Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222526684

Identifier: 222526684

GI number: 222526684

Start: 4305350

End: 4307107

Strand: Reverse

Name: 222526684

Synonym: Chy400_3454

Alternate gene names: NA

Gene position: 4307107-4305350 (Counterclockwise)

Preceding gene: 222526686

Following gene: 222526683

Centisome position: 81.75

GC content: 55.12

Gene sequence:

>1758_bases
ATGATCACCTATACGATTGCAATGCCAATGCCGCATTCCCACCTCTTTCATGTGCAGATCGAGATCGAACGTAACGAAAC
CGGTGAGATTCGCCTATCGTTACCGGCATGGACTCCTGGTTCATATATGATTCGTGAGTTTGCACGCCATGTGCAGGAAT
TTCAAGCAGTTGACACGCAGGGTGTGCGGTTGCCGTGGCGAAAAATTCGCAAAGATTGCTGGCTGGTTGAGGCCGGTGCT
GCGTCGCGGGTGATAGTGACCTACAAAGTATACGCATTTGATCTTACCGTGCGTACCAGTCATCTTGACGGATCGCACGG
CTATTTCAATGGCGCAAATGTGTTTATGTATGTCCACGGTCGCACGCAGGAACCATTGGCCCTGCACGTCGATCCGCCCA
CCGGCTGGCAGGTGACGACCGGCCTGACCGCGTTACCGCCCGATCCGGCGCGTCCGCAGCGCGCTTCATTCCAGGCCACC
GATTACGATGAATTGATCGATTGCCCGGTTGAATGCGGAACGCATCGCTTGCTCACCTTCACGGTTGATGATGTCCCACA
CACTATTGCCATTTGGGGCCACGGCAACGAAAACGAAGAGCGATTGCTGGCCGACACCAAACGAATCGTTGAGGTGCAGC
GAGCAATGTTCGGTAGTCTACCCTACCGCGACTATACCTTCATCGTGCATCTGACCGATGGCAAGGGTGGTGGACTCGAG
CATCGCAATAGTGCTACCAATATGGTTGACCGCTGGACATTCGGTGAGCACTACGAGCGCTATTTGAGTCTGACCTCGCA
CGAACTGTTTCACGCCTGGAACGTCAAGCGATTGCGCCCGGCACCCCTGGGGCCGTTCGATTATCAAAACGAGAACTACA
CCCGACTCCTGTGGTTGATGGAGGGTGCCACCAGCTATTACGACGATTTGCTTCTGGTACGGGCCGGGCTGATGAGTGAA
GAGCGTTATTTGCAAAAACTGGCAGAGAAGATCGTCCAATTGCAGAGTCAACCCGGTCGTCGTCTCCAGAGCCTCGAACA
GAGTAGTTTTGATGCCTGGATTAAGTTCTACCGTCCTGATGAAAACAGTATCAATTCAAGCATCTCGTACTATTTGAAAG
GTGCGTTGGTGTGCTGGATGTTTGACATGGCGATCCGGGCGCAAACCAATAACGAACGCAGCTTCGACGATGTGATGCGC
TATTTGTACCAGCGTTACCCAATCACCGGGCCTGGCATCCCGGAGGACGGCGCAGTACTGGCGGCAATTGAAGCGATTGG
CGGTACAGACAATGGCTTACGTTCGCTCTACGAACGCTATGTTGTCGGTGTCGACGAGCTGGATTATGCAGCAGCGCTGG
CTGTTGTCGGGTTGGAACCGCGCTGGCAATACCGCCGACCACGGCCCGATGGTCAGCCACCGGCATGGCTGGGTGTGAGT
TGGAAGAAACAGGGTGAGCGCACCATTGTGGCTACAGTGCGCAGTGACGGCCCTGCTTACGAAGCGGGGGTATATGCCGA
TGATGAGCTGGTTGCCCTCGATGGCTGGCGCGTCAATGAAGAGCGTTTGCAGCAACGACTGCTTGAACGTCAACCCGGTG
ATGTCGTGCGGTTGACCCTCTTCCGGGGAGATGCGTTGATTGACGTCCCGGTGACACTGGCTGTCGCGCCATATGATATG
CTATCACTGGTCAATGTAGCAGCGCCGACGGCTGCCCAATTGCACACCCGTTCAGCGTGGCTGCAAAGAATGGTCTAG

Upstream 100 bases:

>100_bases
CGTTGCGCTCACCGGTTTTGCAGGTTATTGTTACGAACAATTGCCTGTCATGCACCGACATTCATGCTCTTTTCGATAGC
TTTGGACAAGGAGCTTCATC

Downstream 100 bases:

>100_bases
GCACTTCACAGAACAAGAGTGACAGCGACGATGAATACAACGTCAACTGAGACACGCAAAGCAATGGCGGCAGCGGCGGC
GGTAGCCCTGGTACGGCCAG

Product: peptidase M61 domain-containing protein

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; Glycyl Aminopeptidase; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Trypsin-Like Serine Protease; Aminopeptidase N Family Protein; Metallopeptidase; Glycyl Aminopeptidase Protein; PDZ Domain-Containing Protein; PDZ Domain Family Protein; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Protease With C-Terminal PDZ Domain; Aminopeptidase; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MITYTIAMPMPHSHLFHVQIEIERNETGEIRLSLPAWTPGSYMIREFARHVQEFQAVDTQGVRLPWRKIRKDCWLVEAGA
ASRVIVTYKVYAFDLTVRTSHLDGSHGYFNGANVFMYVHGRTQEPLALHVDPPTGWQVTTGLTALPPDPARPQRASFQAT
DYDELIDCPVECGTHRLLTFTVDDVPHTIAIWGHGNENEERLLADTKRIVEVQRAMFGSLPYRDYTFIVHLTDGKGGGLE
HRNSATNMVDRWTFGEHYERYLSLTSHELFHAWNVKRLRPAPLGPFDYQNENYTRLLWLMEGATSYYDDLLLVRAGLMSE
ERYLQKLAEKIVQLQSQPGRRLQSLEQSSFDAWIKFYRPDENSINSSISYYLKGALVCWMFDMAIRAQTNNERSFDDVMR
YLYQRYPITGPGIPEDGAVLAAIEAIGGTDNGLRSLYERYVVGVDELDYAAALAVVGLEPRWQYRRPRPDGQPPAWLGVS
WKKQGERTIVATVRSDGPAYEAGVYADDELVALDGWRVNEERLQQRLLERQPGDVVRLTLFRGDALIDVPVTLAVAPYDM
LSLVNVAAPTAAQLHTRSAWLQRMV

Sequences:

>Translated_585_residues
MITYTIAMPMPHSHLFHVQIEIERNETGEIRLSLPAWTPGSYMIREFARHVQEFQAVDTQGVRLPWRKIRKDCWLVEAGA
ASRVIVTYKVYAFDLTVRTSHLDGSHGYFNGANVFMYVHGRTQEPLALHVDPPTGWQVTTGLTALPPDPARPQRASFQAT
DYDELIDCPVECGTHRLLTFTVDDVPHTIAIWGHGNENEERLLADTKRIVEVQRAMFGSLPYRDYTFIVHLTDGKGGGLE
HRNSATNMVDRWTFGEHYERYLSLTSHELFHAWNVKRLRPAPLGPFDYQNENYTRLLWLMEGATSYYDDLLLVRAGLMSE
ERYLQKLAEKIVQLQSQPGRRLQSLEQSSFDAWIKFYRPDENSINSSISYYLKGALVCWMFDMAIRAQTNNERSFDDVMR
YLYQRYPITGPGIPEDGAVLAAIEAIGGTDNGLRSLYERYVVGVDELDYAAALAVVGLEPRWQYRRPRPDGQPPAWLGVS
WKKQGERTIVATVRSDGPAYEAGVYADDELVALDGWRVNEERLQQRLLERQPGDVVRLTLFRGDALIDVPVTLAVAPYDM
LSLVNVAAPTAAQLHTRSAWLQRMV
>Mature_585_residues
MITYTIAMPMPHSHLFHVQIEIERNETGEIRLSLPAWTPGSYMIREFARHVQEFQAVDTQGVRLPWRKIRKDCWLVEAGA
ASRVIVTYKVYAFDLTVRTSHLDGSHGYFNGANVFMYVHGRTQEPLALHVDPPTGWQVTTGLTALPPDPARPQRASFQAT
DYDELIDCPVECGTHRLLTFTVDDVPHTIAIWGHGNENEERLLADTKRIVEVQRAMFGSLPYRDYTFIVHLTDGKGGGLE
HRNSATNMVDRWTFGEHYERYLSLTSHELFHAWNVKRLRPAPLGPFDYQNENYTRLLWLMEGATSYYDDLLLVRAGLMSE
ERYLQKLAEKIVQLQSQPGRRLQSLEQSSFDAWIKFYRPDENSINSSISYYLKGALVCWMFDMAIRAQTNNERSFDDVMR
YLYQRYPITGPGIPEDGAVLAAIEAIGGTDNGLRSLYERYVVGVDELDYAAALAVVGLEPRWQYRRPRPDGQPPAWLGVS
WKKQGERTIVATVRSDGPAYEAGVYADDELVALDGWRVNEERLQQRLLERQPGDVVRLTLFRGDALIDVPVTLAVAPYDM
LSLVNVAAPTAAQLHTRSAWLQRMV

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66713; Mature: 66713

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITYTIAMPMPHSHLFHVQIEIERNETGEIRLSLPAWTPGSYMIREFARHVQEFQAVDTQ
CEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC
GVRLPWRKIRKDCWLVEAGAASRVIVTYKVYAFDLTVRTSHLDGSHGYFNGANVFMYVHG
CCCCCHHHHCCCCEEEECCCCCEEEEEEEEEEEEEEEEEECCCCCCCEECCCEEEEEEEC
RTQEPLALHVDPPTGWQVTTGLTALPPDPARPQRASFQATDYDELIDCPVECGTHRLLTF
CCCCCEEEEECCCCCCEEECCCEECCCCCCCCCCCCCCCCCHHHHHCCCHHCCCEEEEEE
TVDDVPHTIAIWGHGNENEERLLADTKRIVEVQRAMFGSLPYRDYTFIVHLTDGKGGGLE
EECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC
HRNSATNMVDRWTFGEHYERYLSLTSHELFHAWNVKRLRPAPLGPFDYQNENYTRLLWLM
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEE
EGATSYYDDLLLVRAGLMSEERYLQKLAEKIVQLQSQPGRRLQSLEQSSFDAWIKFYRPD
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCC
ENSINSSISYYLKGALVCWMFDMAIRAQTNNERSFDDVMRYLYQRYPITGPGIPEDGAVL
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEE
AAIEAIGGTDNGLRSLYERYVVGVDELDYAAALAVVGLEPRWQYRRPRPDGQPPAWLGVS
EEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEECC
WKKQGERTIVATVRSDGPAYEAGVYADDELVALDGWRVNEERLQQRLLERQPGDVVRLTL
CCCCCCEEEEEEEECCCCCEECCEECCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEE
FRGDALIDVPVTLAVAPYDMLSLVNVAAPTAAQLHTRSAWLQRMV
EECCEEEECCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITYTIAMPMPHSHLFHVQIEIERNETGEIRLSLPAWTPGSYMIREFARHVQEFQAVDTQ
CEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC
GVRLPWRKIRKDCWLVEAGAASRVIVTYKVYAFDLTVRTSHLDGSHGYFNGANVFMYVHG
CCCCCHHHHCCCCEEEECCCCCEEEEEEEEEEEEEEEEEECCCCCCCEECCCEEEEEEEC
RTQEPLALHVDPPTGWQVTTGLTALPPDPARPQRASFQATDYDELIDCPVECGTHRLLTF
CCCCCEEEEECCCCCCEEECCCEECCCCCCCCCCCCCCCCCHHHHHCCCHHCCCEEEEEE
TVDDVPHTIAIWGHGNENEERLLADTKRIVEVQRAMFGSLPYRDYTFIVHLTDGKGGGLE
EECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC
HRNSATNMVDRWTFGEHYERYLSLTSHELFHAWNVKRLRPAPLGPFDYQNENYTRLLWLM
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEE
EGATSYYDDLLLVRAGLMSEERYLQKLAEKIVQLQSQPGRRLQSLEQSSFDAWIKFYRPD
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCC
ENSINSSISYYLKGALVCWMFDMAIRAQTNNERSFDDVMRYLYQRYPITGPGIPEDGAVL
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEE
AAIEAIGGTDNGLRSLYERYVVGVDELDYAAALAVVGLEPRWQYRRPRPDGQPPAWLGVS
EEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEECC
WKKQGERTIVATVRSDGPAYEAGVYADDELVALDGWRVNEERLQQRLLERQPGDVVRLTL
CCCCCCEEEEEEEECCCCCEECCEECCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEE
FRGDALIDVPVTLAVAPYDMLSLVNVAAPTAAQLHTRSAWLQRMV
EECCEEEECCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA