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The map label for this gene is 222526971

Identifier: 222526971

GI number: 222526971

Start: 4671221

End: 4671898

Strand: Direct

Name: 222526971

Synonym: Chy400_3749

Alternate gene names: NA

Gene position: 4671221-4671898 (Clockwise)

Preceding gene: 222526969

Following gene: 222526972

Centisome position: 88.66

GC content: 56.34

Gene sequence:

>678_bases
ATGGATACCACACGTTACCCGTCCGACAGTCCAGCCGGCATCATCTTACGCTACTTACAGCGTCATGCCAGGGCCACAGT
AAAAGAACTTGCTGATTTGATCGGTGTCAGTACGACAGCCGTTCGCGATCATCTTGTGCATTTACAGGCCGAAGGCATGG
TCGAGGTTACCAGTGAGCGAAGTGGGCCGGGTCGTCCGCGATTGGTGTATAGCTTGTCTGAAAAGGCTCAAAAATCCTTC
CCCAAGCAGTATGATCGGCTCATCAGCACCTTGCTGCGCGAGCTGATCGAGCTGGAAGGGGAGGGCAAGGTCGAGCAGTT
GCTTGATCGGGTCAGCCAGCGCCTGGCGAGTGAGTATGCCGACCGTATGGCAGGCTCAGATGTAGCTGCACGCCTGAATG
AGCTGCGGGCATTACTTGAACAGCGTGGCGTGCCGGCGGAAATTGATCCGGAAGGCGATGTGTTACGCCTGTTCGCCTGC
CCGTACTACGATGTGGCAGCCGATTATCCCGAGGTCTGTTCAATGGAGCGGCGGATGATCGAGTATGTCCTGGGCGAGAA
GCTGGTGCTCGAAGATACGATTCGAGCCGGAGCGCATAATTGCCGCTTCGTCCTGCGTCCACAAGATATTCCGCTGACCA
TGACACCTCCGGCTGCTGATCCGACGACTGAGGTATAA

Upstream 100 bases:

>100_bases
ACAATTACACATCTGAAATAAAAAAGGTTTTTGGTTTTTTTATTGACAATAGACTGAAATGCTGGTAGACTGTACAGTAG
TAGTTCGGAGTAGTGCGACT

Downstream 100 bases:

>100_bases
GCCTGTTGTAGTAAATCTGTATCGAGGAGTCCATGAGCAACGATCTGATCATCAAAGATCTCTACGCCCGGATTGGCGAC
AAAGAGATTCTGCGCGGTGT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TrmB; Transcriptional Regulatory Protein; DeoR Family Transcriptional Regulator; Regulatory Protein ArsR; ArsR Family Transcriptional Regulator; Helix-Turn-Helix Type; Sugar-Specific Transcriptional Regulator TrmB; MarR Family Transcriptional Regulator; Transcriptional Regulator DeoR Family; Iron-Sulfur Cluster Biosynthesis Transcriptional Regulator

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MDTTRYPSDSPAGIILRYLQRHARATVKELADLIGVSTTAVRDHLVHLQAEGMVEVTSERSGPGRPRLVYSLSEKAQKSF
PKQYDRLISTLLRELIELEGEGKVEQLLDRVSQRLASEYADRMAGSDVAARLNELRALLEQRGVPAEIDPEGDVLRLFAC
PYYDVAADYPEVCSMERRMIEYVLGEKLVLEDTIRAGAHNCRFVLRPQDIPLTMTPPAADPTTEV

Sequences:

>Translated_225_residues
MDTTRYPSDSPAGIILRYLQRHARATVKELADLIGVSTTAVRDHLVHLQAEGMVEVTSERSGPGRPRLVYSLSEKAQKSF
PKQYDRLISTLLRELIELEGEGKVEQLLDRVSQRLASEYADRMAGSDVAARLNELRALLEQRGVPAEIDPEGDVLRLFAC
PYYDVAADYPEVCSMERRMIEYVLGEKLVLEDTIRAGAHNCRFVLRPQDIPLTMTPPAADPTTEV
>Mature_225_residues
MDTTRYPSDSPAGIILRYLQRHARATVKELADLIGVSTTAVRDHLVHLQAEGMVEVTSERSGPGRPRLVYSLSEKAQKSF
PKQYDRLISTLLRELIELEGEGKVEQLLDRVSQRLASEYADRMAGSDVAARLNELRALLEQRGVPAEIDPEGDVLRLFAC
PYYDVAADYPEVCSMERRMIEYVLGEKLVLEDTIRAGAHNCRFVLRPQDIPLTMTPPAADPTTEV

Specific function: Unknown

COG id: COG2345

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25210; Mature: 25210

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTTRYPSDSPAGIILRYLQRHARATVKELADLIGVSTTAVRDHLVHLQAEGMVEVTSER
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCC
SGPGRPRLVYSLSEKAQKSFPKQYDRLISTLLRELIELEGEGKVEQLLDRVSQRLASEYA
CCCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
DRMAGSDVAARLNELRALLEQRGVPAEIDPEGDVLRLFACPYYDVAADYPEVCSMERRMI
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHH
EYVLGEKLVLEDTIRAGAHNCRFVLRPQDIPLTMTPPAADPTTEV
HHHHCCHHHHHHHHHHCCCCCEEEECCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MDTTRYPSDSPAGIILRYLQRHARATVKELADLIGVSTTAVRDHLVHLQAEGMVEVTSER
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCC
SGPGRPRLVYSLSEKAQKSFPKQYDRLISTLLRELIELEGEGKVEQLLDRVSQRLASEYA
CCCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
DRMAGSDVAARLNELRALLEQRGVPAEIDPEGDVLRLFACPYYDVAADYPEVCSMERRMI
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHH
EYVLGEKLVLEDTIRAGAHNCRFVLRPQDIPLTMTPPAADPTTEV
HHHHCCHHHHHHHHHHCCCCCEEEECCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA