHLPAKTGCGPDSIASNWWKYFSDPQLALNPTSLCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24223; Mature: 24223
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPAFDICGRANRGEIDEVWIYNGPWFGFYESTLVGPNAYFYNSMPVPGPHSCNRIIPI CCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHEEECCCCEEECCCCCCCCCCCCEEEEC MGPSPERDLDSAIHNFGHRAESTMTRVYGSWQQNRTTHNWERFALVKALSPNYSYSGCGN CCCCCCHHHHHHHHHHCCHHHHHHHHHHHCHHHCCCCCCHHHHHEEHHCCCCCCCCCCCC IHYPPNGVRDYDYTNPSTVLSNCADFSNYPNLSNPLSTATPVSCSLWNCNHLGFLEFWFS CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHH HLPAKTGCGPDSIASNWWKYFSDPQLALNPTSLCR HCCCCCCCCHHHHHHHHHHHHCCCCEEECHHHHCC >Mature Secondary Structure MNSPAFDICGRANRGEIDEVWIYNGPWFGFYESTLVGPNAYFYNSMPVPGPHSCNRIIPI CCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHEEECCCCEEECCCCCCCCCCCCEEEEC MGPSPERDLDSAIHNFGHRAESTMTRVYGSWQQNRTTHNWERFALVKALSPNYSYSGCGN CCCCCCHHHHHHHHHHCCHHHHHHHHHHHCHHHCCCCCCHHHHHEEHHCCCCCCCCCCCC IHYPPNGVRDYDYTNPSTVLSNCADFSNYPNLSNPLSTATPVSCSLWNCNHLGFLEFWFS CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHH HLPAKTGCGPDSIASNWWKYFSDPQLALNPTSLCR HCCCCCCCCHHHHHHHHHHHHCCCCEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA