Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222526748
Identifier: 222526748
GI number: 222526748
Start: 4386430
End: 4386909
Strand: Reverse
Name: 222526748
Synonym: Chy400_3522
Alternate gene names: NA
Gene position: 4386909-4386430 (Counterclockwise)
Preceding gene: 222526750
Following gene: 222526747
Centisome position: 83.26
GC content: 57.29
Gene sequence:
>480_bases ATGACTCAGCCTCCAAATGGCTTTGACCCGAATGATCCAATCGGGACCTGGCGCGCCTGGCGCGACGCCAGCCTGGAAGC ATGGGCAAAAAGCCTGACCGCGATGGTCAATACCGAAACGTTCTCTCAGGCGATTGGCGCCCAACTCGATGCGCTCCTGG CCGTCTCAGGGCCGGTACAGCAGGCCGTCCAACAATACATGGAGCGCTATCTGGCTCAGGCTCAGCTTCCCTCTCGTAAT GAGGTAGTGACCCTGGCCGAACGATTAACAAACATCGAATTTCGTCTCGATGATATGCAGGCTCAACTCGATGAATTGAC TGACCTGGTGCGCAAGCTGGCAGTTGCGCAAACACCCACCGCGGTTGACGTTGGCGTGATTGATGAACGCCTGCGGGGTA TTGAGGAACAACTGACCGCTCTTGCCGCCGTCCGTCCCTCCGGTCGTATCCGCAAGGCAACGACTGAAGACAAAGAGTAG
Upstream 100 bases:
>100_bases ATACTGCATGTAACCATCCTGTAACTACAATCACTACCCTACAAGCAGAACCGCGCATCTCAACGCGCCTTTGTGGCGTG TCATTACAAGGAGATTGGCA
Downstream 100 bases:
>100_bases GAGTGTTTGATCATGACCAGTTCTGATGCCGCGCCAATCGATCTTGAGCGGATGACCGAGCAGTTGCTGAAAGAGATCGA GCGCACAACGAAGAGCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTQPPNGFDPNDPIGTWRAWRDASLEAWAKSLTAMVNTETFSQAIGAQLDALLAVSGPVQQAVQQYMERYLAQAQLPSRN EVVTLAERLTNIEFRLDDMQAQLDELTDLVRKLAVAQTPTAVDVGVIDERLRGIEEQLTALAAVRPSGRIRKATTEDKE
Sequences:
>Translated_159_residues MTQPPNGFDPNDPIGTWRAWRDASLEAWAKSLTAMVNTETFSQAIGAQLDALLAVSGPVQQAVQQYMERYLAQAQLPSRN EVVTLAERLTNIEFRLDDMQAQLDELTDLVRKLAVAQTPTAVDVGVIDERLRGIEEQLTALAAVRPSGRIRKATTEDKE >Mature_158_residues TQPPNGFDPNDPIGTWRAWRDASLEAWAKSLTAMVNTETFSQAIGAQLDALLAVSGPVQQAVQQYMERYLAQAQLPSRNE VVTLAERLTNIEFRLDDMQAQLDELTDLVRKLAVAQTPTAVDVGVIDERLRGIEEQLTALAAVRPSGRIRKATTEDKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17606; Mature: 17475
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPPNGFDPNDPIGTWRAWRDASLEAWAKSLTAMVNTETFSQAIGAQLDALLAVSGPVQ CCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QAVQQYMERYLAQAQLPSRNEVVTLAERLTNIEFRLDDMQAQLDELTDLVRKLAVAQTPT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AVDVGVIDERLRGIEEQLTALAAVRPSGRIRKATTEDKE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC >Mature Secondary Structure TQPPNGFDPNDPIGTWRAWRDASLEAWAKSLTAMVNTETFSQAIGAQLDALLAVSGPVQ CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QAVQQYMERYLAQAQLPSRNEVVTLAERLTNIEFRLDDMQAQLDELTDLVRKLAVAQTPT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AVDVGVIDERLRGIEEQLTALAAVRPSGRIRKATTEDKE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA