| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is sphX [H]
Identifier: 222527090
GI number: 222527090
Start: 4816308
End: 4817396
Strand: Direct
Name: sphX [H]
Synonym: Chy400_3869
Alternate gene names: 222527090
Gene position: 4816308-4817396 (Clockwise)
Preceding gene: 222527085
Following gene: 222527091
Centisome position: 91.41
GC content: 55.37
Gene sequence:
>1089_bases ATGCGATTATTGCGTATCATCTACTTCAGTTTGATCACGCTCCTGCTTGTTGCCTGCGGTACAGGTTTATCACCTACCGC ACAGCCAGAAGCTACCCCTTCTCCAACCTCCGAAGCGCCGCTGCTCTCGCCCACAGCGGCGCTTCGCTTGCCGGATACCG ATCTCGCCCGGCTTGCCGGCGAAATCAAGATCGACGGATCGAGTACCGTCTTTCCAATCACTGAACGGGTAGCAGTTGCA TTCGGCGACCTGGCTCCTGATGTTACAATCCGCCTGGGAGTGAGCGGTACAGGGGGTGGATTTACCCGCTTTTGCGCCGG TGAGACCGACATCTCGAACGCTTCGCGGCCCATCAAGCAGAAAGAAATCGACGCCTGCGCGGCGTCTGGTATCACCTTTA TCGAATTACCGGTCGCGTTCGATGGCCTGTCGGTGGTTGTGCATCCGCAAAACACCTGGGTCGACTGTCTGACCGTCGCT GAGCTGAATCTGATGTGGGCGCCAGAGGCAACCAACCGGATCACGCGCTGGAATCAGATTCGCGCCGAATGGCCCGCTGA GCCTTTGCATCTCTACGGTGCCGGTGTTGACTCCGGAACCTATGACTACTTCACCTCGGCAATTGTTGGCGCAGAGGGAG TGAGTAGAAGCGACTATACTGCCAGCGAAGACGATTATCTCCTGGCCCAGGATGTTGCCGCCGACCGGCTGGGTTTGGGC TTTTTTGGCTATGCCTATTACGCTGAATATGCCGATCAATTACGTGCGGTCGCCATCGATAATGGTCAGGGCTGTGTTGC GCCAACAGTTAAAACAATTGTTGATGGAAGCTATCAACCGCTCTCGCGCCCAATCTTTATCTATGTGCGCGCCGACAGTC TAAATCGACCAGAGATTGCAGCATTTGTCAGATTCTACGTACAAAATGGTGCCATGTTTGCTGAGCAAGCCCTGTACGTT CCCCTACCGGAAACTGTCTATCAGCTTGCCTTACAGCGGGTGGAGCGACGGATCACCGGTTCCGTCTTTTCCGGCGGGTC GCAGGTCGGTCTATCAATCGAGCAACTGTTGCAACTAGAGGATCGCTAG
Upstream 100 bases:
>100_bases TAATATTTCCTTAACCAACGACATAGCGTCAGAACGCTATAATAAGACAGGTTGTGCGGTACAACAGAATGACGGCATTA AAGCATAAACACAGCCACGT
Downstream 100 bases:
>100_bases CGATGCGCTTTCCGATTCGCGTAAAGTTGTTGGGAGCACTGGCCATCGACCTCCTGTTGATGATGATCCTTGGCGTCTTT GCCATGCATCAGATGGCCGT
Product: phosphate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MRLLRIIYFSLITLLLVACGTGLSPTAQPEATPSPTSEAPLLSPTAALRLPDTDLARLAGEIKIDGSSTVFPITERVAVA FGDLAPDVTIRLGVSGTGGGFTRFCAGETDISNASRPIKQKEIDACAASGITFIELPVAFDGLSVVVHPQNTWVDCLTVA ELNLMWAPEATNRITRWNQIRAEWPAEPLHLYGAGVDSGTYDYFTSAIVGAEGVSRSDYTASEDDYLLAQDVAADRLGLG FFGYAYYAEYADQLRAVAIDNGQGCVAPTVKTIVDGSYQPLSRPIFIYVRADSLNRPEIAAFVRFYVQNGAMFAEQALYV PLPETVYQLALQRVERRITGSVFSGGSQVGLSIEQLLQLEDR
Sequences:
>Translated_362_residues MRLLRIIYFSLITLLLVACGTGLSPTAQPEATPSPTSEAPLLSPTAALRLPDTDLARLAGEIKIDGSSTVFPITERVAVA FGDLAPDVTIRLGVSGTGGGFTRFCAGETDISNASRPIKQKEIDACAASGITFIELPVAFDGLSVVVHPQNTWVDCLTVA ELNLMWAPEATNRITRWNQIRAEWPAEPLHLYGAGVDSGTYDYFTSAIVGAEGVSRSDYTASEDDYLLAQDVAADRLGLG FFGYAYYAEYADQLRAVAIDNGQGCVAPTVKTIVDGSYQPLSRPIFIYVRADSLNRPEIAAFVRFYVQNGAMFAEQALYV PLPETVYQLALQRVERRITGSVFSGGSQVGLSIEQLLQLEDR >Mature_362_residues MRLLRIIYFSLITLLLVACGTGLSPTAQPEATPSPTSEAPLLSPTAALRLPDTDLARLAGEIKIDGSSTVFPITERVAVA FGDLAPDVTIRLGVSGTGGGFTRFCAGETDISNASRPIKQKEIDACAASGITFIELPVAFDGLSVVVHPQNTWVDCLTVA ELNLMWAPEATNRITRWNQIRAEWPAEPLHLYGAGVDSGTYDYFTSAIVGAEGVSRSDYTASEDDYLLAQDVAADRLGLG FFGYAYYAEYADQLRAVAIDNGQGCVAPTVKTIVDGSYQPLSRPIFIYVRADSLNRPEIAAFVRFYVQNGAMFAEQALYV PLPETVYQLALQRVERRITGSVFSGGSQVGLSIEQLLQLEDR
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39134; Mature: 39134
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLRIIYFSLITLLLVACGTGLSPTAQPEATPSPTSEAPLLSPTAALRLPDTDLARLAG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCC EIKIDGSSTVFPITERVAVAFGDLAPDVTIRLGVSGTGGGFTRFCAGETDISNASRPIKQ EEEECCCCEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCHH KEIDACAASGITFIELPVAFDGLSVVVHPQNTWVDCLTVAELNLMWAPEATNRITRWNQI HHHHHHHHCCCEEEEEEEEECCEEEEECCCCCCCHHEEEEEEEEEECCCHHHHHHHHHHH RAEWPAEPLHLYGAGVDSGTYDYFTSAIVGAEGVSRSDYTASEDDYLLAQDVAADRLGLG HCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCH FFGYAYYAEYADQLRAVAIDNGQGCVAPTVKTIVDGSYQPLSRPIFIYVRADSLNRPEIA HHHHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHH AFVRFYVQNGAMFAEQALYVPLPETVYQLALQRVERRITGSVFSGGSQVGLSIEQLLQLE HHHHHHHHCCCHHHHCEEECCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHC DR CC >Mature Secondary Structure MRLLRIIYFSLITLLLVACGTGLSPTAQPEATPSPTSEAPLLSPTAALRLPDTDLARLAG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCC EIKIDGSSTVFPITERVAVAFGDLAPDVTIRLGVSGTGGGFTRFCAGETDISNASRPIKQ EEEECCCCEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCHH KEIDACAASGITFIELPVAFDGLSVVVHPQNTWVDCLTVAELNLMWAPEATNRITRWNQI HHHHHHHHCCCEEEEEEEEECCEEEEECCCCCCCHHEEEEEEEEEECCCHHHHHHHHHHH RAEWPAEPLHLYGAGVDSGTYDYFTSAIVGAEGVSRSDYTASEDDYLLAQDVAADRLGLG HCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCH FFGYAYYAEYADQLRAVAIDNGQGCVAPTVKTIVDGSYQPLSRPIFIYVRADSLNRPEIA HHHHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHH AFVRFYVQNGAMFAEQALYVPLPETVYQLALQRVERRITGSVFSGGSQVGLSIEQLLQLE HHHHHHHHCCCHHHHCEEECCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHC DR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]