| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is marR [C]
Identifier: 222526859
GI number: 222526859
Start: 4522630
End: 4523097
Strand: Direct
Name: marR [C]
Synonym: Chy400_3635
Alternate gene names: 222526859
Gene position: 4522630-4523097 (Clockwise)
Preceding gene: 222526858
Following gene: 222526860
Centisome position: 85.84
GC content: 56.62
Gene sequence:
>468_bases ATGTATCACGAACTTGATCCGCCCTACACCGCCGAACAGGTTGCCAAACTCTTCAACCTTGTACACAGTGAACTCATGGG TCAGAGTATGGAGACGCTCCTGCAATTTCTTCAGCGCTCCAATCTCTCGATGCCGCGTCTGGTCTCGCTGATGTACATTC AGCGGCAGCGCGCAACCACTATTTCATCCTTGAGCGAACATCTCAATCTGACTCTCGGTACGACCAGTCAGATGATCGAG CAGCTCGTGCAGGATGGCCTGGTTGAGCGCTCTGAAGCGCCGCATGATCGCCGCCAGAAACTGGTTTCCCTTACCGCAAC CGGTGAAGCGATTGTCGCCGAAGCGCGCCAGATTCGATTGCATGAGGCCAGCCGTCATCTCAGCCGGTTGCCACCTGCAT TGCTCGCGCAGTTGGGACAGGCGCTGCACGCCGCCTGTCGCGAGTGGAATCTTGTGACTACCACGTAG
Upstream 100 bases:
>100_bases TCTTACCTTCCTTTGCGCCATCTATACCCCTTGACAGAACCACAAAACGGTTATACACTTCAAATAGTTTGAAAAACAAA ACTATTTGGAGATTCAAATC
Downstream 100 bases:
>100_bases GCTTGCCGACTTACCACGCTTTGGTACGTGTTACCCCCAACGTGCCTGCGCGTGTGGGGGCGGCTCTGCCTGTGCCCGAT TTTGACTTGTTATGACGACG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein MarR
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MYHELDPPYTAEQVAKLFNLVHSELMGQSMETLLQFLQRSNLSMPRLVSLMYIQRQRATTISSLSEHLNLTLGTTSQMIE QLVQDGLVERSEAPHDRRQKLVSLTATGEAIVAEARQIRLHEASRHLSRLPPALLAQLGQALHAACREWNLVTTT
Sequences:
>Translated_155_residues MYHELDPPYTAEQVAKLFNLVHSELMGQSMETLLQFLQRSNLSMPRLVSLMYIQRQRATTISSLSEHLNLTLGTTSQMIE QLVQDGLVERSEAPHDRRQKLVSLTATGEAIVAEARQIRLHEASRHLSRLPPALLAQLGQALHAACREWNLVTTT >Mature_155_residues MYHELDPPYTAEQVAKLFNLVHSELMGQSMETLLQFLQRSNLSMPRLVSLMYIQRQRATTISSLSEHLNLTLGTTSQMIE QLVQDGLVERSEAPHDRRQKLVSLTATGEAIVAEARQIRLHEASRHLSRLPPALLAQLGQALHAACREWNLVTTT
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17495; Mature: 17495
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHELDPPYTAEQVAKLFNLVHSELMGQSMETLLQFLQRSNLSMPRLVSLMYIQRQRATT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ISSLSEHLNLTLGTTSQMIEQLVQDGLVERSEAPHDRRQKLVSLTATGEAIVAEARQIRL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH HEASRHLSRLPPALLAQLGQALHAACREWNLVTTT HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MYHELDPPYTAEQVAKLFNLVHSELMGQSMETLLQFLQRSNLSMPRLVSLMYIQRQRATT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ISSLSEHLNLTLGTTSQMIEQLVQDGLVERSEAPHDRRQKLVSLTATGEAIVAEARQIRL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH HEASRHLSRLPPALLAQLGQALHAACREWNLVTTT HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA