| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526795
Identifier: 222526795
GI number: 222526795
Start: 4445380
End: 4447179
Strand: Reverse
Name: 222526795
Synonym: Chy400_3569
Alternate gene names: NA
Gene position: 4447179-4445380 (Counterclockwise)
Preceding gene: 222526802
Following gene: 222526794
Centisome position: 84.4
GC content: 56.56
Gene sequence:
>1800_bases ATGGAACTAACTCGACGTGACGTGCTCGAAGGCGGTGTTGCCCTGATTGCCGGGCTAGCCGCTGCCGGACTGGCAGCCGT AGGCACCTCACCTGCACCGGTTGCCGCCTGTTCGTACACTCAGCCGGCTTCGCTACGCACGATTGCGATGCGTCGGCTGG CTTTCGGCCCCAGCCCTGAATTGATGGCGATGTACGATGCCACTCCTGGCGCGAGTGATGAAGAACGGTTCAACAATTGG GTTCGGCAGCAACTGAACTACACTGCAATTGACAACACCCCTTGCGCTAATCGCATTCTGTCCGCCCAGCTCAAGATTCG CTACACCCACAACAGCAGTACCATCAATGAAGTTCGGCCACTAAGCTGGTTATCAGCCTCGCGAGAAACCCTCTGGCAAC AGCGGGTAGTGCCTGATCTGCCCTGGGCGGAGCGCATCCGGCCTTACGAAGAGGTACGAGTGGCGACGTGGCTGCGGGCT GTGTACAGTCGCCGTCAGCTCTTCGAGGTGATGGTTGATTTCTGGCACAACCATTTCAATGTGCGGGCTACTGCCGATCA GCGGATCGCTGCAACCTGGCCCGACTACGACCGCATTATTCGCACGCATGCCCTGGGTAATTTTTACACCATGCTGGTTG AGGTCACCAAAAGCGTTGCCATGATGTACTACCTCAACAACGTGAGTAATAAAGCCGGCGGCGGCGAAGGCGGCAACGAG AATTTTGCCCGTGAACTCTTCGAGTTGCATACACTGGGAAGCGACAACTACCTTAAGTTCTACAGTCAACGCGGCAATAT TCCGGTTGTAGAGTACGGCAGCGAGCGCTATGCATCTGCTTATATTGACTACGATGTCTACGATGCCTCACGCTGCCTGA CCGGCTGGACAATTGCCAATGGCCGTGATGGGCGACCTAATACCGGTGCTTTCTACCTCATGGAGTCCTGGCACGATAAC TATCCCAAGACTGTGCTGGCACCAGCCCCCCTGCCCGGCATCGAACCTGCCCCCAACTTTCCCTTCAACAACGGTGCAGA ACGTGACGGTATGGAAGCTCTACGCCTCGCAGCCCGTCACCCGGGTACAGCCCGCCATCTCTGCACTAAACTGTGCCGAC GGCTGGTAGCCGACAATCCACCGGAGTCACTCATCAACACGGCGTGGAGCGTCTGGATGCAGCATCGTGATTCGCCCGAT CAGATTCGGCGCGTCGTTGAAGCTATTCTGCTTTCCCCAGAGGCAAAAAGTGCCTTTGGTGCCAAGATATGTCGCCCCCT TGAGGCAATGTGGGCATTTTTGCGCGCCACCAACGCTGCCTTGCCCAACGACGTTCCAGCCGTGAACGGCGATGCAACGC AGGGTGGTTATTGGTCAAGTTTGTTCTGGAGCGCGGATCAGACCGGTCATCGCCTCTTCGGCTGGGACACGCCTACCGGC CATCCTGACCGAGCCGATTACTGGGCGAATACGAACGCCTTGCTTAGAACATGGAACATCTTTTACACCATGGCTCAATC CTGGGGTGGTAATGTAACAATTGATATTGTTGGTCAAACGCCGCCTGGCCTCTCATGTGCAGGGATCGTTGACTTTTGGC TCCAGCGCATGCTGACCTACATTCCCACCGGAGATCTCCGTACCCTGCTCATTAACTTTCTGGCACAAGGTGGCGATCCG AACCAGCCACCTCAGCCGCTGCGCGGTGCTCCAGATTGGGGATCAGCGGACGCCGTTAATGACCGGATAGTTGCCATGGT ACAGTTACTGGCTACCAGTCCTGAATTCTGGCTGCGATAA
Upstream 100 bases:
>100_bases GGCTAAAGATAGTACCTTCTGGTGATGGTAGTAGTTTTTTGGTAAAGATTACAATTTTCTCAGGTAGATCGGAAGCAACA ACATATCAGATCAAAAGCAT
Downstream 100 bases:
>100_bases TCAGCGCCACACCAGAGGAGAATACACCAATGCAATGGACTCGTCGCGAATTTCTGATGGGATGTAGCGCTGCAATTGCA GCGATGGCTGCGGCTCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 599; Mature: 599
Protein sequence:
>599_residues MELTRRDVLEGGVALIAGLAAAGLAAVGTSPAPVAACSYTQPASLRTIAMRRLAFGPSPELMAMYDATPGASDEERFNNW VRQQLNYTAIDNTPCANRILSAQLKIRYTHNSSTINEVRPLSWLSASRETLWQQRVVPDLPWAERIRPYEEVRVATWLRA VYSRRQLFEVMVDFWHNHFNVRATADQRIAATWPDYDRIIRTHALGNFYTMLVEVTKSVAMMYYLNNVSNKAGGGEGGNE NFARELFELHTLGSDNYLKFYSQRGNIPVVEYGSERYASAYIDYDVYDASRCLTGWTIANGRDGRPNTGAFYLMESWHDN YPKTVLAPAPLPGIEPAPNFPFNNGAERDGMEALRLAARHPGTARHLCTKLCRRLVADNPPESLINTAWSVWMQHRDSPD QIRRVVEAILLSPEAKSAFGAKICRPLEAMWAFLRATNAALPNDVPAVNGDATQGGYWSSLFWSADQTGHRLFGWDTPTG HPDRADYWANTNALLRTWNIFYTMAQSWGGNVTIDIVGQTPPGLSCAGIVDFWLQRMLTYIPTGDLRTLLINFLAQGGDP NQPPQPLRGAPDWGSADAVNDRIVAMVQLLATSPEFWLR
Sequences:
>Translated_599_residues MELTRRDVLEGGVALIAGLAAAGLAAVGTSPAPVAACSYTQPASLRTIAMRRLAFGPSPELMAMYDATPGASDEERFNNW VRQQLNYTAIDNTPCANRILSAQLKIRYTHNSSTINEVRPLSWLSASRETLWQQRVVPDLPWAERIRPYEEVRVATWLRA VYSRRQLFEVMVDFWHNHFNVRATADQRIAATWPDYDRIIRTHALGNFYTMLVEVTKSVAMMYYLNNVSNKAGGGEGGNE NFARELFELHTLGSDNYLKFYSQRGNIPVVEYGSERYASAYIDYDVYDASRCLTGWTIANGRDGRPNTGAFYLMESWHDN YPKTVLAPAPLPGIEPAPNFPFNNGAERDGMEALRLAARHPGTARHLCTKLCRRLVADNPPESLINTAWSVWMQHRDSPD QIRRVVEAILLSPEAKSAFGAKICRPLEAMWAFLRATNAALPNDVPAVNGDATQGGYWSSLFWSADQTGHRLFGWDTPTG HPDRADYWANTNALLRTWNIFYTMAQSWGGNVTIDIVGQTPPGLSCAGIVDFWLQRMLTYIPTGDLRTLLINFLAQGGDP NQPPQPLRGAPDWGSADAVNDRIVAMVQLLATSPEFWLR >Mature_599_residues MELTRRDVLEGGVALIAGLAAAGLAAVGTSPAPVAACSYTQPASLRTIAMRRLAFGPSPELMAMYDATPGASDEERFNNW VRQQLNYTAIDNTPCANRILSAQLKIRYTHNSSTINEVRPLSWLSASRETLWQQRVVPDLPWAERIRPYEEVRVATWLRA VYSRRQLFEVMVDFWHNHFNVRATADQRIAATWPDYDRIIRTHALGNFYTMLVEVTKSVAMMYYLNNVSNKAGGGEGGNE NFARELFELHTLGSDNYLKFYSQRGNIPVVEYGSERYASAYIDYDVYDASRCLTGWTIANGRDGRPNTGAFYLMESWHDN YPKTVLAPAPLPGIEPAPNFPFNNGAERDGMEALRLAARHPGTARHLCTKLCRRLVADNPPESLINTAWSVWMQHRDSPD QIRRVVEAILLSPEAKSAFGAKICRPLEAMWAFLRATNAALPNDVPAVNGDATQGGYWSSLFWSADQTGHRLFGWDTPTG HPDRADYWANTNALLRTWNIFYTMAQSWGGNVTIDIVGQTPPGLSCAGIVDFWLQRMLTYIPTGDLRTLLINFLAQGGDP NQPPQPLRGAPDWGSADAVNDRIVAMVQLLATSPEFWLR
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66982; Mature: 66982
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTRRDVLEGGVALIAGLAAAGLAAVGTSPAPVAACSYTQPASLRTIAMRRLAFGPSPE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCC LMAMYDATPGASDEERFNNWVRQQLNYTAIDNTPCANRILSAQLKIRYTHNSSTINEVRP EEEEEECCCCCCHHHHHHHHHHHHCCCEECCCCCHHHHHHEEEEEEEEECCCCCHHHHCC LSWLSASRETLWQQRVVPDLPWAERIRPYEEVRVATWLRAVYSRRQLFEVMVDFWHNHFN HHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE VRATADQRIAATWPDYDRIIRTHALGNFYTMLVEVTKSVAMMYYLNNVSNKAGGGEGGNE EEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH NFARELFELHTLGSDNYLKFYSQRGNIPVVEYGSERYASAYIDYDVYDASRCLTGWTIAN HHHHHHHHHHHCCCCCHHHHHHCCCCCCEEECCCCHHEEEEEEEEHHHHHHHHCCCEECC GRDGRPNTGAFYLMESWHDNYPKTVLAPAPLPGIEPAPNFPFNNGAERDGMEALRLAARH CCCCCCCCCEEEEEHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC PGTARHLCTKLCRRLVADNPPESLINTAWSVWMQHRDSPDQIRRVVEAILLSPEAKSAFG CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHH AKICRPLEAMWAFLRATNAALPNDVPAVNGDATQGGYWSSLFWSADQTGHRLFGWDTPTG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCEEECCCCCCC HPDRADYWANTNALLRTWNIFYTMAQSWGGNVTIDIVGQTPPGLSCAGIVDFWLQRMLTY CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH IPTGDLRTLLINFLAQGGDPNQPPQPLRGAPDWGSADAVNDRIVAMVQLLATSPEFWLR CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure MELTRRDVLEGGVALIAGLAAAGLAAVGTSPAPVAACSYTQPASLRTIAMRRLAFGPSPE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCC LMAMYDATPGASDEERFNNWVRQQLNYTAIDNTPCANRILSAQLKIRYTHNSSTINEVRP EEEEEECCCCCCHHHHHHHHHHHHCCCEECCCCCHHHHHHEEEEEEEEECCCCCHHHHCC LSWLSASRETLWQQRVVPDLPWAERIRPYEEVRVATWLRAVYSRRQLFEVMVDFWHNHFN HHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE VRATADQRIAATWPDYDRIIRTHALGNFYTMLVEVTKSVAMMYYLNNVSNKAGGGEGGNE EEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH NFARELFELHTLGSDNYLKFYSQRGNIPVVEYGSERYASAYIDYDVYDASRCLTGWTIAN HHHHHHHHHHHCCCCCHHHHHHCCCCCCEEECCCCHHEEEEEEEEHHHHHHHHCCCEECC GRDGRPNTGAFYLMESWHDNYPKTVLAPAPLPGIEPAPNFPFNNGAERDGMEALRLAARH CCCCCCCCCEEEEEHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC PGTARHLCTKLCRRLVADNPPESLINTAWSVWMQHRDSPDQIRRVVEAILLSPEAKSAFG CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHH AKICRPLEAMWAFLRATNAALPNDVPAVNGDATQGGYWSSLFWSADQTGHRLFGWDTPTG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCEEECCCCCCC HPDRADYWANTNALLRTWNIFYTMAQSWGGNVTIDIVGQTPPGLSCAGIVDFWLQRMLTY CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH IPTGDLRTLLINFLAQGGDPNQPPQPLRGAPDWGSADAVNDRIVAMVQLLATSPEFWLR CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA