| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526794
Identifier: 222526794
GI number: 222526794
Start: 4443983
End: 4445350
Strand: Reverse
Name: 222526794
Synonym: Chy400_3568
Alternate gene names: NA
Gene position: 4445350-4443983 (Counterclockwise)
Preceding gene: 222526795
Following gene: 222526793
Centisome position: 84.37
GC content: 57.75
Gene sequence:
>1368_bases ATGCAATGGACTCGTCGCGAATTTCTGATGGGATGTAGCGCTGCAATTGCAGCGATGGCTGCGGCTCGCGTCGGCCAACT GGCCTTCGCCGAGCCGGCCCAACCCCAGGCAACGAATGAGATTTTCGTGCAGATTTTTCTGCGCGGTGGCTGCGATGGGC TGAGTCTGCTCAGTCCATACGATGATCCGCATTATCGGAACGCCCGCGGAACGCTGGCATTACCTTTGAGCGGAGCGAAT GCGCCGTTGCGTATTGATCAGAACAACCCGTCATTCAATACGTCCAGCTTTGGGCTAAACAGCAGAATGCCCCATCTGCG CGATCTGTACAACAGTGGTCACCTTGCGTTCATCCACGCCTGTGGCCTCGATGATGATACGCGCAGCCATTTTGACGCCA TGGACTATATCGAACGCGGGACGCCGGGGAACAAAACAACCAGCAGCGGCTGGCTCACCCGTCATTTACAAAGCCAGGGT GGGGTCAGCACGCTGTTGCCGGCAATCGCTGCCAATAGCGCACCACCTGCTTCGCTGTTGAACTATGCAGGCGCGGTTGC CGTCACCTCACCCAGTAGCTTCAATATCAGCACCGGCTGGCGCTACAACCGCTCCCAAGAGAACTACCCCTTTCTCAGCA CGCTCCGCGAAATCTACAACCGGAGTTCGATTAACCCACTGGCACCGGCTGGCCGCCGGGTTACGCAGGTGATTGATGTG ATGCGGAGCCTGGGCAGCTATACCCCGGCCACTGGTACCACATATCCTTCGGGATCGTTTGGCGATGCCTTGAAGACGGT GGCGCAATTGATCAAAGCTGATCTTGGGCTGCAAGTCGCAACGATTGACTTCGGTGGCTGGGATACGCACGAAGCGCAGG CCAACAGTGACGGAACCGGCTATCTCCCCGACCGGTTAGGCATTCTTTCACAGGGTCTCCATGCCTTCTACAACGACCTC GCTGCCTATCACAGCCGGTTAACCATTGTCGTGCTCAGCGAGTTTGGCCGTCGCCTGGGACGCAATCAGTCGAATGGTAC CGATCACGGTCACGGCAATGTGATGATGGTATTGGGCGGTAACGTGAATGGCCGTCGCATCTACGGTACCTGGCCGGGAT TGCATCCCGATCAGCTCGATAAACGGCAAGACCTGCAAATCACGACCGATTATCGTCAGGTGCTGAGCGAGATTCTGGTG CGTCGGCTCGGTAACCCGAAGCTCGGTACCATCTTCCCCGGCCTGTCGGCATATAATCCACTGGGAATTGTGCGCGGCCC CGATCTGCCACCCGATCTGTCGGCCAACGCTACGCCGACCGACACCGGGTATCAGGTCTTCGTACCGGTGATTCACCAGT GTCGCTAG
Upstream 100 bases:
>100_bases ACGCCGTTAATGACCGGATAGTTGCCATGGTACAGTTACTGGCTACCAGTCCTGAATTCTGGCTGCGATAATCAGCGCCA CACCAGAGGAGAATACACCA
Downstream 100 bases:
>100_bases CCGGTCAATTGTGACTATGAGCAGATGGCTGATCCTTTTCGTGTTGCTATGCAGTGCCTGCGCAGCCCCAACACCGACGG TTGACCTCACGGTTACCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MQWTRREFLMGCSAAIAAMAAARVGQLAFAEPAQPQATNEIFVQIFLRGGCDGLSLLSPYDDPHYRNARGTLALPLSGAN APLRIDQNNPSFNTSSFGLNSRMPHLRDLYNSGHLAFIHACGLDDDTRSHFDAMDYIERGTPGNKTTSSGWLTRHLQSQG GVSTLLPAIAANSAPPASLLNYAGAVAVTSPSSFNISTGWRYNRSQENYPFLSTLREIYNRSSINPLAPAGRRVTQVIDV MRSLGSYTPATGTTYPSGSFGDALKTVAQLIKADLGLQVATIDFGGWDTHEAQANSDGTGYLPDRLGILSQGLHAFYNDL AAYHSRLTIVVLSEFGRRLGRNQSNGTDHGHGNVMMVLGGNVNGRRIYGTWPGLHPDQLDKRQDLQITTDYRQVLSEILV RRLGNPKLGTIFPGLSAYNPLGIVRGPDLPPDLSANATPTDTGYQVFVPVIHQCR
Sequences:
>Translated_455_residues MQWTRREFLMGCSAAIAAMAAARVGQLAFAEPAQPQATNEIFVQIFLRGGCDGLSLLSPYDDPHYRNARGTLALPLSGAN APLRIDQNNPSFNTSSFGLNSRMPHLRDLYNSGHLAFIHACGLDDDTRSHFDAMDYIERGTPGNKTTSSGWLTRHLQSQG GVSTLLPAIAANSAPPASLLNYAGAVAVTSPSSFNISTGWRYNRSQENYPFLSTLREIYNRSSINPLAPAGRRVTQVIDV MRSLGSYTPATGTTYPSGSFGDALKTVAQLIKADLGLQVATIDFGGWDTHEAQANSDGTGYLPDRLGILSQGLHAFYNDL AAYHSRLTIVVLSEFGRRLGRNQSNGTDHGHGNVMMVLGGNVNGRRIYGTWPGLHPDQLDKRQDLQITTDYRQVLSEILV RRLGNPKLGTIFPGLSAYNPLGIVRGPDLPPDLSANATPTDTGYQVFVPVIHQCR >Mature_455_residues MQWTRREFLMGCSAAIAAMAAARVGQLAFAEPAQPQATNEIFVQIFLRGGCDGLSLLSPYDDPHYRNARGTLALPLSGAN APLRIDQNNPSFNTSSFGLNSRMPHLRDLYNSGHLAFIHACGLDDDTRSHFDAMDYIERGTPGNKTTSSGWLTRHLQSQG GVSTLLPAIAANSAPPASLLNYAGAVAVTSPSSFNISTGWRYNRSQENYPFLSTLREIYNRSSINPLAPAGRRVTQVIDV MRSLGSYTPATGTTYPSGSFGDALKTVAQLIKADLGLQVATIDFGGWDTHEAQANSDGTGYLPDRLGILSQGLHAFYNDL AAYHSRLTIVVLSEFGRRLGRNQSNGTDHGHGNVMMVLGGNVNGRRIYGTWPGLHPDQLDKRQDLQITTDYRQVLSEILV RRLGNPKLGTIFPGLSAYNPLGIVRGPDLPPDLSANATPTDTGYQVFVPVIHQCR
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49344; Mature: 49344
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQWTRREFLMGCSAAIAAMAAARVGQLAFAEPAQPQATNEIFVQIFLRGGCDGLSLLSPY CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEHHHHHHCCCCCCCCCCCC DDPHYRNARGTLALPLSGANAPLRIDQNNPSFNTSSFGLNSRMPHLRDLYNSGHLAFIHA CCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEE CGLDDDTRSHFDAMDYIERGTPGNKTTSSGWLTRHLQSQGGVSTLLPAIAANSAPPASLL ECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHH NYAGAVAVTSPSSFNISTGWRYNRSQENYPFLSTLREIYNRSSINPLAPAGRRVTQVIDV HHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH MRSLGSYTPATGTTYPSGSFGDALKTVAQLIKADLGLQVATIDFGGWDTHEAQANSDGTG HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC YLPDRLGILSQGLHAFYNDLAAYHSRLTIVVLSEFGRRLGRNQSNGTDHGHGNVMMVLGG CCHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHCCCCCCCCCCCCCCEEEEECC NVNGRRIYGTWPGLHPDQLDKRQDLQITTDYRQVLSEILVRRLGNPKLGTIFPGLSAYNP CCCCCEEEEECCCCCHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC LGIVRGPDLPPDLSANATPTDTGYQVFVPVIHQCR CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCC >Mature Secondary Structure MQWTRREFLMGCSAAIAAMAAARVGQLAFAEPAQPQATNEIFVQIFLRGGCDGLSLLSPY CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEHHHHHHCCCCCCCCCCCC DDPHYRNARGTLALPLSGANAPLRIDQNNPSFNTSSFGLNSRMPHLRDLYNSGHLAFIHA CCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEE CGLDDDTRSHFDAMDYIERGTPGNKTTSSGWLTRHLQSQGGVSTLLPAIAANSAPPASLL ECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHH NYAGAVAVTSPSSFNISTGWRYNRSQENYPFLSTLREIYNRSSINPLAPAGRRVTQVIDV HHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH MRSLGSYTPATGTTYPSGSFGDALKTVAQLIKADLGLQVATIDFGGWDTHEAQANSDGTG HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC YLPDRLGILSQGLHAFYNDLAAYHSRLTIVVLSEFGRRLGRNQSNGTDHGHGNVMMVLGG CCHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHCCCCCCCCCCCCCCEEEEECC NVNGRRIYGTWPGLHPDQLDKRQDLQITTDYRQVLSEILVRRLGNPKLGTIFPGLSAYNP CCCCCEEEEECCCCCHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC LGIVRGPDLPPDLSANATPTDTGYQVFVPVIHQCR CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA