| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527132
Identifier: 222527132
GI number: 222527132
Start: 4863375
End: 4864073
Strand: Reverse
Name: 222527132
Synonym: Chy400_3914
Alternate gene names: NA
Gene position: 4864073-4863375 (Counterclockwise)
Preceding gene: 222527145
Following gene: 222527129
Centisome position: 92.32
GC content: 46.07
Gene sequence:
>699_bases ATGAACATACCAGCAAAGCAGTACGCTCTGACAGTGCTTATTGGTGTGATCTTGTTTCTTGCTGCTGGAATTGCTCCTCC CGCTTTACAGGCAATAGAAGAAACTAACCCATTAACGGTTAATAATCCATCATCGCTACATAATGAATGTCCTTCAGTCG GCGGATGGATGTGGACTCCTGGCCCGATGATGCCAGAAATAGCCCACAAAGTTCAACACATCCTGCATTCGGAAGGAATT GATGCCCAGGTGATGGCGCGGAGTTTTGGCGAAACTGACCCTTGTGGTCATTTTAGACCCTATGAGATAGACTTTTCAAT TACAATTAATCGTCCTTTTACTTCGCTAACATCTGAACAGCAAACGCTCAGTGAAACAATACAGGCTGCGCTGGCAAACG TTGCACATCACGCTGTCGGTAATGTCCAGATCACGTTCGCTTCTCACAAGAGCACTGTCACGGTACGATACGATGATCTA TTGGCATCTACAGCGAATCAAACCTCTCCATCCATCAGCAACTCGAATATACCCCCTCACCATCACTCATCCTTCAGTGG CGGTATGCAAAGTCTGCCGTATGATATATTCCTCCCAATCGTTGCTCGCTCGTTTGCACCTGCCGAAATTATTGTCAGAA AGGTGTATGTCATCGTATATGACCCAATTCTAAGTAATGGGCAGCATCTGAGTGACTAG
Upstream 100 bases:
>100_bases TTGCTCTACGTGTCAGGTAAACCTGATATCAATTATTCGGATAAGCTCTGAGGATCATCGTATTTGCACACGTTTGTATG GTTGATAGGGAGAATAAAGA
Downstream 100 bases:
>100_bases AACTCATTTCAAAATTCGGTCAACGCACCACAACATGATAGCGACGAGACAAAACGCACGAGAGCTATGCAGATGACGAT CATAGCGCACCACCAACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MNIPAKQYALTVLIGVILFLAAGIAPPALQAIEETNPLTVNNPSSLHNECPSVGGWMWTPGPMMPEIAHKVQHILHSEGI DAQVMARSFGETDPCGHFRPYEIDFSITINRPFTSLTSEQQTLSETIQAALANVAHHAVGNVQITFASHKSTVTVRYDDL LASTANQTSPSISNSNIPPHHHSSFSGGMQSLPYDIFLPIVARSFAPAEIIVRKVYVIVYDPILSNGQHLSD
Sequences:
>Translated_232_residues MNIPAKQYALTVLIGVILFLAAGIAPPALQAIEETNPLTVNNPSSLHNECPSVGGWMWTPGPMMPEIAHKVQHILHSEGI DAQVMARSFGETDPCGHFRPYEIDFSITINRPFTSLTSEQQTLSETIQAALANVAHHAVGNVQITFASHKSTVTVRYDDL LASTANQTSPSISNSNIPPHHHSSFSGGMQSLPYDIFLPIVARSFAPAEIIVRKVYVIVYDPILSNGQHLSD >Mature_232_residues MNIPAKQYALTVLIGVILFLAAGIAPPALQAIEETNPLTVNNPSSLHNECPSVGGWMWTPGPMMPEIAHKVQHILHSEGI DAQVMARSFGETDPCGHFRPYEIDFSITINRPFTSLTSEQQTLSETIQAALANVAHHAVGNVQITFASHKSTVTVRYDDL LASTANQTSPSISNSNIPPHHHSSFSGGMQSLPYDIFLPIVARSFAPAEIIVRKVYVIVYDPILSNGQHLSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25202; Mature: 25202
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPAKQYALTVLIGVILFLAAGIAPPALQAIEETNPLTVNNPSSLHNECPSVGGWMWTP CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCHHHHHCCCCCCCCCCCC GPMMPEIAHKVQHILHSEGIDAQVMARSFGETDPCGHFRPYEIDFSITINRPFTSLTSEQ CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHH QTLSETIQAALANVAHHAVGNVQITFASHKSTVTVRYDDLLASTANQTSPSISNSNIPPH HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCC HHSSFSGGMQSLPYDIFLPIVARSFAPAEIIVRKVYVIVYDPILSNGQHLSD CCCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHEEECCHHCCCCCCCC >Mature Secondary Structure MNIPAKQYALTVLIGVILFLAAGIAPPALQAIEETNPLTVNNPSSLHNECPSVGGWMWTP CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCHHHHHCCCCCCCCCCCC GPMMPEIAHKVQHILHSEGIDAQVMARSFGETDPCGHFRPYEIDFSITINRPFTSLTSEQ CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHH QTLSETIQAALANVAHHAVGNVQITFASHKSTVTVRYDDLLASTANQTSPSISNSNIPPH HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCC HHSSFSGGMQSLPYDIFLPIVARSFAPAEIIVRKVYVIVYDPILSNGQHLSD CCCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHEEECCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA