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The map label for this gene is tolB [H]

Identifier: 222526875

GI number: 222526875

Start: 4550314

End: 4551579

Strand: Direct

Name: tolB [H]

Synonym: Chy400_3652

Alternate gene names: 222526875

Gene position: 4550314-4551579 (Clockwise)

Preceding gene: 222526873

Following gene: 222526877

Centisome position: 86.36

GC content: 56.08

Gene sequence:

>1266_bases
ATGGCCGCTCGTCGCATTTTGCTGACGATTATCGGGCTGTTGAGTGTGGTGATCCTGATAGGGAGTTTGAGCGCCGGGGT
GGTTGCTTTTCTGCTCATAACCAATCGCCCTGTCGATCAGAAGTTACTGGTACTGGGGCCAAACCGCCGTCTCGCTATTG
TTGATCGCCAGGGTGTGGCTCAGGTACTGGCCGAGGATGCCAGCCCCGAATTGTTTCGCTATCCTGCGCTGGCCCCTGAT
GGAAGCCGGGTGGCGTATATCAGTCAACAGGGGAATACGAGCGTTCTCCGCGTCATACATTTGCAGAGTGGTACACGGAC
TGAGTTGTATCGCTCAACGACCAATCCACCACTCTACATGGTCTGGTCTCCCGATGGTCGGTATCTGTCGTTTCTCTCGA
ATCGTGGTGTCGGTGGTTTGGGGGTGCATATTGTGCCGTCCGATGGTTCCAGAGATGCGGAGTTGATCAGTGTTTCACCC
AGTTCGCTCTACGTCGCCTGGCAGCCCAATAGCTCTTCGTTGCTGGTTCATATCGGTGGCTCGATATTTGAAGATGGCCG
TGTGATTACGGTGCAGCCCGGTCGGCAGCAGCCACTACACGAGGTGACCGACCCAGGTTTCTTCCAAGTGCCGGCCTGGA
GTGTTGATGGCGAGAGTTTTTTCTATGTCGCTCAACCACCGATTGAGGGGCCACCAACGGTGGATAAGGTTGAGAGTGTG
TTGACGCGGGTGAAGGTTGGTGAGATGCAGCCACAGGTGTTGGCCCGTGAACCGATGGCGGCAATTATCTTCGGTCGTTC
ACCACAAAGCGATGAGATTGCGTATACGACGGTCGGTCCCGATGGTTTCGGTCCTTTGAAGCTGGTGGCATTGGATGGTT
CGGTACGCACGCTTTCGGCAGCCGATGATGATGTGGTGGCCTTTTTCTGGTCGCCTGACGGTCAGCAGATCGCCTACCTC
ACGCCAGCCGGTCGTTCGGACAGTGGCTTGACCCAGTTACGCTGGCAGTTGGTCGGACGGGAAGGGAATAATCCGCGCAC
GCTGACCACCTTTACCCCCAGTCAGGAGTTTCTCGCTCAGATCAATTTTTTCGATGCCTATGCCCTGTCGTTCGATCTCT
GGTCGAGCGATGGTCATGCCCTGGTGTATGGCACGAATGATGGTGTGTATGTGTTCGATATTCGGCGCGGAACCGCTGTG
CGGCGGAGTGATGGTGTGCTGGGGATGTGGATTGGGGGGAGGGAGGAAGTGGGAGATAGGAGATAG

Upstream 100 bases:

>100_bases
ACTTCCTTCTTTTGTACAGTAAATGATCACTTCTCCTGCGCGATACCTCAAATCTTGCTATACTACATAACACATAGATC
GCGTTGGAAAGGAGCCGGGC

Downstream 100 bases:

>100_bases
AAGATAGGAGATAGAAGGTGGGGAGGAGAGAGGAGATAGGAGATAGAAGATAGGAGATAGAAGATAGGAGATAGAAGATA
GGAGATAGAAGATAGGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MAARRILLTIIGLLSVVILIGSLSAGVVAFLLITNRPVDQKLLVLGPNRRLAIVDRQGVAQVLAEDASPELFRYPALAPD
GSRVAYISQQGNTSVLRVIHLQSGTRTELYRSTTNPPLYMVWSPDGRYLSFLSNRGVGGLGVHIVPSDGSRDAELISVSP
SSLYVAWQPNSSSLLVHIGGSIFEDGRVITVQPGRQQPLHEVTDPGFFQVPAWSVDGESFFYVAQPPIEGPPTVDKVESV
LTRVKVGEMQPQVLAREPMAAIIFGRSPQSDEIAYTTVGPDGFGPLKLVALDGSVRTLSAADDDVVAFFWSPDGQQIAYL
TPAGRSDSGLTQLRWQLVGREGNNPRTLTTFTPSQEFLAQINFFDAYALSFDLWSSDGHALVYGTNDGVYVFDIRRGTAV
RRSDGVLGMWIGGREEVGDRR

Sequences:

>Translated_421_residues
MAARRILLTIIGLLSVVILIGSLSAGVVAFLLITNRPVDQKLLVLGPNRRLAIVDRQGVAQVLAEDASPELFRYPALAPD
GSRVAYISQQGNTSVLRVIHLQSGTRTELYRSTTNPPLYMVWSPDGRYLSFLSNRGVGGLGVHIVPSDGSRDAELISVSP
SSLYVAWQPNSSSLLVHIGGSIFEDGRVITVQPGRQQPLHEVTDPGFFQVPAWSVDGESFFYVAQPPIEGPPTVDKVESV
LTRVKVGEMQPQVLAREPMAAIIFGRSPQSDEIAYTTVGPDGFGPLKLVALDGSVRTLSAADDDVVAFFWSPDGQQIAYL
TPAGRSDSGLTQLRWQLVGREGNNPRTLTTFTPSQEFLAQINFFDAYALSFDLWSSDGHALVYGTNDGVYVFDIRRGTAV
RRSDGVLGMWIGGREEVGDRR
>Mature_420_residues
AARRILLTIIGLLSVVILIGSLSAGVVAFLLITNRPVDQKLLVLGPNRRLAIVDRQGVAQVLAEDASPELFRYPALAPDG
SRVAYISQQGNTSVLRVIHLQSGTRTELYRSTTNPPLYMVWSPDGRYLSFLSNRGVGGLGVHIVPSDGSRDAELISVSPS
SLYVAWQPNSSSLLVHIGGSIFEDGRVITVQPGRQQPLHEVTDPGFFQVPAWSVDGESFFYVAQPPIEGPPTVDKVESVL
TRVKVGEMQPQVLAREPMAAIIFGRSPQSDEIAYTTVGPDGFGPLKLVALDGSVRTLSAADDDVVAFFWSPDGQQIAYLT
PAGRSDSGLTQLRWQLVGREGNNPRTLTTFTPSQEFLAQINFFDAYALSFDLWSSDGHALVYGTNDGVYVFDIRRGTAVR
RSDGVLGMWIGGREEVGDRR

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 45770; Mature: 45639

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARRILLTIIGLLSVVILIGSLSAGVVAFLLITNRPVDQKLLVLGPNRRLAIVDRQGVA
CCCHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCCCCCCEEEEECCCCEEEEEECCCHH
QVLAEDASPELFRYPALAPDGSRVAYISQQGNTSVLRVIHLQSGTRTELYRSTTNPPLYM
HHHHCCCCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCEEEECCCCCCEEE
VWSPDGRYLSFLSNRGVGGLGVHIVPSDGSRDAELISVSPSSLYVAWQPNSSSLLVHIGG
EECCCCCEEEHHHCCCCCCEEEEEEECCCCCCCEEEEECCCEEEEEECCCCCEEEEEECC
SIFEDGRVITVQPGRQQPLHEVTDPGFFQVPAWSVDGESFFYVAQPPIEGPPTVDKVESV
CEECCCEEEEECCCCCCCHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHH
LTRVKVGEMQPQVLAREPMAAIIFGRSPQSDEIAYTTVGPDGFGPLKLVALDGSVRTLSA
HHHHHCCCCCCHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEEEC
ADDDVVAFFWSPDGQQIAYLTPAGRSDSGLTQLRWQLVGREGNNPRTLTTFTPSQEFLAQ
CCCCEEEEEECCCCCEEEEEECCCCCCCCHHEEEEEEECCCCCCCEEEEEECCCHHHHHE
INFFDAYALSFDLWSSDGHALVYGTNDGVYVFDIRRGTAVRRSDGVLGMWIGGREEVGDR
ECEEEEEEEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEECCCEEEEEECCHHHCCCC
R
C
>Mature Secondary Structure 
AARRILLTIIGLLSVVILIGSLSAGVVAFLLITNRPVDQKLLVLGPNRRLAIVDRQGVA
CCHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCCCCCCEEEEECCCCEEEEEECCCHH
QVLAEDASPELFRYPALAPDGSRVAYISQQGNTSVLRVIHLQSGTRTELYRSTTNPPLYM
HHHHCCCCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCEEEECCCCCCEEE
VWSPDGRYLSFLSNRGVGGLGVHIVPSDGSRDAELISVSPSSLYVAWQPNSSSLLVHIGG
EECCCCCEEEHHHCCCCCCEEEEEEECCCCCCCEEEEECCCEEEEEECCCCCEEEEEECC
SIFEDGRVITVQPGRQQPLHEVTDPGFFQVPAWSVDGESFFYVAQPPIEGPPTVDKVESV
CEECCCEEEEECCCCCCCHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHH
LTRVKVGEMQPQVLAREPMAAIIFGRSPQSDEIAYTTVGPDGFGPLKLVALDGSVRTLSA
HHHHHCCCCCCHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEEEC
ADDDVVAFFWSPDGQQIAYLTPAGRSDSGLTQLRWQLVGREGNNPRTLTTFTPSQEFLAQ
CCCCEEEEEECCCCCEEEEEECCCCCCCCHHEEEEEEECCCCCCCEEEEEECCCHHHHHE
INFFDAYALSFDLWSSDGHALVYGTNDGVYVFDIRRGTAVRRSDGVLGMWIGGREEVGDR
ECEEEEEEEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEECCCEEEEEECCHHHCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA