| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527073
Identifier: 222527073
GI number: 222527073
Start: 4796666
End: 4797637
Strand: Direct
Name: 222527073
Synonym: Chy400_3852
Alternate gene names: NA
Gene position: 4796666-4797637 (Clockwise)
Preceding gene: 222527072
Following gene: 222527074
Centisome position: 91.04
GC content: 59.98
Gene sequence:
>972_bases ATGATTACAACCATCACGACCAGCCGGGAACAGTGGACTCCCGATACGGCACTGGCCGGCTTTGAAACGAGGTCGATCAA TCTGCGCAGTGGCCGGGCAGTGTTGATCCGCCAGATCAACCCGCCAAACCAGGGCCGAGCCGTGCTGTACGTTCACGGCT ACTCCGACTACTTTTTCCAGGCCCATCTGGCCGATGTGTTCCGTGCCCACGGCTACGCATTCTACGCCATTGATCTACCC GGCCACGGTCGTGCAATTGAAACTGGTCAGATTCCCTGTTTCTACCGCGACATCACCGAATTTTACCCGTTCCTCGACGC CGCGATAAACCTGATCGATGCCGAACAGCAGCAACCCTGGCTGGTATTGCACGGCCATTCGGCAGGAGGACTGATCACTG CCCTGTACGCCGCCGAAGGTCAGCAGCGTGAACGGATCGGCGCCCTGGTGCTCAATAGTCCATTCTTCGACTTTTTTATT GATCGGGTGACCCGGGCATCGATCCCGTTGGTGATGTGGCTTGGGCGTATCCAACCAACGCGCGTCGTCGGCAAGCTCTC CCCGGTGTATGGCGAGAGCATCTATCGCGGCGCCGGTGGCGAATGGGAGTTCGATCAACGCTGGAAACCGGTGCAGGGAA TTCCTATGCGAGCCGGCACAGCCCGGGCCGTCCTGCTGGCTCAACGCCGCTTGCGGCGTGGATTAGGCATTCGCTGCCCG ATTCTGATCGCGCATTCAGCACGCTCGGCCTGGCCCATCGCCGGCAGTCCAGAGGTCGGACGCGCCGATGTGGTTCTCGA CGTGGCCCATATGCGTCGTGATGGCCCAAGCCTGGGGGATGATGTGACCATGATCGCAATTGATGGTGGACTGCACGATC TGGCCCTCTCTCCTCCACCTGTCCGCGAACACTACTTTCGTGAGATGATGGCCTGGCTGGCAGAGGTAGCGGCGCGTCAA CCGGTAACGTAA
Upstream 100 bases:
>100_bases GTCACGGTGGGATTCTGGATCGCATCGATAGCATCCTCTTCACCGGGCCGGTTGTCTACTACATGATCGTATTGTTTACA AGGTAAGGCAGGAACGGGTC
Downstream 100 bases:
>100_bases AGCAGAGGGTACTTCATGCGGCAGTGGCTCATCGCGTTCACGATTATCCTGACCAGCCTGTTGCCATTTCCAGCCTATCC ACTGCCGCCAGAGTTTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Lysophospholipase; Alpha/Beta Hydrolase Fold Family Protein; Hydrolase; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein; Carboxylic Ester Hydrolase
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MITTITTSREQWTPDTALAGFETRSINLRSGRAVLIRQINPPNQGRAVLYVHGYSDYFFQAHLADVFRAHGYAFYAIDLP GHGRAIETGQIPCFYRDITEFYPFLDAAINLIDAEQQQPWLVLHGHSAGGLITALYAAEGQQRERIGALVLNSPFFDFFI DRVTRASIPLVMWLGRIQPTRVVGKLSPVYGESIYRGAGGEWEFDQRWKPVQGIPMRAGTARAVLLAQRRLRRGLGIRCP ILIAHSARSAWPIAGSPEVGRADVVLDVAHMRRDGPSLGDDVTMIAIDGGLHDLALSPPPVREHYFREMMAWLAEVAARQ PVT
Sequences:
>Translated_323_residues MITTITTSREQWTPDTALAGFETRSINLRSGRAVLIRQINPPNQGRAVLYVHGYSDYFFQAHLADVFRAHGYAFYAIDLP GHGRAIETGQIPCFYRDITEFYPFLDAAINLIDAEQQQPWLVLHGHSAGGLITALYAAEGQQRERIGALVLNSPFFDFFI DRVTRASIPLVMWLGRIQPTRVVGKLSPVYGESIYRGAGGEWEFDQRWKPVQGIPMRAGTARAVLLAQRRLRRGLGIRCP ILIAHSARSAWPIAGSPEVGRADVVLDVAHMRRDGPSLGDDVTMIAIDGGLHDLALSPPPVREHYFREMMAWLAEVAARQ PVT >Mature_323_residues MITTITTSREQWTPDTALAGFETRSINLRSGRAVLIRQINPPNQGRAVLYVHGYSDYFFQAHLADVFRAHGYAFYAIDLP GHGRAIETGQIPCFYRDITEFYPFLDAAINLIDAEQQQPWLVLHGHSAGGLITALYAAEGQQRERIGALVLNSPFFDFFI DRVTRASIPLVMWLGRIQPTRVVGKLSPVYGESIYRGAGGEWEFDQRWKPVQGIPMRAGTARAVLLAQRRLRRGLGIRCP ILIAHSARSAWPIAGSPEVGRADVVLDVAHMRRDGPSLGDDVTMIAIDGGLHDLALSPPPVREHYFREMMAWLAEVAARQ PVT
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35983; Mature: 35983
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITTITTSREQWTPDTALAGFETRSINLRSGRAVLIRQINPPNQGRAVLYVHGYSDYFFQ CEEEEECCCCCCCCCHHHCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCHHHH AHLADVFRAHGYAFYAIDLPGHGRAIETGQIPCFYRDITEFYPFLDAAINLIDAEQQQPW HHHHHHHHHCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE LVLHGHSAGGLITALYAAEGQQRERIGALVLNSPFFDFFIDRVTRASIPLVMWLGRIQPT EEEECCCCCCCEEEEEHHCCCHHHHHCEEEECCCHHHHHHHHHHHCCCCHHHHHCCCCHH RVVGKLSPVYGESIYRGAGGEWEFDQRWKPVQGIPMRAGTARAVLLAQRRLRRGLGIRCP HHHHCCCCHHCCHHHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE ILIAHSARSAWPIAGSPEVGRADVVLDVAHMRRDGPSLGDDVTMIAIDGGLHDLALSPPP EEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCCEEEEEEECCCEECCCCCCC VREHYFREMMAWLAEVAARQPVT HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MITTITTSREQWTPDTALAGFETRSINLRSGRAVLIRQINPPNQGRAVLYVHGYSDYFFQ CEEEEECCCCCCCCCHHHCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCHHHH AHLADVFRAHGYAFYAIDLPGHGRAIETGQIPCFYRDITEFYPFLDAAINLIDAEQQQPW HHHHHHHHHCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE LVLHGHSAGGLITALYAAEGQQRERIGALVLNSPFFDFFIDRVTRASIPLVMWLGRIQPT EEEECCCCCCCEEEEEHHCCCHHHHHCEEEECCCHHHHHHHHHHHCCCCHHHHHCCCCHH RVVGKLSPVYGESIYRGAGGEWEFDQRWKPVQGIPMRAGTARAVLLAQRRLRRGLGIRCP HHHHCCCCHHCCHHHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE ILIAHSARSAWPIAGSPEVGRADVVLDVAHMRRDGPSLGDDVTMIAIDGGLHDLALSPPP EEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCCEEEEEEECCCEECCCCCCC VREHYFREMMAWLAEVAARQPVT HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA