| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527111
Identifier: 222527111
GI number: 222527111
Start: 4840252
End: 4841283
Strand: Reverse
Name: 222527111
Synonym: Chy400_3892
Alternate gene names: NA
Gene position: 4841283-4840252 (Counterclockwise)
Preceding gene: 222527113
Following gene: 222527110
Centisome position: 91.88
GC content: 55.23
Gene sequence:
>1032_bases ATGGAACAAAAAGCACCTGCAACTTCACTGCGCACCAGCCTGCGCAAATCAATTCTCACCTCGCTCGCCATCGGCCTGGC GGTCGTGATCGTGATCAGTCTGTTCAGCGATCTACGTGCCGTCGGTAATGATCTGCTGTCATTCGATTGGATGCTGTTGC CGCTGATCCTGGTTGGCACCATCATCAATTACTGGCTACGCTGGCTGAAATGGGATTACTATCTACGCTACCTGAAGCTT GACCGCAATATCGACCGCTCGACCAGCGGTCTCATTTTTACTGCCGGTCTGGTCATGTCGGTAACACCGGGCAAGATGGG AGAAGTCTTGAAGTCATTTCTGCTGCGCCAGCGCAACGGCACCGCGATCAGCCGGTCGGCGCCGATTGTTCTGGCCGAGC GTCTGACCGATGGCATTGCCATGCTTCTCTTAATGGGATTGGGGCTGACGCTCTACCCGCCGGCGCGACCACTGTTTATC GTGCTGGTACTGCTGACGATTGCCGGGATCGTGATTGTCCAGCGTCAGGCGCTGGCGCTCTCGATCATCAGGTTCGTCGC CTGCTTACCATTTGGGCAGCGCGTGGCCCCTCGTCTGGAAACAATTTACACAACCACCGCGCAATTACTGCATTGGCGCA TTCTGCTGGTTTCCACCCTGATCAGCGTGGTTTCATGGGGTTTTGAGTGTGTTGCTTTCTTCTTCGTGCTGATGGGAGTA GGTAGCGATCCCTCGTGGTTGTTGCTGTTGCAGGCAACATTTATCTTTGCTGCCAGCACCCTCTTCGGTCTGGTCTCATT TCTGCCCGGCGGTTTGGGTGCATCAGAAGTAAGTAGCGTTGGTTTACTGGTGGCCCTGGTTGGCTTAAGCGCCAGTGCCG CAACGACGGCAACGATTGTGATCAGGTTCTGTACACTGTGGTTCGGGGTATTGTTGGGAGTGATCGCACTGGCCTGGCTG AGCCGTCGTTCGGCCACAGCAGGTGTGCAAGACGATGTAACTTCGTTGAGTGATGTTTCGGAGGTGCTATGA
Upstream 100 bases:
>100_bases GCCGTCAGGTAATTGAATCCCGATCAATCACCCCATTTGTGCGCGATGGTATGCCAACAGCACATGAACATCATAGCCTC TATGCTATAATTGAGCCGCT
Downstream 100 bases:
>100_bases CATCGGTCTTTACGCGAATTGTCCGCGGTGAAATTCCGGCGTTCAAGCTGTATGAAGATGATCTGACCCTCTCGTTTCTT GACATCAATCCAGCAGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MEQKAPATSLRTSLRKSILTSLAIGLAVVIVISLFSDLRAVGNDLLSFDWMLLPLILVGTIINYWLRWLKWDYYLRYLKL DRNIDRSTSGLIFTAGLVMSVTPGKMGEVLKSFLLRQRNGTAISRSAPIVLAERLTDGIAMLLLMGLGLTLYPPARPLFI VLVLLTIAGIVIVQRQALALSIIRFVACLPFGQRVAPRLETIYTTTAQLLHWRILLVSTLISVVSWGFECVAFFFVLMGV GSDPSWLLLLQATFIFAASTLFGLVSFLPGGLGASEVSSVGLLVALVGLSASAATTATIVIRFCTLWFGVLLGVIALAWL SRRSATAGVQDDVTSLSDVSEVL
Sequences:
>Translated_343_residues MEQKAPATSLRTSLRKSILTSLAIGLAVVIVISLFSDLRAVGNDLLSFDWMLLPLILVGTIINYWLRWLKWDYYLRYLKL DRNIDRSTSGLIFTAGLVMSVTPGKMGEVLKSFLLRQRNGTAISRSAPIVLAERLTDGIAMLLLMGLGLTLYPPARPLFI VLVLLTIAGIVIVQRQALALSIIRFVACLPFGQRVAPRLETIYTTTAQLLHWRILLVSTLISVVSWGFECVAFFFVLMGV GSDPSWLLLLQATFIFAASTLFGLVSFLPGGLGASEVSSVGLLVALVGLSASAATTATIVIRFCTLWFGVLLGVIALAWL SRRSATAGVQDDVTSLSDVSEVL >Mature_343_residues MEQKAPATSLRTSLRKSILTSLAIGLAVVIVISLFSDLRAVGNDLLSFDWMLLPLILVGTIINYWLRWLKWDYYLRYLKL DRNIDRSTSGLIFTAGLVMSVTPGKMGEVLKSFLLRQRNGTAISRSAPIVLAERLTDGIAMLLLMGLGLTLYPPARPLFI VLVLLTIAGIVIVQRQALALSIIRFVACLPFGQRVAPRLETIYTTTAQLLHWRILLVSTLISVVSWGFECVAFFFVLMGV GSDPSWLLLLQATFIFAASTLFGLVSFLPGGLGASEVSSVGLLVALVGLSASAATTATIVIRFCTLWFGVLLGVIALAWL SRRSATAGVQDDVTSLSDVSEVL
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37251; Mature: 37251
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQKAPATSLRTSLRKSILTSLAIGLAVVIVISLFSDLRAVGNDLLSFDWMLLPLILVGT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IINYWLRWLKWDYYLRYLKLDRNIDRSTSGLIFTAGLVMSVTPGKMGEVLKSFLLRQRNG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHCCCC TAISRSAPIVLAERLTDGIAMLLLMGLGLTLYPPARPLFIVLVLLTIAGIVIVQRQALAL CEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SIIRFVACLPFGQRVAPRLETIYTTTAQLLHWRILLVSTLISVVSWGFECVAFFFVLMGV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSDPSWLLLLQATFIFAASTLFGLVSFLPGGLGASEVSSVGLLVALVGLSASAATTATIV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH IRFCTLWFGVLLGVIALAWLSRRSATAGVQDDVTSLSDVSEVL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC >Mature Secondary Structure MEQKAPATSLRTSLRKSILTSLAIGLAVVIVISLFSDLRAVGNDLLSFDWMLLPLILVGT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IINYWLRWLKWDYYLRYLKLDRNIDRSTSGLIFTAGLVMSVTPGKMGEVLKSFLLRQRNG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHCCCC TAISRSAPIVLAERLTDGIAMLLLMGLGLTLYPPARPLFIVLVLLTIAGIVIVQRQALAL CEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SIIRFVACLPFGQRVAPRLETIYTTTAQLLHWRILLVSTLISVVSWGFECVAFFFVLMGV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSDPSWLLLLQATFIFAASTLFGLVSFLPGGLGASEVSSVGLLVALVGLSASAATTATIV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH IRFCTLWFGVLLGVIALAWLSRRSATAGVQDDVTSLSDVSEVL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA