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The map label for this gene is sufB [C]

Identifier: 222526976

GI number: 222526976

Start: 4675734

End: 4677149

Strand: Direct

Name: sufB [C]

Synonym: Chy400_3754

Alternate gene names: 222526976

Gene position: 4675734-4677149 (Clockwise)

Preceding gene: 222526975

Following gene: 222526977

Centisome position: 88.74

GC content: 57.49

Gene sequence:

>1416_bases
GTGGTTGCTGAAGCAGTCAATTTGCAATTCGATTACTCGCGCTATGGTTTCCGTCAGGAAGAGCGCTATGTCTATAAAGC
ACCGAAAGGTCTCAACGAGCGGATCGTGCGCGAACTCTCCGGGATGAAGGGTGAACCGGAGTGGATGCTCAAGCGCCGTC
TGCGCGCACTCGAGATCTTCAACAAGAAGCCTACACCTCTGGTGGGCACCTGGGCCAATCCTGAACTGGCCGAACTGAAC
TACGACGATATTCACTACTTCGTCCGCGCCAACGAGCGTCCACAGACCGACTGGGATGCCGTGCCGCCGGAGATCAAGAA
CACCTTCGAGCGTCTGGGTATTCCCGAAGCCGAGCGGAAGTTCCTGGCCGGTGTCGGTGCCCAGTATGAGTCGGAAGTGG
TCTATCACTCGCTGCGTGAGGAGTGGGCAAAGCAGGGTGTGATCTTCCTCGATACCGACACAGCCCTGAAAGAGTACCCC
GAATTCTTCAAAGAGTACTTCGGGACGATTGTGCCGGCGGCAGACAACAAGTATGCTGCGCTCAATACTGCGGTCTGGTC
GGGTGGCTCGTTCGTCTACGTGCCAAAGGGAGTGAAGGTTGATATTCCGCTCCAGGCCTATTTCCGCATCAACGCCGAGC
GCATGGGGCAGTTCGAGCGAACGCTGATCATTATCGATGAGGGAGCCGAGGCGCACTACATTGAGGGTTGTACAGCACCG
ATCTACAGCACCAACTCGCTCCACTCGGCAGTGGTCGAGGTGATTGTGAAGAAAGGTGGCAAGTTCCGCTACACCACGAT
TCAGAACTGGGCCAACAACATCTTCAATCTGGTCACCAAGCGAGCGGTGGCCTACGAAGAGGCCAGCATGGAGTGGGTGG
ACGGTAATATCGGCTCGAAGCTGACCATGAAGTACCCGTCGGTTTACCTGATGGGACGCAAGGCACGCGGCGAGGTGCTC
TCGGTAGCGTATGCCGGACGTGGTCAGCATCAGGACGCCGGTGCCAAGATGATACACCTGGCCCCGGAAACCACCTCACG
CATTACCAACAAGTCGGTGAGCAAGGATGGTGGTAAGACAACCTACCGTGGGCTGGCGAAGGTGGCACCCGGCGCTTACG
GCGCGAAGATCAACGTCAACTGTGACGCGCTGATCCTGGACGAGCATTCAGCCTCGGATACGATTCCGTATATCGAGATT
GAAGAGGATCGCTGCACGCTGGCCCACGAGGCAACCGTTGGTCGGATCGGTGCCGAACAGCTCTTCTACCTGATGAGCCG
CGGTATCTCCGAGTCGGATGCCCTCTCGATGATCGTGCTCGGCTTCATGGAGCCATTCACCCGCGAACTGCCGATGGAGT
ACGCGGTTGAGCTGAACCGCCTGATCCAGCTCGAAATGGAAGGGTCGGTCGGCTAA

Upstream 100 bases:

>100_bases
ATGCGCCTTGCTTTCGCTGAAAGCCTTAAAGGCCGGCCTCTACGGGGTGAGCCAGATGGATGAAGATATGTAGTCAGATA
CCTGGAAAAGGAGTAGCACC

Downstream 100 bases:

>100_bases
TTGACTGGGTGAGATGAGTGGAGAAGAGCGCTCCCCTTCATCGGGAGCGCTCAGATTGTTTCGCGAACATTCAATTATGT
CAACTCAAGTTGACACCTAT

Product: FeS assembly protein SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MVAEAVNLQFDYSRYGFRQEERYVYKAPKGLNERIVRELSGMKGEPEWMLKRRLRALEIFNKKPTPLVGTWANPELAELN
YDDIHYFVRANERPQTDWDAVPPEIKNTFERLGIPEAERKFLAGVGAQYESEVVYHSLREEWAKQGVIFLDTDTALKEYP
EFFKEYFGTIVPAADNKYAALNTAVWSGGSFVYVPKGVKVDIPLQAYFRINAERMGQFERTLIIIDEGAEAHYIEGCTAP
IYSTNSLHSAVVEVIVKKGGKFRYTTIQNWANNIFNLVTKRAVAYEEASMEWVDGNIGSKLTMKYPSVYLMGRKARGEVL
SVAYAGRGQHQDAGAKMIHLAPETTSRITNKSVSKDGGKTTYRGLAKVAPGAYGAKINVNCDALILDEHSASDTIPYIEI
EEDRCTLAHEATVGRIGAEQLFYLMSRGISESDALSMIVLGFMEPFTRELPMEYAVELNRLIQLEMEGSVG

Sequences:

>Translated_471_residues
MVAEAVNLQFDYSRYGFRQEERYVYKAPKGLNERIVRELSGMKGEPEWMLKRRLRALEIFNKKPTPLVGTWANPELAELN
YDDIHYFVRANERPQTDWDAVPPEIKNTFERLGIPEAERKFLAGVGAQYESEVVYHSLREEWAKQGVIFLDTDTALKEYP
EFFKEYFGTIVPAADNKYAALNTAVWSGGSFVYVPKGVKVDIPLQAYFRINAERMGQFERTLIIIDEGAEAHYIEGCTAP
IYSTNSLHSAVVEVIVKKGGKFRYTTIQNWANNIFNLVTKRAVAYEEASMEWVDGNIGSKLTMKYPSVYLMGRKARGEVL
SVAYAGRGQHQDAGAKMIHLAPETTSRITNKSVSKDGGKTTYRGLAKVAPGAYGAKINVNCDALILDEHSASDTIPYIEI
EEDRCTLAHEATVGRIGAEQLFYLMSRGISESDALSMIVLGFMEPFTRELPMEYAVELNRLIQLEMEGSVG
>Mature_471_residues
MVAEAVNLQFDYSRYGFRQEERYVYKAPKGLNERIVRELSGMKGEPEWMLKRRLRALEIFNKKPTPLVGTWANPELAELN
YDDIHYFVRANERPQTDWDAVPPEIKNTFERLGIPEAERKFLAGVGAQYESEVVYHSLREEWAKQGVIFLDTDTALKEYP
EFFKEYFGTIVPAADNKYAALNTAVWSGGSFVYVPKGVKVDIPLQAYFRINAERMGQFERTLIIIDEGAEAHYIEGCTAP
IYSTNSLHSAVVEVIVKKGGKFRYTTIQNWANNIFNLVTKRAVAYEEASMEWVDGNIGSKLTMKYPSVYLMGRKARGEVL
SVAYAGRGQHQDAGAKMIHLAPETTSRITNKSVSKDGGKTTYRGLAKVAPGAYGAKINVNCDALILDEHSASDTIPYIEI
EEDRCTLAHEATVGRIGAEQLFYLMSRGISESDALSMIVLGFMEPFTRELPMEYAVELNRLIQLEMEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=464, Percent_Identity=42.4568965517241, Blast_Score=371, Evalue=1e-104,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=31.1688311688312, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53064; Mature: 53064

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAEAVNLQFDYSRYGFRQEERYVYKAPKGLNERIVRELSGMKGEPEWMLKRRLRALEIF
CCCCEEEEEEEHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NKKPTPLVGTWANPELAELNYDDIHYFVRANERPQTDWDAVPPEIKNTFERLGIPEAERK
CCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHH
FLAGVGAQYESEVVYHSLREEWAKQGVIFLDTDTALKEYPEFFKEYFGTIVPAADNKYAA
HHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCEEECCCCCCEEE
LNTAVWSGGSFVYVPKGVKVDIPLQAYFRINAERMGQFERTLIIIDEGAEAHYIEGCTAP
EEEEEECCCCEEEECCCCEEECCCCEEEEECHHHCCCCEEEEEEEECCCCEEEECCCCCC
IYSTNSLHSAVVEVIVKKGGKFRYTTIQNWANNIFNLVTKRAVAYEEASMEWVDGNIGSK
CCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCE
LTMKYPSVYLMGRKARGEVLSVAYAGRGQHQDAGAKMIHLAPETTSRITNKSVSKDGGKT
EEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCH
TYRGLAKVAPGAYGAKINVNCDALILDEHSASDTIPYIEIEEDRCTLAHEATVGRIGAEQ
HHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCCCEEEECCCCEEEEHHCHHHHCCHHH
LFYLMSRGISESDALSMIVLGFMEPFTRELPMEYAVELNRLIQLEMEGSVG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure
MVAEAVNLQFDYSRYGFRQEERYVYKAPKGLNERIVRELSGMKGEPEWMLKRRLRALEIF
CCCCEEEEEEEHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NKKPTPLVGTWANPELAELNYDDIHYFVRANERPQTDWDAVPPEIKNTFERLGIPEAERK
CCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHH
FLAGVGAQYESEVVYHSLREEWAKQGVIFLDTDTALKEYPEFFKEYFGTIVPAADNKYAA
HHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCEEECCCCCCEEE
LNTAVWSGGSFVYVPKGVKVDIPLQAYFRINAERMGQFERTLIIIDEGAEAHYIEGCTAP
EEEEEECCCCEEEECCCCEEECCCCEEEEECHHHCCCCEEEEEEEECCCCEEEECCCCCC
IYSTNSLHSAVVEVIVKKGGKFRYTTIQNWANNIFNLVTKRAVAYEEASMEWVDGNIGSK
CCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCE
LTMKYPSVYLMGRKARGEVLSVAYAGRGQHQDAGAKMIHLAPETTSRITNKSVSKDGGKT
EEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCH
TYRGLAKVAPGAYGAKINVNCDALILDEHSASDTIPYIEIEEDRCTLAHEATVGRIGAEQ
HHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCCCEEEECCCCEEEEHHCHHHHCCHHH
LFYLMSRGISESDALSMIVLGFMEPFTRELPMEYAVELNRLIQLEMEGSVG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA