| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527125
Identifier: 222527125
GI number: 222527125
Start: 4857765
End: 4858559
Strand: Reverse
Name: 222527125
Synonym: Chy400_3906
Alternate gene names: NA
Gene position: 4858559-4857765 (Counterclockwise)
Preceding gene: 222527126
Following gene: 222527123
Centisome position: 92.21
GC content: 64.91
Gene sequence:
>795_bases ATGGAACCACCATTTCCGGGCATGGATCCGTATCTGGAGCGTTCGAGCCTGTGGCCTGATGTACACATCGGGCTGATTAC GGCTATTCGCGACTATGTACAGGCCCAGATTGCACCGGGGTACGTTGCGCAGATTACTCCCTACGTCGCGCCAGAGCAGG TTGAGATCACAGTGCCCCGGCGCGCCCTGGTGCCCGATGTCGGTGTGTTCGAGCGGGAAAGCGCAGCGGTAACGCCGGCA ACAGCCGTGGTGGACACGCCATCACTGACCGGAACAGCCTTGCTCGAAGTGCCCACCCGCTACGCACGGCTGGAAATTCG CACCGTGACCGACGATACCCTGGTCACCGCTATTGAACTGCTCTCACCGGTGAACAAGCGTCCGACCCCCGACGGTGCCG ATGCTTACGAGCAAAAGCGACGGGAGCTGTTTCAAAGTGGGGTGCACCTGCTCGAAATCGACCTGCTGCGGGGTGGCCGC CGGCCACGGCTGGCTCGCCCCGATCCGCTCCCCGCTGCCCCTTACGTAATCTTCCTCAGCCGCGTCGAACGCTGGCCGGA GATTGACATCTGGCTCTGTCCGCTGGCCAAACCGCTCCCGACGGTGCCGGTGCCGTTGCGGCGTCCCGACCCCGATGTGC CCTTGCCGTTGACCACCCTCGTGCATCAGGTCTACCGCAACGCACGCTACGACCTGCGGATCGACTACCGTCAACCCCCG CCGCCGCCCGACCTCACCCCCGACGAGGCGGCCTGGCTCGATGCCCACCTGCGGGCACGCGGGTTGCGTGCGTAG
Upstream 100 bases:
>100_bases GCCACGTATACCCTCGCTTGGAGCGTCTCCAGGTACTGACGACAGTTACTTCGAGCACACTATTTGCTATAATCTCTACA GAACTACCCAGGAGCAATCT
Downstream 100 bases:
>100_bases CAGTCATAACCATCCGGCCTCTGTCACCCGACCGCTTCATGTGGCAAAGGCATCTCCCCGTGTCGCAGCCGTTCGGCGAG TGCAATGGTCTCCGGTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MEPPFPGMDPYLERSSLWPDVHIGLITAIRDYVQAQIAPGYVAQITPYVAPEQVEITVPRRALVPDVGVFERESAAVTPA TAVVDTPSLTGTALLEVPTRYARLEIRTVTDDTLVTAIELLSPVNKRPTPDGADAYEQKRRELFQSGVHLLEIDLLRGGR RPRLARPDPLPAAPYVIFLSRVERWPEIDIWLCPLAKPLPTVPVPLRRPDPDVPLPLTTLVHQVYRNARYDLRIDYRQPP PPPDLTPDEAAWLDAHLRARGLRA
Sequences:
>Translated_264_residues MEPPFPGMDPYLERSSLWPDVHIGLITAIRDYVQAQIAPGYVAQITPYVAPEQVEITVPRRALVPDVGVFERESAAVTPA TAVVDTPSLTGTALLEVPTRYARLEIRTVTDDTLVTAIELLSPVNKRPTPDGADAYEQKRRELFQSGVHLLEIDLLRGGR RPRLARPDPLPAAPYVIFLSRVERWPEIDIWLCPLAKPLPTVPVPLRRPDPDVPLPLTTLVHQVYRNARYDLRIDYRQPP PPPDLTPDEAAWLDAHLRARGLRA >Mature_264_residues MEPPFPGMDPYLERSSLWPDVHIGLITAIRDYVQAQIAPGYVAQITPYVAPEQVEITVPRRALVPDVGVFERESAAVTPA TAVVDTPSLTGTALLEVPTRYARLEIRTVTDDTLVTAIELLSPVNKRPTPDGADAYEQKRRELFQSGVHLLEIDLLRGGR RPRLARPDPLPAAPYVIFLSRVERWPEIDIWLCPLAKPLPTVPVPLRRPDPDVPLPLTTLVHQVYRNARYDLRIDYRQPP PPPDLTPDEAAWLDAHLRARGLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29604; Mature: 29604
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPPFPGMDPYLERSSLWPDVHIGLITAIRDYVQAQIAPGYVAQITPYVAPEQVEITVPR CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEECC RALVPDVGVFERESAAVTPATAVVDTPSLTGTALLEVPTRYARLEIRTVTDDTLVTAIEL HHHCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEEEEECCHHHHHHHHH LSPVNKRPTPDGADAYEQKRRELFQSGVHLLEIDLLRGGRRPRLARPDPLPAAPYVIFLS HHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHH RVERWPEIDIWLCPLAKPLPTVPVPLRRPDPDVPLPLTTLVHQVYRNARYDLRIDYRQPP HHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC PPPDLTPDEAAWLDAHLRARGLRA CCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MEPPFPGMDPYLERSSLWPDVHIGLITAIRDYVQAQIAPGYVAQITPYVAPEQVEITVPR CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEECC RALVPDVGVFERESAAVTPATAVVDTPSLTGTALLEVPTRYARLEIRTVTDDTLVTAIEL HHHCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEEEEECCHHHHHHHHH LSPVNKRPTPDGADAYEQKRRELFQSGVHLLEIDLLRGGRRPRLARPDPLPAAPYVIFLS HHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHH RVERWPEIDIWLCPLAKPLPTVPVPLRRPDPDVPLPLTTLVHQVYRNARYDLRIDYRQPP HHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC PPPDLTPDEAAWLDAHLRARGLRA CCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA