| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527126
Identifier: 222527126
GI number: 222527126
Start: 4858704
End: 4859498
Strand: Reverse
Name: 222527126
Synonym: Chy400_3907
Alternate gene names: NA
Gene position: 4859498-4858704 (Counterclockwise)
Preceding gene: 222527128
Following gene: 222527125
Centisome position: 92.23
GC content: 64.65
Gene sequence:
>795_bases ATGGAACCACCATTTCCGGGCATGGATCCGTATCTGGAGCGTTCGAGCCTGTGGCCTGATGTACACCATCGGCTGGTGAA CGCAATGAGTGACTATTTACAGGCCCAAATTGCTCCGGGGTACGTTGCGCAGATTACTCCCTACGTCGCACTGGAGCAGG TTGAGATCACGGCACCCCGGCGCGCCCTGGTGCCCGATGTCGGTGTGTTCGAGCGGGAAAGCGCAGCGGTAACGCCGGCG ACAGCCGTGGTAGACACCCCCTCACTGACCGGAACGGCCTTGCTCGAAGTGCCCACCCGCTACGCCCGGCTGGAAATTCG CACCGTGACTGATGATACCCTGGTCACCGCTATTGAACTGCTCTCACCGGTGAACAAGCGCCCGACCCCCGACGGTGCCG ATGCTTACGAGCAAAAGCGACGGGAGCTGTTTCAAAGTGGGGTACACCTGCTCGAAATCGACCTGCTGCGAGGTGGCCGC CGGCCACGGCTGGCCCGCCCCGATCCGCTCCCCGCTGCCCCTTACGTAGTCTTCCTCAGCCGCGTCGAACGCTGGCCGGA GATTGACATCTGGCTCTGTCCGCTGGCCAAACCGCTCCCGACGGTGCCGGTGCCGTTGCGGCGTCCCGACCCCGATGTGC CCTTGCCGTTGACCACCCTCGTGCATCAGGTCTACCGCAACGCACGCTACGACCTGCGGATCGACTACCGTCAACCCCCG CCGCCGCCCGACCTCACCCCCGACGAGACGGCCTGGCTCGATGCCCACCTGCGGGCACGCGGGTTACGGCAGTGA
Upstream 100 bases:
>100_bases ACTGATGAACGAAGATTTGATATAACACGGTAACATGGTTCAGCCGCTGACAAGATGCCGTCCATGCTATAATATCTACA CCACTACCCAGGAGCAATCT
Downstream 100 bases:
>100_bases TGCCCGTTTCTGGAGTATTTGTATCACCCGTTTCCCTGTCTTGGGCCACGTATACCCTCGCTTGGAGCGTCTCCAGGTAC TGACGACAGTTACTTCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MEPPFPGMDPYLERSSLWPDVHHRLVNAMSDYLQAQIAPGYVAQITPYVALEQVEITAPRRALVPDVGVFERESAAVTPA TAVVDTPSLTGTALLEVPTRYARLEIRTVTDDTLVTAIELLSPVNKRPTPDGADAYEQKRRELFQSGVHLLEIDLLRGGR RPRLARPDPLPAAPYVVFLSRVERWPEIDIWLCPLAKPLPTVPVPLRRPDPDVPLPLTTLVHQVYRNARYDLRIDYRQPP PPPDLTPDETAWLDAHLRARGLRQ
Sequences:
>Translated_264_residues MEPPFPGMDPYLERSSLWPDVHHRLVNAMSDYLQAQIAPGYVAQITPYVALEQVEITAPRRALVPDVGVFERESAAVTPA TAVVDTPSLTGTALLEVPTRYARLEIRTVTDDTLVTAIELLSPVNKRPTPDGADAYEQKRRELFQSGVHLLEIDLLRGGR RPRLARPDPLPAAPYVVFLSRVERWPEIDIWLCPLAKPLPTVPVPLRRPDPDVPLPLTTLVHQVYRNARYDLRIDYRQPP PPPDLTPDETAWLDAHLRARGLRQ >Mature_264_residues MEPPFPGMDPYLERSSLWPDVHHRLVNAMSDYLQAQIAPGYVAQITPYVALEQVEITAPRRALVPDVGVFERESAAVTPA TAVVDTPSLTGTALLEVPTRYARLEIRTVTDDTLVTAIELLSPVNKRPTPDGADAYEQKRRELFQSGVHLLEIDLLRGGR RPRLARPDPLPAAPYVVFLSRVERWPEIDIWLCPLAKPLPTVPVPLRRPDPDVPLPLTTLVHQVYRNARYDLRIDYRQPP PPPDLTPDETAWLDAHLRARGLRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29751; Mature: 29751
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPPFPGMDPYLERSSLWPDVHHRLVNAMSDYLQAQIAPGYVAQITPYVALEQVEITAPR CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHEEEEEEECCCC RALVPDVGVFERESAAVTPATAVVDTPSLTGTALLEVPTRYARLEIRTVTDDTLVTAIEL HHHCCCCCCCCCCCCCCCCCHHEEECCCCCCHHHHHCCCCEEEEEEEECCCHHHHHHHHH LSPVNKRPTPDGADAYEQKRRELFQSGVHLLEIDLLRGGRRPRLARPDPLPAAPYVVFLS HHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHH RVERWPEIDIWLCPLAKPLPTVPVPLRRPDPDVPLPLTTLVHQVYRNARYDLRIDYRQPP HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC PPPDLTPDETAWLDAHLRARGLRQ CCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MEPPFPGMDPYLERSSLWPDVHHRLVNAMSDYLQAQIAPGYVAQITPYVALEQVEITAPR CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHEEEEEEECCCC RALVPDVGVFERESAAVTPATAVVDTPSLTGTALLEVPTRYARLEIRTVTDDTLVTAIEL HHHCCCCCCCCCCCCCCCCCHHEEECCCCCCHHHHHCCCCEEEEEEEECCCHHHHHHHHH LSPVNKRPTPDGADAYEQKRRELFQSGVHLLEIDLLRGGRRPRLARPDPLPAAPYVVFLS HHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHH RVERWPEIDIWLCPLAKPLPTVPVPLRRPDPDVPLPLTTLVHQVYRNARYDLRIDYRQPP HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC PPPDLTPDETAWLDAHLRARGLRQ CCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA