| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526877
Identifier: 222526877
GI number: 222526877
Start: 4553174
End: 4553590
Strand: Direct
Name: 222526877
Synonym: Chy400_3654
Alternate gene names: NA
Gene position: 4553174-4553590 (Clockwise)
Preceding gene: 222526875
Following gene: 222526878
Centisome position: 86.42
GC content: 54.92
Gene sequence:
>417_bases ATGCCAAACTATTGGTTATTGAAAACGGAACCGACGGTCTACAGTTTTGCCGATCTGGTGCGTGAAGGTCGTACCGTTTG GGATGGGGTGAGCAATAATGTTGCTCTGAAACATATGCGCGAGATGCGCAGCGGTGACGAGGCGCTGATCTACCACACCG GCGATGAACGGCAGGCTGTTGGTCTGGCGCAAGTCGTCAGCGATCCCTATCCCGACCCCAAACAGAGTGATCCGCGTCTG ATCGTGGTTGATGTTGTACCGTTGCGGGCGTTGCCTCATCCGGTTTCACTGAATGATATCAAAGCTGATCCTTTTTTTGC CGATTTTGCCCTGGTGCGCCAGGGGCGACTCTCGGTTGTACCGGTGAGTGCTGCACAGTGGGAGCGTCTTTTGGCGATGG CAGAAGGACGTGGGTGA
Upstream 100 bases:
>100_bases TCAAAATCGTCGTTCACACGTCCCCCTTTCGCGCGGGGTATTATAGCATGAGGTAGTGAGCAGAGTACGCAGGCTATTCC GATTGATGGAGAGGAGATCA
Downstream 100 bases:
>100_bases TAATAACGAACACAAAATTATGGTATACTTCACGATACGAATAGGAAATGTTCCATCCTGATACCTGACCGCTACGCGCA GACGAAACCTGTCGTTACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MPNYWLLKTEPTVYSFADLVREGRTVWDGVSNNVALKHMREMRSGDEALIYHTGDERQAVGLAQVVSDPYPDPKQSDPRL IVVDVVPLRALPHPVSLNDIKADPFFADFALVRQGRLSVVPVSAAQWERLLAMAEGRG
Sequences:
>Translated_138_residues MPNYWLLKTEPTVYSFADLVREGRTVWDGVSNNVALKHMREMRSGDEALIYHTGDERQAVGLAQVVSDPYPDPKQSDPRL IVVDVVPLRALPHPVSLNDIKADPFFADFALVRQGRLSVVPVSAAQWERLLAMAEGRG >Mature_137_residues PNYWLLKTEPTVYSFADLVREGRTVWDGVSNNVALKHMREMRSGDEALIYHTGDERQAVGLAQVVSDPYPDPKQSDPRLI VVDVVPLRALPHPVSLNDIKADPFFADFALVRQGRLSVVPVSAAQWERLLAMAEGRG
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15411; Mature: 15280
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNYWLLKTEPTVYSFADLVREGRTVWDGVSNNVALKHMREMRSGDEALIYHTGDERQAV CCCEEEEECCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHH GLAQVVSDPYPDPKQSDPRLIVVDVVPLRALPHPVSLNDIKADPFFADFALVRQGRLSVV HHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEE PVSAAQWERLLAMAEGRG ECCHHHHHHHHHHHCCCC >Mature Secondary Structure PNYWLLKTEPTVYSFADLVREGRTVWDGVSNNVALKHMREMRSGDEALIYHTGDERQAV CCEEEEECCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHH GLAQVVSDPYPDPKQSDPRLIVVDVVPLRALPHPVSLNDIKADPFFADFALVRQGRLSVV HHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEE PVSAAQWERLLAMAEGRG ECCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA