| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526686
Identifier: 222526686
GI number: 222526686
Start: 4308432
End: 4309370
Strand: Reverse
Name: 222526686
Synonym: Chy400_3456
Alternate gene names: NA
Gene position: 4309370-4308432 (Counterclockwise)
Preceding gene: 222526687
Following gene: 222526684
Centisome position: 81.79
GC content: 58.25
Gene sequence:
>939_bases GTGAACGATACCGCTGACCTTGTAGCCCGCCAGACCCTGGCCGATGTCATTGGCCGTCTCCTTATCGCACCGCCTTCCGC TCAGCTTTGGGCGGAGGCGGTGGCACTGCCTGAACTGGCAACGGTGATGACAGATCAACCGGAGAGCCTGGCGGTTGCGT ATGAGCAGACCTTCGGACGCAATGTCTACCCTTACGAGTCGCTTTACCGCGACGAAGAACTCATGCTCAACACCGCAGCC GCCGATCAGGTGGCGGCTTTCTACGCTACCTGTGGCTTTACGCCACCGCAGACTGTTGGTGCTCCCGACCATTTGGGGAT CGAATTCCTCTTTCTTGCCCGCCTGATCGCCACTGAAGCAGCAGCTCTGGCCGATGGCGACAGTAGATTGCAGCAGTGGG CACACCAACACGCAGCGTCCTTTCTCGGCAACCATCTCGCCGTCTGGGTGCCGGTTTGGGCGCATGCTGTGCAGCGCATT CCCGGTCATCCACTCTATCAAACCCTGGCCACCCTCGCGGTAGAATTTATCGAGAGCGAGCTGGAGCGTCTTCAACCGGT ACCGTCCTCATCTCGCTCATACATTCCGCTCGCCACGAGCGCTGCCTCGCCAGAAACAGATGACCTCAACACGCTGATAC GTCATCTCATTACACCGGTACGCGCCGGCATCTTCTTCAGCCGCGCCGATTGCTCACAGTTGGCCCGCCGGCTCGGATTT TCAATCCCAATTGGGGATCGCTTCACGATGATGCGCACCCTCTTCGAGACTGCCGGTGAGTTTGAGCAAGCAGACGGATT AATCGTTGCCTTGCAAGAAATGATGTCAGCCGAAGCACAAAGGTTGTCTATGCTGATTGATGGGCAGGCGGTCTGGCAAC CATTTCTCGCCCCGTGGATCGAGCGGTTGGAGCGTAGTCAACGCTTGATCAGCACCTAG
Upstream 100 bases:
>100_bases CGGCAAGCAAGGTGTCACCAAACGGCATGCGTCGGCCACACTGGCTGTTGCGACCGTTCCGCCCGGCCCGTGAGGCGTAT TTCCTGCCGGAGAAAAAATC
Downstream 100 bases:
>100_bases CTTTACACCAGACCCGGTCTTCGGCACTCTTCAGCCGCGAATGCACAGGCTTGCGCCTATGCAATTTGCTTGTCGTTATC AACCAGTGCGACTCCACGCG
Product: anaerobic dehydrogenase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MNDTADLVARQTLADVIGRLLIAPPSAQLWAEAVALPELATVMTDQPESLAVAYEQTFGRNVYPYESLYRDEELMLNTAA ADQVAAFYATCGFTPPQTVGAPDHLGIEFLFLARLIATEAAALADGDSRLQQWAHQHAASFLGNHLAVWVPVWAHAVQRI PGHPLYQTLATLAVEFIESELERLQPVPSSSRSYIPLATSAASPETDDLNTLIRHLITPVRAGIFFSRADCSQLARRLGF SIPIGDRFTMMRTLFETAGEFEQADGLIVALQEMMSAEAQRLSMLIDGQAVWQPFLAPWIERLERSQRLIST
Sequences:
>Translated_312_residues MNDTADLVARQTLADVIGRLLIAPPSAQLWAEAVALPELATVMTDQPESLAVAYEQTFGRNVYPYESLYRDEELMLNTAA ADQVAAFYATCGFTPPQTVGAPDHLGIEFLFLARLIATEAAALADGDSRLQQWAHQHAASFLGNHLAVWVPVWAHAVQRI PGHPLYQTLATLAVEFIESELERLQPVPSSSRSYIPLATSAASPETDDLNTLIRHLITPVRAGIFFSRADCSQLARRLGF SIPIGDRFTMMRTLFETAGEFEQADGLIVALQEMMSAEAQRLSMLIDGQAVWQPFLAPWIERLERSQRLIST >Mature_312_residues MNDTADLVARQTLADVIGRLLIAPPSAQLWAEAVALPELATVMTDQPESLAVAYEQTFGRNVYPYESLYRDEELMLNTAA ADQVAAFYATCGFTPPQTVGAPDHLGIEFLFLARLIATEAAALADGDSRLQQWAHQHAASFLGNHLAVWVPVWAHAVQRI PGHPLYQTLATLAVEFIESELERLQPVPSSSRSYIPLATSAASPETDDLNTLIRHLITPVRAGIFFSRADCSQLARRLGF SIPIGDRFTMMRTLFETAGEFEQADGLIVALQEMMSAEAQRLSMLIDGQAVWQPFLAPWIERLERSQRLIST
Specific function: Unknown
COG id: COG3381
COG function: function code R; Uncharacterized component of anaerobic dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34436; Mature: 34436
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTADLVARQTLADVIGRLLIAPPSAQLWAEAVALPELATVMTDQPESLAVAYEQTFGR CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC NVYPYESLYRDEELMLNTAAADQVAAFYATCGFTPPQTVGAPDHLGIEFLFLARLIATEA CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AALADGDSRLQQWAHQHAASFLGNHLAVWVPVWAHAVQRIPGHPLYQTLATLAVEFIESE HHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LERLQPVPSSSRSYIPLATSAASPETDDLNTLIRHLITPVRAGIFFSRADCSQLARRLGF HHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SIPIGDRFTMMRTLFETAGEFEQADGLIVALQEMMSAEAQRLSMLIDGQAVWQPFLAPWI CCCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ERLERSQRLIST HHHHHHHHHHCC >Mature Secondary Structure MNDTADLVARQTLADVIGRLLIAPPSAQLWAEAVALPELATVMTDQPESLAVAYEQTFGR CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC NVYPYESLYRDEELMLNTAAADQVAAFYATCGFTPPQTVGAPDHLGIEFLFLARLIATEA CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AALADGDSRLQQWAHQHAASFLGNHLAVWVPVWAHAVQRIPGHPLYQTLATLAVEFIESE HHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LERLQPVPSSSRSYIPLATSAASPETDDLNTLIRHLITPVRAGIFFSRADCSQLARRLGF HHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SIPIGDRFTMMRTLFETAGEFEQADGLIVALQEMMSAEAQRLSMLIDGQAVWQPFLAPWI CCCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ERLERSQRLIST HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA