| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526684
Identifier: 222526684
GI number: 222526684
Start: 4305350
End: 4307107
Strand: Reverse
Name: 222526684
Synonym: Chy400_3454
Alternate gene names: NA
Gene position: 4307107-4305350 (Counterclockwise)
Preceding gene: 222526686
Following gene: 222526683
Centisome position: 81.75
GC content: 55.12
Gene sequence:
>1758_bases ATGATCACCTATACGATTGCAATGCCAATGCCGCATTCCCACCTCTTTCATGTGCAGATCGAGATCGAACGTAACGAAAC CGGTGAGATTCGCCTATCGTTACCGGCATGGACTCCTGGTTCATATATGATTCGTGAGTTTGCACGCCATGTGCAGGAAT TTCAAGCAGTTGACACGCAGGGTGTGCGGTTGCCGTGGCGAAAAATTCGCAAAGATTGCTGGCTGGTTGAGGCCGGTGCT GCGTCGCGGGTGATAGTGACCTACAAAGTATACGCATTTGATCTTACCGTGCGTACCAGTCATCTTGACGGATCGCACGG CTATTTCAATGGCGCAAATGTGTTTATGTATGTCCACGGTCGCACGCAGGAACCATTGGCCCTGCACGTCGATCCGCCCA CCGGCTGGCAGGTGACGACCGGCCTGACCGCGTTACCGCCCGATCCGGCGCGTCCGCAGCGCGCTTCATTCCAGGCCACC GATTACGATGAATTGATCGATTGCCCGGTTGAATGCGGAACGCATCGCTTGCTCACCTTCACGGTTGATGATGTCCCACA CACTATTGCCATTTGGGGCCACGGCAACGAAAACGAAGAGCGATTGCTGGCCGACACCAAACGAATCGTTGAGGTGCAGC GAGCAATGTTCGGTAGTCTACCCTACCGCGACTATACCTTCATCGTGCATCTGACCGATGGCAAGGGTGGTGGACTCGAG CATCGCAATAGTGCTACCAATATGGTTGACCGCTGGACATTCGGTGAGCACTACGAGCGCTATTTGAGTCTGACCTCGCA CGAACTGTTTCACGCCTGGAACGTCAAGCGATTGCGCCCGGCACCCCTGGGGCCGTTCGATTATCAAAACGAGAACTACA CCCGACTCCTGTGGTTGATGGAGGGTGCCACCAGCTATTACGACGATTTGCTTCTGGTACGGGCCGGGCTGATGAGTGAA GAGCGTTATTTGCAAAAACTGGCAGAGAAGATCGTCCAATTGCAGAGTCAACCCGGTCGTCGTCTCCAGAGCCTCGAACA GAGTAGTTTTGATGCCTGGATTAAGTTCTACCGTCCTGATGAAAACAGTATCAATTCAAGCATCTCGTACTATTTGAAAG GTGCGTTGGTGTGCTGGATGTTTGACATGGCGATCCGGGCGCAAACCAATAACGAACGCAGCTTCGACGATGTGATGCGC TATTTGTACCAGCGTTACCCAATCACCGGGCCTGGCATCCCGGAGGACGGCGCAGTACTGGCGGCAATTGAAGCGATTGG CGGTACAGACAATGGCTTACGTTCGCTCTACGAACGCTATGTTGTCGGTGTCGACGAGCTGGATTATGCAGCAGCGCTGG CTGTTGTCGGGTTGGAACCGCGCTGGCAATACCGCCGACCACGGCCCGATGGTCAGCCACCGGCATGGCTGGGTGTGAGT TGGAAGAAACAGGGTGAGCGCACCATTGTGGCTACAGTGCGCAGTGACGGCCCTGCTTACGAAGCGGGGGTATATGCCGA TGATGAGCTGGTTGCCCTCGATGGCTGGCGCGTCAATGAAGAGCGTTTGCAGCAACGACTGCTTGAACGTCAACCCGGTG ATGTCGTGCGGTTGACCCTCTTCCGGGGAGATGCGTTGATTGACGTCCCGGTGACACTGGCTGTCGCGCCATATGATATG CTATCACTGGTCAATGTAGCAGCGCCGACGGCTGCCCAATTGCACACCCGTTCAGCGTGGCTGCAAAGAATGGTCTAG
Upstream 100 bases:
>100_bases CGTTGCGCTCACCGGTTTTGCAGGTTATTGTTACGAACAATTGCCTGTCATGCACCGACATTCATGCTCTTTTCGATAGC TTTGGACAAGGAGCTTCATC
Downstream 100 bases:
>100_bases GCACTTCACAGAACAAGAGTGACAGCGACGATGAATACAACGTCAACTGAGACACGCAAAGCAATGGCGGCAGCGGCGGC GGTAGCCCTGGTACGGCCAG
Product: peptidase M61 domain-containing protein
Products: NA
Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; Glycyl Aminopeptidase; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Trypsin-Like Serine Protease; Aminopeptidase N Family Protein; Metallopeptidase; Glycyl Aminopeptidase Protein; PDZ Domain-Containing Protein; PDZ Domain Family Protein; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Protease With C-Terminal PDZ Domain; Aminopeptidase; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MITYTIAMPMPHSHLFHVQIEIERNETGEIRLSLPAWTPGSYMIREFARHVQEFQAVDTQGVRLPWRKIRKDCWLVEAGA ASRVIVTYKVYAFDLTVRTSHLDGSHGYFNGANVFMYVHGRTQEPLALHVDPPTGWQVTTGLTALPPDPARPQRASFQAT DYDELIDCPVECGTHRLLTFTVDDVPHTIAIWGHGNENEERLLADTKRIVEVQRAMFGSLPYRDYTFIVHLTDGKGGGLE HRNSATNMVDRWTFGEHYERYLSLTSHELFHAWNVKRLRPAPLGPFDYQNENYTRLLWLMEGATSYYDDLLLVRAGLMSE ERYLQKLAEKIVQLQSQPGRRLQSLEQSSFDAWIKFYRPDENSINSSISYYLKGALVCWMFDMAIRAQTNNERSFDDVMR YLYQRYPITGPGIPEDGAVLAAIEAIGGTDNGLRSLYERYVVGVDELDYAAALAVVGLEPRWQYRRPRPDGQPPAWLGVS WKKQGERTIVATVRSDGPAYEAGVYADDELVALDGWRVNEERLQQRLLERQPGDVVRLTLFRGDALIDVPVTLAVAPYDM LSLVNVAAPTAAQLHTRSAWLQRMV
Sequences:
>Translated_585_residues MITYTIAMPMPHSHLFHVQIEIERNETGEIRLSLPAWTPGSYMIREFARHVQEFQAVDTQGVRLPWRKIRKDCWLVEAGA ASRVIVTYKVYAFDLTVRTSHLDGSHGYFNGANVFMYVHGRTQEPLALHVDPPTGWQVTTGLTALPPDPARPQRASFQAT DYDELIDCPVECGTHRLLTFTVDDVPHTIAIWGHGNENEERLLADTKRIVEVQRAMFGSLPYRDYTFIVHLTDGKGGGLE HRNSATNMVDRWTFGEHYERYLSLTSHELFHAWNVKRLRPAPLGPFDYQNENYTRLLWLMEGATSYYDDLLLVRAGLMSE ERYLQKLAEKIVQLQSQPGRRLQSLEQSSFDAWIKFYRPDENSINSSISYYLKGALVCWMFDMAIRAQTNNERSFDDVMR YLYQRYPITGPGIPEDGAVLAAIEAIGGTDNGLRSLYERYVVGVDELDYAAALAVVGLEPRWQYRRPRPDGQPPAWLGVS WKKQGERTIVATVRSDGPAYEAGVYADDELVALDGWRVNEERLQQRLLERQPGDVVRLTLFRGDALIDVPVTLAVAPYDM LSLVNVAAPTAAQLHTRSAWLQRMV >Mature_585_residues MITYTIAMPMPHSHLFHVQIEIERNETGEIRLSLPAWTPGSYMIREFARHVQEFQAVDTQGVRLPWRKIRKDCWLVEAGA ASRVIVTYKVYAFDLTVRTSHLDGSHGYFNGANVFMYVHGRTQEPLALHVDPPTGWQVTTGLTALPPDPARPQRASFQAT DYDELIDCPVECGTHRLLTFTVDDVPHTIAIWGHGNENEERLLADTKRIVEVQRAMFGSLPYRDYTFIVHLTDGKGGGLE HRNSATNMVDRWTFGEHYERYLSLTSHELFHAWNVKRLRPAPLGPFDYQNENYTRLLWLMEGATSYYDDLLLVRAGLMSE ERYLQKLAEKIVQLQSQPGRRLQSLEQSSFDAWIKFYRPDENSINSSISYYLKGALVCWMFDMAIRAQTNNERSFDDVMR YLYQRYPITGPGIPEDGAVLAAIEAIGGTDNGLRSLYERYVVGVDELDYAAALAVVGLEPRWQYRRPRPDGQPPAWLGVS WKKQGERTIVATVRSDGPAYEAGVYADDELVALDGWRVNEERLQQRLLERQPGDVVRLTLFRGDALIDVPVTLAVAPYDM LSLVNVAAPTAAQLHTRSAWLQRMV
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66713; Mature: 66713
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITYTIAMPMPHSHLFHVQIEIERNETGEIRLSLPAWTPGSYMIREFARHVQEFQAVDTQ CEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC GVRLPWRKIRKDCWLVEAGAASRVIVTYKVYAFDLTVRTSHLDGSHGYFNGANVFMYVHG CCCCCHHHHCCCCEEEECCCCCEEEEEEEEEEEEEEEEEECCCCCCCEECCCEEEEEEEC RTQEPLALHVDPPTGWQVTTGLTALPPDPARPQRASFQATDYDELIDCPVECGTHRLLTF CCCCCEEEEECCCCCCEEECCCEECCCCCCCCCCCCCCCCCHHHHHCCCHHCCCEEEEEE TVDDVPHTIAIWGHGNENEERLLADTKRIVEVQRAMFGSLPYRDYTFIVHLTDGKGGGLE EECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC HRNSATNMVDRWTFGEHYERYLSLTSHELFHAWNVKRLRPAPLGPFDYQNENYTRLLWLM CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEE EGATSYYDDLLLVRAGLMSEERYLQKLAEKIVQLQSQPGRRLQSLEQSSFDAWIKFYRPD CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCC ENSINSSISYYLKGALVCWMFDMAIRAQTNNERSFDDVMRYLYQRYPITGPGIPEDGAVL CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEE AAIEAIGGTDNGLRSLYERYVVGVDELDYAAALAVVGLEPRWQYRRPRPDGQPPAWLGVS EEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEECC WKKQGERTIVATVRSDGPAYEAGVYADDELVALDGWRVNEERLQQRLLERQPGDVVRLTL CCCCCCEEEEEEEECCCCCEECCEECCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEE FRGDALIDVPVTLAVAPYDMLSLVNVAAPTAAQLHTRSAWLQRMV EECCEEEECCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MITYTIAMPMPHSHLFHVQIEIERNETGEIRLSLPAWTPGSYMIREFARHVQEFQAVDTQ CEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC GVRLPWRKIRKDCWLVEAGAASRVIVTYKVYAFDLTVRTSHLDGSHGYFNGANVFMYVHG CCCCCHHHHCCCCEEEECCCCCEEEEEEEEEEEEEEEEEECCCCCCCEECCCEEEEEEEC RTQEPLALHVDPPTGWQVTTGLTALPPDPARPQRASFQATDYDELIDCPVECGTHRLLTF CCCCCEEEEECCCCCCEEECCCEECCCCCCCCCCCCCCCCCHHHHHCCCHHCCCEEEEEE TVDDVPHTIAIWGHGNENEERLLADTKRIVEVQRAMFGSLPYRDYTFIVHLTDGKGGGLE EECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC HRNSATNMVDRWTFGEHYERYLSLTSHELFHAWNVKRLRPAPLGPFDYQNENYTRLLWLM CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEE EGATSYYDDLLLVRAGLMSEERYLQKLAEKIVQLQSQPGRRLQSLEQSSFDAWIKFYRPD CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCC ENSINSSISYYLKGALVCWMFDMAIRAQTNNERSFDDVMRYLYQRYPITGPGIPEDGAVL CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEE AAIEAIGGTDNGLRSLYERYVVGVDELDYAAALAVVGLEPRWQYRRPRPDGQPPAWLGVS EEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEECC WKKQGERTIVATVRSDGPAYEAGVYADDELVALDGWRVNEERLQQRLLERQPGDVVRLTL CCCCCCEEEEEEEECCCCCEECCEECCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEE FRGDALIDVPVTLAVAPYDMLSLVNVAAPTAAQLHTRSAWLQRMV EECCEEEECCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA