Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222526750
Identifier: 222526750
GI number: 222526750
Start: 4387241
End: 4388215
Strand: Reverse
Name: 222526750
Synonym: Chy400_3524
Alternate gene names: NA
Gene position: 4388215-4387241 (Counterclockwise)
Preceding gene: 222526757
Following gene: 222526748
Centisome position: 83.28
GC content: 55.9
Gene sequence:
>975_bases ATGATCCCTCAGTGGCTTACGCACAACCGTCTGTACGATCTGGCGCGCAGTGGTCAACGTCTACCACCCTGGTGGGCAGT GATACTGGTTGGTTTATTCATCGCTTTTGGTTCGCAGCTTTTTGCCTTGCCGATTGTCTTCATGCTTTTCCTCGCCGGTA TCATACCGATAACTGAAGAGAGTGCGCTTACCCAACCGCCGCTGCTATCAGGGCTTGGGTTGTCCCTTCAGTTAATGGTG GCCTTCGGGGCAATGATTCTGTTCACCTGGTTGTGGATACGCTTTTACGAGCGACGTTCTTTCACCACTCTTGGCTTCGA GCGGGGAAGCATCCTCTTCCTCTACGGTCGCGGCCTGCTCATCGGGTTGGCTGCATTCACAGCAACTGTAGGGCTAATGG CACTCTTGGGTTACATTGCTATCGAGGATAGTGATCCTGCACAGGTTGGGCTGGCGGCGCTCGGTGGAGTCGTGCTTGTC TTCTTCCCGGGCTGGCTGATTCAGGGCGCAGCCGAAGAAATTGTCACCCGGGGCTGGATGTTACCGACCCTCTCGGCACG CTACCGGGTATGGGTCGGATTACTCATCTCATCGCTCTTCTTTGCCTTTATGCACGCTCTCAACCCCAACATGAGTGTGC TGGCAATGATCAATCTGGCTCTGTACGGTCTGTTTGGCGCACTCTACGCTCTGCGTGAAGAGTCACTGTGGGGTATCTGT GCCTTCCATTCGATCTGGAACTGGGCGCAGGGAAACCTCTTCGGACTGCAAGTGAGCGGCCAGATGGTTAGCGGTGGCAT GATCTTCAATCTGGTTGAGACCGGTCCTGACTGGTTCACCGGCGGTGCATTCGGGCCGGAAGGCGGATTGGTGACAACGA TTGTCCTGCTGTTAAGCATCGCGATTATCTGGTGGTGGCCGGCAACCGGCCAGCGTGTCGCCACCCAACCGGTTACAGCG GATCGTGCGTTGTAG
Upstream 100 bases:
>100_bases ACAGATCATCTTTTACCCGACTCGATCCCTCTTGACGACGATGTATGGTTATTGTTAGAATAAATGATAACGATATTATT ATTGATAATAAGGAGCAGAT
Downstream 100 bases:
>100_bases TCGGCTAGGGTTGATGATTCCACAGTGTCAACTGCGCTTCATCAACGACACCTGACGCCATTCTCAATAGTTCCTGCAGG GGATGGGGAAACCTTACGGG
Product: abortive infection protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family Protein; Metal-Dependent Membrane Protease; CAAX Amino Terminal Protease Family; Protease; CAAX Amino Terminal Protease; Caax Amino Protease Family; Ypothetical Protein SMU.; Membrane-Associated CAAX Amino Terminal Protease; CAAX Amino Protease Family Protein; Caax Amino Terminal Protease Family; CAAX Amino Protease; CAAX-Like Membrane Endopeptidase
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MIPQWLTHNRLYDLARSGQRLPPWWAVILVGLFIAFGSQLFALPIVFMLFLAGIIPITEESALTQPPLLSGLGLSLQLMV AFGAMILFTWLWIRFYERRSFTTLGFERGSILFLYGRGLLIGLAAFTATVGLMALLGYIAIEDSDPAQVGLAALGGVVLV FFPGWLIQGAAEEIVTRGWMLPTLSARYRVWVGLLISSLFFAFMHALNPNMSVLAMINLALYGLFGALYALREESLWGIC AFHSIWNWAQGNLFGLQVSGQMVSGGMIFNLVETGPDWFTGGAFGPEGGLVTTIVLLLSIAIIWWWPATGQRVATQPVTA DRAL
Sequences:
>Translated_324_residues MIPQWLTHNRLYDLARSGQRLPPWWAVILVGLFIAFGSQLFALPIVFMLFLAGIIPITEESALTQPPLLSGLGLSLQLMV AFGAMILFTWLWIRFYERRSFTTLGFERGSILFLYGRGLLIGLAAFTATVGLMALLGYIAIEDSDPAQVGLAALGGVVLV FFPGWLIQGAAEEIVTRGWMLPTLSARYRVWVGLLISSLFFAFMHALNPNMSVLAMINLALYGLFGALYALREESLWGIC AFHSIWNWAQGNLFGLQVSGQMVSGGMIFNLVETGPDWFTGGAFGPEGGLVTTIVLLLSIAIIWWWPATGQRVATQPVTA DRAL >Mature_324_residues MIPQWLTHNRLYDLARSGQRLPPWWAVILVGLFIAFGSQLFALPIVFMLFLAGIIPITEESALTQPPLLSGLGLSLQLMV AFGAMILFTWLWIRFYERRSFTTLGFERGSILFLYGRGLLIGLAAFTATVGLMALLGYIAIEDSDPAQVGLAALGGVVLV FFPGWLIQGAAEEIVTRGWMLPTLSARYRVWVGLLISSLFFAFMHALNPNMSVLAMINLALYGLFGALYALREESLWGIC AFHSIWNWAQGNLFGLQVSGQMVSGGMIFNLVETGPDWFTGGAFGPEGGLVTTIVLLLSIAIIWWWPATGQRVATQPVTA DRAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35567; Mature: 35567
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPQWLTHNRLYDLARSGQRLPPWWAVILVGLFIAFGSQLFALPIVFMLFLAGIIPITEE CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SALTQPPLLSGLGLSLQLMVAFGAMILFTWLWIRFYERRSFTTLGFERGSILFLYGRGLL CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCHHH IGLAAFTATVGLMALLGYIAIEDSDPAQVGLAALGGVVLVFFPGWLIQGAAEEIVTRGWM HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LPTLSARYRVWVGLLISSLFFAFMHALNPNMSVLAMINLALYGLFGALYALREESLWGIC CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AFHSIWNWAQGNLFGLQVSGQMVSGGMIFNLVETGPDWFTGGAFGPEGGLVTTIVLLLSI HHHHHHHCCCCCEEEEEEECEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH AIIWWWPATGQRVATQPVTADRAL HHHHCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MIPQWLTHNRLYDLARSGQRLPPWWAVILVGLFIAFGSQLFALPIVFMLFLAGIIPITEE CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SALTQPPLLSGLGLSLQLMVAFGAMILFTWLWIRFYERRSFTTLGFERGSILFLYGRGLL CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCHHH IGLAAFTATVGLMALLGYIAIEDSDPAQVGLAALGGVVLVFFPGWLIQGAAEEIVTRGWM HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LPTLSARYRVWVGLLISSLFFAFMHALNPNMSVLAMINLALYGLFGALYALREESLWGIC CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AFHSIWNWAQGNLFGLQVSGQMVSGGMIFNLVETGPDWFTGGAFGPEGGLVTTIVLLLSI HHHHHHHCCCCCEEEEEEECEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH AIIWWWPATGQRVATQPVTADRAL HHHHCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA